Protein–RNA interactions for Protein: P06844

SPT3, Protein SPT3, yeastyeast

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPT3P06844 YML009W-BYML009W-B 477 nt19.9■□□□□ 0.78
SPT3P06844 NSR1YGR159C 1245 nt19.86■□□□□ 0.77
SPT3P06844 NOP1YDL014W 984 nt19.23■□□□□ 0.67
SPT3P06844 MDJ1YFL016C 1536 nt17.84■□□□□ 0.45
SPT3P06844 YKL036CYKL036C 393 nt17.62■□□□□ 0.41
SPT3P06844 SRX1YKL086W 384 nt16.82■□□□□ 0.28
SPT3P06844 Q0297Q0297 156 nt16.78■□□□□ 0.28
SPT3P06844 YJL027CYJL027C 417 nt16.45■□□□□ 0.22
SPT3P06844 YCR051WYCR051W 669 nt16■□□□□ 0.15
SPT3P06844 SCS3YGL126W 1143 nt15.96■□□□□ 0.15
SPT3P06844 DBP2YNL112W 1641 nt15.69■□□□□ 0.1
SPT3P06844 TRN1tP(UGG)A 72 nt15.28■□□□□ 0.04
SPT3P06844 SUF9tP(UGG)F 72 nt15.28■□□□□ 0.04
SPT3P06844 SUF8tP(UGG)H 72 nt15.28■□□□□ 0.04
SPT3P06844 tP(UGG)LtP(UGG)L 72 nt15.28■□□□□ 0.04
SPT3P06844 SUF7tP(UGG)M 72 nt15.28■□□□□ 0.04
SPT3P06844 tP(UGG)N1tP(UGG)N1 72 nt15.28■□□□□ 0.04
SPT3P06844 tP(UGG)N2tP(UGG)N2 72 nt15.28■□□□□ 0.04
SPT3P06844 tP(UGG)O1tP(UGG)O1 72 nt15.28■□□□□ 0.04
SPT3P06844 SUF11tP(UGG)O2 72 nt15.28■□□□□ 0.04
SPT3P06844 YOL085CYOL085C 342 nt15.28■□□□□ 0.04
SPT3P06844 CCC1YLR220W 969 nt15.23■□□□□ 0.03
SPT3P06844 YBR190WYBR190W 312 nt15.2■□□□□ 0.02
SPT3P06844 PKP1YIL042C 1185 nt15.14■□□□□ 0.01
SPT3P06844 RPP1BYDL130W 321 nt15.07■□□□□ 0
SPT3P06844 RTC3YHR087W 336 nt14.92□□□□□ -0.02
SPT3P06844 RVS167YDR388W 1449 nt14.7□□□□□ -0.06
SPT3P06844 SCJ1YMR214W 1134 nt14.62□□□□□ -0.07
SPT3P06844 PET122YER153C 765 nt14.45□□□□□ -0.1
SPT3P06844 tP(UGG)O3tP(UGG)O3 72 nt14.44□□□□□ -0.1
SPT3P06844 ATS1YAL020C 1002 nt14.24□□□□□ -0.13
SPT3P06844 SCR1SCR1 522 nt14.23□□□□□ -0.13
SPT3P06844 SHR5YOL110W 714 nt14.15□□□□□ -0.14
SPT3P06844 RRN5YLR141W 1092 nt14.03□□□□□ -0.16
SPT3P06844 YDJ1YNL064C 1230 nt13.94□□□□□ -0.18
SPT3P06844 PUT4YOR348C 1884 nt13.92□□□□□ -0.18
SPT3P06844 URN1YPR152C 1398 nt13.89□□□□□ -0.19
SPT3P06844 DEP1YAL013W 1218 nt13.89□□□□□ -0.19
SPT3P06844 YER088W-BYER088W-B 147 nt13.74□□□□□ -0.21
SPT3P06844 GAR1YHR089C 618 nt13.72□□□□□ -0.21
SPT3P06844 RSB1YOR049C 1065 nt13.7□□□□□ -0.22
SPT3P06844 OPI9YLR338W 858 nt13.68□□□□□ -0.22
SPT3P06844 SAH1YER043C 1350 nt13.68□□□□□ -0.22
SPT3P06844 ARE1YCR048W 1833 nt13.64□□□□□ -0.23
SPT3P06844 RPN10YHR200W 807 nt13.59□□□□□ -0.23
SPT3P06844 YNL208WYNL208W 600 nt13.58□□□□□ -0.24
SPT3P06844 POA1YBR022W 534 nt13.53□□□□□ -0.24
SPT3P06844 YHR049C-AYHR049C-A 297 nt13.48□□□□□ -0.25
SPT3P06844 SSA3YBL075C 1950 nt13.31□□□□□ -0.28
SPT3P06844 PUN1YLR414C 792 nt13.27□□□□□ -0.29
SPT3P06844 TIR1YER011W 765 nt13.24□□□□□ -0.29
SPT3P06844 YJR018WYJR018W 363 nt13.24□□□□□ -0.29
SPT3P06844 BSC6YOL137W 1494 nt13.23□□□□□ -0.29
SPT3P06844 PST2YDR032C 597 nt13.21□□□□□ -0.29
SPT3P06844 PTC2YER089C 1395 nt13.2□□□□□ -0.3
SPT3P06844 BUD23YCR047C 828 nt13.19□□□□□ -0.3
SPT3P06844 SSA1YAL005C 1929 nt13.12□□□□□ -0.31
SPT3P06844 NAB2YGL122C 1578 nt13□□□□□ -0.33
SPT3P06844 YJR120WYJR120W 351 nt12.98□□□□□ -0.33
SPT3P06844 RPP2BYDR382W 333 nt12.91□□□□□ -0.34
SPT3P06844 SRB2YHR041C 633 nt12.89□□□□□ -0.35
SPT3P06844 FPR4YLR449W 1179 nt12.85□□□□□ -0.35
SPT3P06844 DAL1YIR027C 1383 nt12.81□□□□□ -0.36
SPT3P06844 FIS1YIL065C 468 nt12.79□□□□□ -0.36
SPT3P06844 INM2YDR287W 879 nt12.76□□□□□ -0.37
SPT3P06844 SHU1YHL006C 453 nt12.73□□□□□ -0.37
SPT3P06844 PHO4YFR034C 939 nt12.68□□□□□ -0.38
SPT3P06844 WWM1YFL010C 636 nt12.66□□□□□ -0.38
SPT3P06844 SPT5YML010W 3192 nt12.65□□□□□ -0.38
SPT3P06844 YAL037C-BYAL037C-B 975 nt12.65□□□□□ -0.38
SPT3P06844 YBL100CYBL100C 315 nt12.63□□□□□ -0.39
SPT3P06844 BDH2YAL061W 1254 nt12.62□□□□□ -0.39
SPT3P06844 YKL097CYKL097C 411 nt12.61□□□□□ -0.39
SPT3P06844 YPS1YLR120C 1710 nt12.48□□□□□ -0.41
SPT3P06844 FUN26YAL022C 1554 nt12.48□□□□□ -0.41
SPT3P06844 YGR021WYGR021W 873 nt12.47□□□□□ -0.41
SPT3P06844 HOM6YJR139C 1080 nt12.44□□□□□ -0.42
SPT3P06844 TRM9YML014W 840 nt12.44□□□□□ -0.42
SPT3P06844 MEP2YNL142W 1500 nt12.42□□□□□ -0.42
SPT3P06844 YFL021C-AYFL021C-A 855 nt12.4□□□□□ -0.42
SPT3P06844 MNP1YGL068W 585 nt12.4□□□□□ -0.42
SPT3P06844 LSM3YLR438C-A 270 nt12.4□□□□□ -0.42
SPT3P06844 YHR165W-AYHR165W-A 312 nt12.39□□□□□ -0.43
SPT3P06844 YDR095CYDR095C 411 nt12.37□□□□□ -0.43
SPT3P06844 ALF1YNL148C 765 nt12.34□□□□□ -0.43
SPT3P06844 SSA4YER103W 1929 nt12.29□□□□□ -0.44
SPT3P06844 CCT6YDR188W 1641 nt12.28□□□□□ -0.44
SPT3P06844 DCW1YKL046C 1350 nt12.27□□□□□ -0.45
SPT3P06844 RKM5YLR137W 1104 nt12.26□□□□□ -0.45
SPT3P06844 SUF2tP(AGG)C 72 nt12.18□□□□□ -0.46
SPT3P06844 SUF10tP(AGG)N 72 nt12.18□□□□□ -0.46
SPT3P06844 RPP2AYOL039W 321 nt12.17□□□□□ -0.46
SPT3P06844 YOR139CYOR139C 393 nt12.15□□□□□ -0.46
SPT3P06844 PTP1YDL230W 1008 nt12.13□□□□□ -0.47
SPT3P06844 SIS1YNL007C 1059 nt12.13□□□□□ -0.47
SPT3P06844 CAC2YML102W 1407 nt12.1□□□□□ -0.47
SPT3P06844 EMI2YDR516C 1503 nt12.08□□□□□ -0.48
SPT3P06844 NPL3YDR432W 1245 nt12.07□□□□□ -0.48
SPT3P06844 YOL037CYOL037C 354 nt12.05□□□□□ -0.48
SPT3P06844 YMR090WYMR090W 684 nt11.99□□□□□ -0.49
Retrieved 100 of 7,029 protein–RNA pairs in 38.3 ms