RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	BCK1	Q01389	1478 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	NDI1	P32340	513 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	YJL213W	P40896	331 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	YDL186W	P48568	277 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	VAM3	Q12241	283 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	ERP4	Q12450	207 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	YBR298C-A	Q8TGK4	73 aa		4.07	□□□□□ -1.76
NIT3	YLR351C	GDH1	P07262	454 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	LPD1	P09624	499 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	YAR066W	P0CX18	203 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	YHR214W	P0CX19	203 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	MCK1	P21965	375 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	CLB1	P24868	471 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	YCR100C	P25606	316 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	URA7	P28274	579 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	CRM1	P30822	1084 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	TFB1	P32776	642 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	RPS0B	P46654	252 aa	Known RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	KTR5	P53966	522 aa	Predicted RBP	4.06	□□□□□ -1.76
NIT3	YLR351C	ODC1	Q03028	310 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	YDR387C	Q04162	555 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	CTF3	Q12748	733 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	SMC6	Q12749	1114 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	YMR230W-A	Q3E7B5	62 aa		4.06	□□□□□ -1.76
NIT3	YLR351C	RAD9	P14737	1309 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	YLR278C	Q05854	1341 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	HEM2	P05373	342 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	SEC63	P14906	663 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	PUT3	P25502	979 aa	Predicted RBP	4.05	□□□□□ -1.76
NIT3	YLR351C	KRE2	P27809	442 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	SIN4	P32259	974 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	HIR2	P32480	875 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	PXA2	P34230	853 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	SRP72	P38688	640 aa	Known RBP	4.05	□□□□□ -1.76
NIT3	YLR351C	SAS2	P40963	338 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	CAK1	P43568	368 aa	Predicted RBP	4.05	□□□□□ -1.76
NIT3	YLR351C	TRS85	P46944	698 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	YJR011C	P47086	261 aa	Predicted RBP	4.05	□□□□□ -1.76
NIT3	YLR351C	ECM27	P47144	725 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	PCP1	P53259	346 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	YIF1	P53845	314 aa	Known RBP	4.05	□□□□□ -1.76
NIT3	YLR351C	YLR345W	Q06137	509 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	NUP192	P47054	1683 aa		4.05	□□□□□ -1.76
NIT3	YLR351C	KRE5	P22023	1365 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	HIS4	P00815	799 aa	Known RBP	4.04	□□□□□ -1.76
NIT3	YLR351C	APE2	P32454	952 aa	Known RBP	4.04	□□□□□ -1.76
NIT3	YLR351C	ECM25	P32525	599 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	GLC7	P32598	312 aa	Known RBP	4.04	□□□□□ -1.76
NIT3	YLR351C	VMA8	P32610	256 aa	Known RBP	4.04	□□□□□ -1.76
NIT3	YLR351C	RFC3	P38629	340 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	YHR054C	P38780	354 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	GCD10	P41814	478 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	AVT4	P50944	713 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	YML6	P51998	286 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	YIP1	P53039	248 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	ARK1	P53974	638 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	PIR3	Q03180	325 aa		4.04	□□□□□ -1.76
NIT3	YLR351C	RKM1	Q08961	583 aa	Predicted RBP	4.04	□□□□□ -1.76
NIT3	YLR351C	PHO2	P07269	559 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	RPI1	P23250	407 aa	Known RBP	4.03	□□□□□ -1.76
NIT3	YLR351C	CPR2	P23285	205 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	RHB1	P25378	209 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	GEX1	P25596	615 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	ERV1	P27882	189 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	BEM1	P29366	551 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	YCR041W	P37265	110 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	MMS4	P38257	691 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	YBP1	P38315	674 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	ZIM17	P42844	174 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	CAF40	P53829	373 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	HOT1	Q03213	719 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	MDM30	Q05930	598 aa		4.03	□□□□□ -1.76
NIT3	YLR351C	URA4	P20051	364 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	APE3	P37302	537 aa	Known RBP	4.02	□□□□□ -1.77
NIT3	YLR351C	IDP2	P41939	412 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	RRT5	P43607	289 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	POP6	P53218	158 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	ART5	P53244	586 aa	Known RBP	4.02	□□□□□ -1.77
NIT3	YLR351C	RPT4	P53549	437 aa	Known RBP	4.02	□□□□□ -1.77
NIT3	YLR351C	ACL4	Q03771	387 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	YMR130W	Q04223	302 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	RTT103	Q05543	409 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	MUM3	Q08750	479 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	MED2	Q12124	431 aa		4.02	□□□□□ -1.77
NIT3	YLR351C	HIP1	P06775	603 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	RNA14	P25298	677 aa	Known RBP	4.01	□□□□□ -1.77
NIT3	YLR351C	BRF1	P29056	596 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	AGA1	P32323	725 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	SLM4	P38247	162 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	CCT4	P39078	528 aa	Known RBP	4.01	□□□□□ -1.77
NIT3	YLR351C	YJL132W	P47014	750 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	SSN8	P47821	323 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	TCB2	P48231	1178 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	MSO1	P53604	210 aa	Known RBP	4.01	□□□□□ -1.77
NIT3	YLR351C	AIM32	Q04689	311 aa		4.01	□□□□□ -1.77
NIT3	YLR351C	SCEI	P03882	235 aa		4	□□□□□ -1.77
NIT3	YLR351C	CPR1	P14832	162 aa	Known RBP	4	□□□□□ -1.77
NIT3	YLR351C	PRP16	P15938	1071 aa	Predicted RBP	4	□□□□□ -1.77
NIT3	YLR351C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
NIT3	YLR351C	MRP4	P32902	394 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms