RNA–Protein interactions for RNA: YDL179W

PCL9, Transcript of Cyclin, yeast

Gene PCL9, Length 915 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL9	YDL179W	ARO3	P14843	370 aa	Known RBP	4.58	□□□□□ -1.68
PCL9	YDL179W	CTR86	P25355	563 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	ITR1	P30605	584 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	PCA1	P38360	1216 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	MST28	P39552	234 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	LAM5	P43560	674 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	MSO1	P53604	210 aa	Known RBP	4.58	□□□□□ -1.68
PCL9	YDL179W	GOR1	P53839	350 aa		4.58	□□□□□ -1.68
PCL9	YDL179W	TEF1	P02994	458 aa	Known RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	ARG4	P04076	463 aa	Predicted RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	RRP4	P38792	359 aa	Known RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	VHS2	P40463	436 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	LCB2	P40970	561 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	SSN8	P47821	323 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	TOM22	P49334	152 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	YNR048W	P53740	393 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	TAF12	Q03761	539 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	SXM1	Q04175	944 aa	Known RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	RTT103	Q05543	409 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	THP3	Q12049	470 aa	Known RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	SPE3	Q12074	293 aa	Known RBP	4.57	□□□□□ -1.68
PCL9	YDL179W	YLL056C	Q12177	298 aa		4.57	□□□□□ -1.68
PCL9	YDL179W	ILV5	P06168	395 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	PMR1	P13586	950 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	LSB5	P25369	354 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	CDC60	P26637	1090 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	LTV1	P34078	463 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	ASC1	P38011	319 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	RIB5	P38145	238 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	ZTA1	P38230	334 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	YBP1	P38315	674 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	TIF5	P38431	405 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	OST1	P41543	476 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	YFL067W	P43537	175 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	PHB2	P50085	310 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	GIP3	Q03016	1276 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	BET5	Q03630	159 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	YTH1	Q06102	208 aa	Predicted RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	SGT1	Q08446	395 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	SKI7	Q08491	747 aa	Predicted RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	PAR32	Q12515	295 aa	Known RBP	4.56	□□□□□ -1.68
PCL9	YDL179W	YCL021W-A	Q96VH3	125 aa		4.56	□□□□□ -1.68
PCL9	YDL179W	COX3	P00420	269 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	ADE4	P04046	510 aa	Known RBP	4.55	□□□□□ -1.68
PCL9	YDL179W	HEM15	P16622	393 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	SWH1	P35845	1188 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	CCT4	P39078	528 aa	Known RBP	4.55	□□□□□ -1.68
PCL9	YDL179W	YAL037W	P39728	267 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	GPI15	P53961	229 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	RSN1	Q03516	953 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	RMD5	Q12508	421 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	RAD61	Q99359	647 aa		4.55	□□□□□ -1.68
PCL9	YDL179W	MIX23	P38162	196 aa		4.54	□□□□□ -1.68
PCL9	YDL179W	YHR218W	P38899	603 aa		4.54	□□□□□ -1.68
PCL9	YDL179W	GDI1	P39958	451 aa	Known RBP	4.54	□□□□□ -1.68
PCL9	YDL179W	IBD2	P53892	351 aa		4.54	□□□□□ -1.68
PCL9	YDL179W	YLR456W	Q06199	204 aa		4.54	□□□□□ -1.68
PCL9	YDL179W	SLY1	P22213	666 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	CPR3	P25719	182 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	RIM1	P32445	135 aa	Known RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	MDL1	P33310	695 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	HEL1	P36113	551 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	FAD1	P38913	306 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	FAA2	P39518	744 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	EFM4	P40516	257 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	YJL055W	P47044	245 aa		4.53	□□□□□ -1.68
PCL9	YDL179W	PRP42	Q03776	544 aa	Known RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	RPN9	Q04062	393 aa	Known RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	RPN5	Q12250	445 aa	Known RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	SNU66	Q12420	587 aa	Predicted RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	RRP12	Q12754	1228 aa	Known RBP	4.53	□□□□□ -1.68
PCL9	YDL179W	SPS22	P25380	463 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	NIP1	P32497	812 aa	Known RBP	4.52	□□□□□ -1.69
PCL9	YDL179W	PIB2	P53191	635 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	HXT11	P54862	567 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	YMR181C	Q03231	154 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	YLR108C	Q12259	485 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	YER078W-A	Q3E7A2	54 aa		4.52	□□□□□ -1.69
PCL9	YDL179W	RPL1A	P0CX43	217 aa	Known RBP	4.51	□□□□□ -1.69
PCL9	YDL179W	RPL1B	P0CX44	217 aa	Known RBP	4.51	□□□□□ -1.69
PCL9	YDL179W	SPO12	P17123	173 aa		4.51	□□□□□ -1.69
PCL9	YDL179W	JEM1	P40358	645 aa		4.51	□□□□□ -1.69
PCL9	YDL179W	BOR1	P53838	576 aa		4.51	□□□□□ -1.69
PCL9	YDL179W	IMP4	P53941	290 aa	Known RBP	4.51	□□□□□ -1.69
PCL9	YDL179W	ERO1	Q03103	563 aa		4.51	□□□□□ -1.69
PCL9	YDL179W	SNT309	Q06091	175 aa	Predicted RBP	4.51	□□□□□ -1.69
PCL9	YDL179W	ATG34	Q12292	412 aa		4.51	□□□□□ -1.69
PCL9	YDL179W	RAD57	P25301	460 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	RGT1	P32862	1170 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	KKQ8	P36004	724 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	OLA1	P38219	394 aa	Known RBP	4.5	□□□□□ -1.69
PCL9	YDL179W	PCF11	P39081	626 aa	Predicted RBP	4.5	□□□□□ -1.69
PCL9	YDL179W	GAT2	P40209	560 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	YIL067C	P40514	678 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	YPS6	P40583	537 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	PPM1	Q04081	328 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	URH1	Q04179	340 aa		4.5	□□□□□ -1.69
PCL9	YDL179W	SNX3	Q08826	162 aa	Known RBP	4.5	□□□□□ -1.69
PCL9	YDL179W	PDE2	P06776	526 aa		4.49	□□□□□ -1.69
PCL9	YDL179W	CPR4	P25334	318 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms