RNA–Protein interactions for RNA: YDL179W

PCL9, Transcript of Cyclin, yeastyeast

Gene PCL9, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCL9YDL179W DRS1P32892 752 aaKnown RBP16.17■□□□□ 0.18
PCL9YDL179W MTC1P47018 478 aaKnown RBP15.93■□□□□ 0.14
PCL9YDL179W BFR2Q06631 534 aaKnown RBP14.04□□□□□ -0.16
PCL9YDL179W DIP2Q12220 943 aaPredicted RBP13.73□□□□□ -0.21
PCL9YDL179W AVT3P36062 692 aa13.56□□□□□ -0.24
PCL9YDL179W TFA1P36100 482 aa13.3□□□□□ -0.28
PCL9YDL179W FAP1P53971 965 aa12.96□□□□□ -0.33
PCL9YDL179W ISW2Q08773 1120 aa12.94□□□□□ -0.34
PCL9YDL179W RSE1Q04693 1361 aaKnown RBP12.91□□□□□ -0.34
PCL9YDL179W RPG1P38249 964 aaKnown RBP12.79□□□□□ -0.36
PCL9YDL179W PRI1P10363 409 aa12.72□□□□□ -0.37
PCL9YDL179W AAD16Q02895 342 aa12.51□□□□□ -0.41
PCL9YDL179W RPL17AP05740 184 aaKnown RBP12.42□□□□□ -0.42
PCL9YDL179W RPL17BP46990 184 aaKnown RBP12.42□□□□□ -0.42
PCL9YDL179W REB1P21538 810 aa12.25□□□□□ -0.45
PCL9YDL179W TSR3Q12094 313 aaKnown RBP12.12□□□□□ -0.47
PCL9YDL179W PRY3P47033 881 aa12.11□□□□□ -0.47
PCL9YDL179W SPT21P35209 758 aa11.93□□□□□ -0.5
PCL9YDL179W RIM101P33400 625 aa11.83□□□□□ -0.52
PCL9YDL179W MRPL32P25348 183 aa11.65□□□□□ -0.54
PCL9YDL179W YKR023WP36119 530 aaKnown RBP11.55□□□□□ -0.56
PCL9YDL179W PTP3P40048 928 aa11.54□□□□□ -0.56
PCL9YDL179W OXP1P28273 1286 aa11.49□□□□□ -0.57
PCL9YDL179W YCK3P39962 524 aa11.43□□□□□ -0.58
PCL9YDL179W RQC2Q12532 1038 aaKnown RBP11.42□□□□□ -0.58
PCL9YDL179W HAA1Q12753 694 aaKnown RBP11.42□□□□□ -0.58
PCL9YDL179W SSP1P38871 571 aa11.38□□□□□ -0.59
PCL9YDL179W YAH1Q12184 172 aaKnown RBP11.35□□□□□ -0.59
PCL9YDL179W YIL055CP40523 627 aaKnown RBP11.34□□□□□ -0.59
PCL9YDL179W HOP09932 586 aa11.33□□□□□ -0.6
PCL9YDL179W TFC8Q12308 588 aa11.31□□□□□ -0.6
PCL9YDL179W CDC27P38042 758 aa11.27□□□□□ -0.61
PCL9YDL179W DCD1P06773 312 aa11.24□□□□□ -0.61
PCL9YDL179W YLR271WQ06152 274 aa11.19□□□□□ -0.62
PCL9YDL179W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.18□□□□□ -0.62not detected
PCL9YDL179W RSM7P47150 247 aa11.15□□□□□ -0.62
PCL9YDL179W DMA1P38823 416 aa11.04□□□□□ -0.64
PCL9YDL179W BCH2P36122 765 aa11□□□□□ -0.65
PCL9YDL179W MGA2P40578 1113 aa10.96□□□□□ -0.65
PCL9YDL179W AI2P03876 854 aa10.94□□□□□ -0.66
PCL9YDL179W BBC1P47068 1157 aa10.86□□□□□ -0.67
PCL9YDL179W PSD2P53037 1138 aaKnown RBP10.85□□□□□ -0.67
PCL9YDL179W CST9Q06032 482 aa10.85□□□□□ -0.67
PCL9YDL179W YGL015CP33199 130 aa10.82□□□□□ -0.68
PCL9YDL179W EPS1P40557 701 aa10.81□□□□□ -0.68
PCL9YDL179W SCY1P53009 804 aa10.8□□□□□ -0.68
PCL9YDL179W MAP2P38174 421 aaKnown RBP10.77□□□□□ -0.69
PCL9YDL179W UBP10P53874 792 aaPredicted RBP10.75□□□□□ -0.69
PCL9YDL179W BDF1P35817 686 aa10.74□□□□□ -0.69
PCL9YDL179W MRM1P25270 412 aa10.62□□□□□ -0.71
PCL9YDL179W SLX5P32828 619 aaKnown RBP10.57□□□□□ -0.72
PCL9YDL179W RTG3P38165 486 aa10.49□□□□□ -0.73
PCL9YDL179W RAM2P29703 316 aa10.47□□□□□ -0.73
PCL9YDL179W RCR1P38212 213 aa10.47□□□□□ -0.73
PCL9YDL179W SAS10Q12136 610 aaPredicted RBP10.36□□□□□ -0.75
PCL9YDL179W VPS29P38759 282 aa10.35□□□□□ -0.75
PCL9YDL179W TIF4632P39936 914 aaKnown RBP10.34□□□□□ -0.75
PCL9YDL179W SET1P38827 1080 aaKnown RBP10.29□□□□□ -0.76
PCL9YDL179W MAK11P20484 414 aaKnown RBP10.28□□□□□ -0.76
PCL9YDL179W TGL3P40308 642 aa10.27□□□□□ -0.77
PCL9YDL179W YMR1P47147 688 aaKnown RBP RIP-Chip data10.26□□□□□ -0.77not detected
PCL9YDL179W DBP1P24784 617 aaKnown RBP10.19□□□□□ -0.78
PCL9YDL179W STS1P38637 319 aa10.18□□□□□ -0.78
PCL9YDL179W YFR006WP43590 535 aa10.18□□□□□ -0.78
PCL9YDL179W YOR238WQ08634 303 aa10.18□□□□□ -0.78
PCL9YDL179W COQ8P27697 501 aa10.15□□□□□ -0.78
PCL9YDL179W NSR1P27476 414 aaKnown RBP RIP-Chip data10.14□□□□□ -0.79not detected
PCL9YDL179W YAP5P40574 245 aa10.14□□□□□ -0.79
PCL9YDL179W MIF2P35201 549 aa10.12□□□□□ -0.79
PCL9YDL179W IFH1P39520 1085 aa10.12□□□□□ -0.79
PCL9YDL179W VPS70P47161 811 aa10.12□□□□□ -0.79
PCL9YDL179W YPR148CQ06523 435 aa10.1□□□□□ -0.79
PCL9YDL179W PIB1Q06651 286 aa10.1□□□□□ -0.79
PCL9YDL179W CKB1P43639 278 aa10.06□□□□□ -0.8
PCL9YDL179W NOP53Q12080 455 aaKnown RBP10.06□□□□□ -0.8
PCL9YDL179W EDS1P38073 919 aa10.05□□□□□ -0.8
PCL9YDL179W LEO1P38439 464 aa10.05□□□□□ -0.8
PCL9YDL179W LEU3P08638 886 aa10.04□□□□□ -0.8
PCL9YDL179W SPB4P25808 606 aaPredicted RBP10.01□□□□□ -0.81
PCL9YDL179W PTC3P34221 468 aaKnown RBP9.98□□□□□ -0.81
PCL9YDL179W VMA1P17255 1071 aaKnown RBP9.97□□□□□ -0.81
PCL9YDL179W MST1P07236 462 aa9.96□□□□□ -0.82
PCL9YDL179W GTT3P39996 337 aa9.88□□□□□ -0.83
PCL9YDL179W PBS2P08018 668 aa9.87□□□□□ -0.83
PCL9YDL179W REF2P42073 533 aaPredicted RBP9.86□□□□□ -0.83
PCL9YDL179W SAM3Q08986 587 aa9.85□□□□□ -0.83
PCL9YDL179W ATH1P48016 1211 aa9.84□□□□□ -0.83
PCL9YDL179W GRE2Q12068 342 aaKnown RBP9.84□□□□□ -0.83
PCL9YDL179W DSF2P38213 736 aa9.83□□□□□ -0.84
PCL9YDL179W GUT1P32190 709 aa9.81□□□□□ -0.84
PCL9YDL179W RPN1P38764 993 aaKnown RBP9.81□□□□□ -0.84
PCL9YDL179W GYP5Q12344 894 aa9.81□□□□□ -0.84
PCL9YDL179W YOL036WQ08206 761 aa9.74□□□□□ -0.85
PCL9YDL179W MAM3Q12296 706 aa9.74□□□□□ -0.85
PCL9YDL179W SET4P42948 560 aa9.73□□□□□ -0.85
PCL9YDL179W DCW1P36091 449 aa9.72□□□□□ -0.85
PCL9YDL179W VHR2P40041 505 aa9.72□□□□□ -0.85
PCL9YDL179W WSC3Q12215 556 aa9.72□□□□□ -0.85
PCL9YDL179W COX6P00427 148 aa9.71□□□□□ -0.86
PCL9YDL179W MAK21Q12176 1025 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms