RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C COS5P47187 383 aa1.45□□□□□ -2.18
VPS55YJR044C ERG26P53199 349 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C PRM1P53835 661 aa1.45□□□□□ -2.18
VPS55YJR044C ARP5P53946 755 aa1.45□□□□□ -2.18
VPS55YJR044C RSM23Q01163 450 aa1.45□□□□□ -2.18
VPS55YJR044C RBA50Q04418 439 aa1.45□□□□□ -2.18
VPS55YJR044C SOV1Q04748 898 aa1.45□□□□□ -2.18
VPS55YJR044C DCS1Q06151 350 aa1.45□□□□□ -2.18
VPS55YJR044C COS7Q07788 383 aa1.45□□□□□ -2.18
VPS55YJR044C THP1Q08231 455 aa1.45□□□□□ -2.18
VPS55YJR044C ETT1Q08421 412 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C RDR1Q08904 546 aa1.45□□□□□ -2.18
VPS55YJR044C KEL3Q08979 651 aaPredicted RBP1.45□□□□□ -2.18
VPS55YJR044C RTC5Q12108 567 aaKnown RBP1.45□□□□□ -2.18
VPS55YJR044C YIL002W-AQ3E7Z5 69 aa1.45□□□□□ -2.18
VPS55YJR044C MTR10Q99189 972 aa1.45□□□□□ -2.18
VPS55YJR044C COR1P07256 457 aa1.44□□□□□ -2.18
VPS55YJR044C GAL7P08431 366 aa1.44□□□□□ -2.18
VPS55YJR044C RPL1AP0CX43 217 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C RPL1BP0CX44 217 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C PMR1P13586 950 aa1.44□□□□□ -2.18
VPS55YJR044C KRS1P15180 591 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C BEM1P29366 551 aa1.44□□□□□ -2.18
VPS55YJR044C YEL043WP32618 956 aa1.44□□□□□ -2.18
VPS55YJR044C SHP1P34223 423 aa1.44□□□□□ -2.18
VPS55YJR044C HEL1P36113 551 aa1.44□□□□□ -2.18
VPS55YJR044C NUP133P36161 1157 aa1.44□□□□□ -2.18
VPS55YJR044C BNA4P38169 460 aa1.44□□□□□ -2.18
VPS55YJR044C KAP104P38217 918 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C PFF1P38244 976 aa1.44□□□□□ -2.18
VPS55YJR044C SIF2P38262 535 aa1.44□□□□□ -2.18
VPS55YJR044C OSW5P40219 148 aa1.44□□□□□ -2.18
VPS55YJR044C RPS0BP46654 252 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C YHC3P47040 408 aa1.44□□□□□ -2.18
VPS55YJR044C ALT2P52892 507 aa1.44□□□□□ -2.18
VPS55YJR044C YGL108CP53139 140 aa1.44□□□□□ -2.18
VPS55YJR044C MLC1P53141 149 aa1.44□□□□□ -2.18
VPS55YJR044C YGL082WP53155 381 aa1.44□□□□□ -2.18
VPS55YJR044C RPT4P53549 437 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C YNR068CP53754 272 aa1.44□□□□□ -2.18
VPS55YJR044C DSL1P53847 754 aa1.44□□□□□ -2.18
VPS55YJR044C TDA7P53882 636 aaPredicted RBP1.44□□□□□ -2.18
VPS55YJR044C SHR3Q02774 210 aa1.44□□□□□ -2.18
VPS55YJR044C GIP3Q03016 1276 aa1.44□□□□□ -2.18
VPS55YJR044C ACL4Q03771 387 aa1.44□□□□□ -2.18
VPS55YJR044C YMR160WQ03823 816 aa1.44□□□□□ -2.18
VPS55YJR044C RPN9Q04062 393 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C RBS1Q05672 457 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C ADE13Q05911 482 aaKnown RBP1.44□□□□□ -2.18
VPS55YJR044C MMR1Q06324 491 aa1.44□□□□□ -2.18
VPS55YJR044C VAM3Q12241 283 aa1.44□□□□□ -2.18
VPS55YJR044C GLE1Q12315 538 aa1.44□□□□□ -2.18
VPS55YJR044C APC2Q12440 853 aa1.44□□□□□ -2.18
VPS55YJR044C SKS1Q12505 502 aa1.44□□□□□ -2.18
VPS55YJR044C NBL1Q3E7Y6 73 aa1.44□□□□□ -2.18
VPS55YJR044C TY1B-AO13527 1196 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C GPH1P06738 902 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C TAL1P15019 335 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C PUT4P15380 627 aa1.43□□□□□ -2.18
VPS55YJR044C BUD5P25300 642 aaPredicted RBP1.43□□□□□ -2.18
VPS55YJR044C RHB1P25378 209 aa1.43□□□□□ -2.18
VPS55YJR044C PHO91P27514 894 aa1.43□□□□□ -2.18
VPS55YJR044C POT1P27796 417 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
VPS55YJR044C YIM1P28625 365 aa1.43□□□□□ -2.18
VPS55YJR044C ACH1P32316 526 aa1.43□□□□□ -2.18
VPS55YJR044C YNK1P36010 153 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C PHD1P36093 366 aa1.43□□□□□ -2.18
VPS55YJR044C MIC60P36112 540 aa1.43□□□□□ -2.18
VPS55YJR044C MRPL40P36534 297 aa1.43□□□□□ -2.18
VPS55YJR044C OLA1P38219 394 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C ZTA1P38230 334 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C YSW1P38280 609 aa1.43□□□□□ -2.18
VPS55YJR044C MNL1P38888 796 aa1.43□□□□□ -2.18
VPS55YJR044C VPS45P38932 577 aa1.43□□□□□ -2.18
VPS55YJR044C MBB1P39534 108 aa1.43□□□□□ -2.18
VPS55YJR044C RPR2P40571 144 aa1.43□□□□□ -2.18
VPS55YJR044C YJL213WP40896 331 aa1.43□□□□□ -2.18
VPS55YJR044C CHS6P40955 746 aa1.43□□□□□ -2.18
VPS55YJR044C RPN11P43588 306 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C RPA34P47006 233 aaPredicted RBP1.43□□□□□ -2.18
VPS55YJR044C IKS1P47042 667 aa1.43□□□□□ -2.18
VPS55YJR044C COS10P52924 374 aa1.43□□□□□ -2.18
VPS55YJR044C YIP5P53108 310 aa1.43□□□□□ -2.18
VPS55YJR044C ZPR1P53303 486 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C SMM1P53720 384 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C PDR16P53860 351 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C OCA2P53949 197 aa1.43□□□□□ -2.18
VPS55YJR044C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.43□□□□□ -2.18not detected
VPS55YJR044C COQ9Q05779 260 aa1.43□□□□□ -2.18
VPS55YJR044C DBP9Q06218 594 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C YFH1Q07540 174 aa1.43□□□□□ -2.18
VPS55YJR044C NOP6Q07623 225 aaKnown RBP1.43□□□□□ -2.18
VPS55YJR044C PML1Q07930 204 aaPredicted RBP1.43□□□□□ -2.18
VPS55YJR044C REX4Q08237 289 aa1.43□□□□□ -2.18
VPS55YJR044C ATG9Q12142 997 aa1.43□□□□□ -2.18
VPS55YJR044C RAD61Q99359 647 aa1.43□□□□□ -2.18
VPS55YJR044C STE2D6VTK4 431 aa1.42□□□□□ -2.18
VPS55YJR044C CAR1P00812 333 aaKnown RBP1.42□□□□□ -2.18
VPS55YJR044C LEU4P06208 619 aaKnown RBP1.42□□□□□ -2.18
VPS55YJR044C CDC21P06785 304 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms