RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W YDR286CQ05530 114 aa3.47□□□□□ -1.85
PTI1YGR156W RRP45Q05636 305 aaKnown RBP3.47□□□□□ -1.85
PTI1YGR156W SIL1Q08199 421 aa3.47□□□□□ -1.85
PTI1YGR156W APL5Q08951 932 aaKnown RBP3.47□□□□□ -1.85
PTI1YGR156W SPT7P35177 1332 aa3.46□□□□□ -1.85
PTI1YGR156W RPL42AP0CX27 106 aaKnown RBP3.46□□□□□ -1.86
PTI1YGR156W RPL42BP0CX28 106 aaKnown RBP3.46□□□□□ -1.86
PTI1YGR156W PEP5P12868 1029 aa3.46□□□□□ -1.86
PTI1YGR156W KRE2P27809 442 aa3.46□□□□□ -1.86
PTI1YGR156W SNC1P31109 117 aa3.46□□□□□ -1.86
PTI1YGR156W NIP1P32497 812 aaKnown RBP3.46□□□□□ -1.86
PTI1YGR156W RPS0AP32905 252 aaKnown RBP3.46□□□□□ -1.86
PTI1YGR156W NTC20P38302 140 aaPredicted RBP3.46□□□□□ -1.86
PTI1YGR156W TFG2P41896 400 aaPredicted RBP3.46□□□□□ -1.86
PTI1YGR156W YGL138CP53122 345 aa3.46□□□□□ -1.86
PTI1YGR156W BUD32P53323 261 aa3.46□□□□□ -1.86
PTI1YGR156W KTR5P53966 522 aaPredicted RBP3.46□□□□□ -1.86
PTI1YGR156W RHO4Q00246 291 aa3.46□□□□□ -1.86
PTI1YGR156W NUP100Q02629 959 aa3.46□□□□□ -1.86
PTI1YGR156W GYL1Q04322 720 aa3.46□□□□□ -1.86
PTI1YGR156W FMP42Q04991 504 aa3.46□□□□□ -1.86
PTI1YGR156W RSF1Q05043 376 aa3.46□□□□□ -1.86
PTI1YGR156W POS5Q06892 414 aa3.46□□□□□ -1.86
PTI1YGR156W YDL057WQ07379 328 aa3.46□□□□□ -1.86
PTI1YGR156W THP1Q08231 455 aa3.46□□□□□ -1.86
PTI1YGR156W CTF3Q12748 733 aa3.46□□□□□ -1.86
PTI1YGR156W BRR1Q99177 341 aaPredicted RBP3.46□□□□□ -1.86
PTI1YGR156W YRF1-2P40105 1681 aa3.46□□□□□ -1.86
PTI1YGR156W RPB8P20436 146 aa3.45□□□□□ -1.86
PTI1YGR156W ATP11P32453 318 aa3.45□□□□□ -1.86
PTI1YGR156W GYP6P32806 458 aa3.45□□□□□ -1.86
PTI1YGR156W SDS24P38314 527 aa3.45□□□□□ -1.86
PTI1YGR156W BZZ1P38822 633 aa3.45□□□□□ -1.86
PTI1YGR156W CUL3P53202 744 aa3.45□□□□□ -1.86
PTI1YGR156W SMM1P53720 384 aaKnown RBP3.45□□□□□ -1.86
PTI1YGR156W MDM30Q05930 598 aa3.45□□□□□ -1.86
PTI1YGR156W MCP2Q06567 569 aa3.45□□□□□ -1.86
PTI1YGR156W VAM3Q12241 283 aa3.45□□□□□ -1.86
PTI1YGR156W RAV1P47104 1357 aa3.45□□□□□ -1.86
PTI1YGR156W GCN2P15442 1659 aa3.45□□□□□ -1.86
PTI1YGR156W ATP10P18496 279 aa3.44□□□□□ -1.86
PTI1YGR156W CLN1P20437 546 aa3.44□□□□□ -1.86
PTI1YGR156W POT1P27796 417 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
PTI1YGR156W SIN4P32259 974 aa3.44□□□□□ -1.86
PTI1YGR156W AFG1P32317 509 aa3.44□□□□□ -1.86
PTI1YGR156W HIR2P32480 875 aa3.44□□□□□ -1.86
PTI1YGR156W SPC34P36131 295 aa3.44□□□□□ -1.86
PTI1YGR156W ROT2P38138 954 aa3.44□□□□□ -1.86
PTI1YGR156W BNA4P38169 460 aa3.44□□□□□ -1.86
PTI1YGR156W CCT2P39076 527 aaKnown RBP3.44□□□□□ -1.86
PTI1YGR156W PCL6P40038 420 aa3.44□□□□□ -1.86
PTI1YGR156W YJL132WP47014 750 aa3.44□□□□□ -1.86
PTI1YGR156W ALT2P52892 507 aa3.44□□□□□ -1.86
PTI1YGR156W SHR3Q02774 210 aa3.44□□□□□ -1.86
PTI1YGR156W YPL107WQ02873 248 aa3.44□□□□□ -1.86
PTI1YGR156W PRP42Q03776 544 aaKnown RBP3.44□□□□□ -1.86
PTI1YGR156W HEL2Q05580 639 aaKnown RBP3.44□□□□□ -1.86
PTI1YGR156W YDL218WQ07629 317 aa3.44□□□□□ -1.86
PTI1YGR156W KEL3Q08979 651 aaPredicted RBP3.44□□□□□ -1.86
PTI1YGR156W SMF3Q12078 473 aaPredicted RBP3.44□□□□□ -1.86
PTI1YGR156W TIP41Q12199 356 aa3.44□□□□□ -1.86
PTI1YGR156W NFI1Q12216 726 aa3.44□□□□□ -1.86
PTI1YGR156W YMR230W-AQ3E7B5 62 aa3.44□□□□□ -1.86
PTI1YGR156W RAD9P14737 1309 aa3.44□□□□□ -1.86
PTI1YGR156W LPD1P09624 499 aaKnown RBP3.43□□□□□ -1.86
PTI1YGR156W TYR1P20049 452 aa3.43□□□□□ -1.86
PTI1YGR156W GID7P25569 745 aa3.43□□□□□ -1.86
PTI1YGR156W SPC110P32380 944 aa3.43□□□□□ -1.86
PTI1YGR156W PRP21P32524 280 aaPredicted RBP3.43□□□□□ -1.86
PTI1YGR156W SWH1P35845 1188 aa3.43□□□□□ -1.86
PTI1YGR156W UIP5P36137 443 aa3.43□□□□□ -1.86
PTI1YGR156W YBR139WP38109 508 aa3.43□□□□□ -1.86
PTI1YGR156W YHR054CP38780 354 aa3.43□□□□□ -1.86
PTI1YGR156W FYV8P46949 817 aaKnown RBP3.43□□□□□ -1.86
PTI1YGR156W MLC1P53141 149 aa3.43□□□□□ -1.86
PTI1YGR156W ZPR1P53303 486 aaKnown RBP3.43□□□□□ -1.86
PTI1YGR156W DUG3P53871 357 aa3.43□□□□□ -1.86
PTI1YGR156W EOS1P53938 366 aa3.43□□□□□ -1.86
PTI1YGR156W SMA1Q02651 245 aa3.43□□□□□ -1.86
PTI1YGR156W CTL1Q03220 320 aaKnown RBP3.43□□□□□ -1.86
PTI1YGR156W BNA5Q05979 453 aa3.43□□□□□ -1.86
PTI1YGR156W YLR456WQ06199 204 aa3.43□□□□□ -1.86
PTI1YGR156W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
PTI1YGR156W CUE5Q08412 411 aaKnown RBP3.43□□□□□ -1.86
PTI1YGR156W MED2Q12124 431 aa3.43□□□□□ -1.86
PTI1YGR156W HSP42Q12329 375 aa3.43□□□□□ -1.86
PTI1YGR156W FRE6Q12473 712 aa3.43□□□□□ -1.86
PTI1YGR156W COX3P00420 269 aa3.42□□□□□ -1.86
PTI1YGR156W BAR1P12630 587 aa3.42□□□□□ -1.86
PTI1YGR156W ARO3P14843 370 aaKnown RBP3.42□□□□□ -1.86
PTI1YGR156W SPO7P18410 259 aa3.42□□□□□ -1.86
PTI1YGR156W DAP2P18962 818 aa3.42□□□□□ -1.86
PTI1YGR156W URA4P20051 364 aa3.42□□□□□ -1.86
PTI1YGR156W BRF1P29056 596 aa3.42□□□□□ -1.86
PTI1YGR156W MCM4P30665 933 aaKnown RBP3.42□□□□□ -1.86
PTI1YGR156W RPN2P32565 945 aaKnown RBP3.42□□□□□ -1.86
PTI1YGR156W UTR4P32626 227 aa3.42□□□□□ -1.86
PTI1YGR156W YPK3P38070 525 aa3.42□□□□□ -1.86
PTI1YGR156W ARA1P38115 344 aa3.42□□□□□ -1.86
PTI1YGR156W YND1P40009 630 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms