Protein–RNA interactions for Protein: P12868

PEP5, E3 ubiquitin-protein ligase PEP5, yeastyeast

Predictions only

Length 1,029 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEP5P12868 NSR1YGR159C 1245 nt20.95■□□□□ 0.94
PEP5P12868 YML009W-BYML009W-B 477 nt20.86■□□□□ 0.93
PEP5P12868 NOP1YDL014W 984 nt20.07■□□□□ 0.8
PEP5P12868 MDJ1YFL016C 1536 nt19.02■□□□□ 0.64
PEP5P12868 YKL036CYKL036C 393 nt18.2■□□□□ 0.5
PEP5P12868 SRX1YKL086W 384 nt17.52■□□□□ 0.4
PEP5P12868 YJL027CYJL027C 417 nt17.48■□□□□ 0.39
PEP5P12868 Q0297Q0297 156 nt17.42■□□□□ 0.38
PEP5P12868 YCR051WYCR051W 669 nt16.68■□□□□ 0.26
PEP5P12868 DBP2YNL112W 1641 nt16.64■□□□□ 0.25
PEP5P12868 SCS3YGL126W 1143 nt16.4■□□□□ 0.22
PEP5P12868 YBR190WYBR190W 312 nt16.22■□□□□ 0.19
PEP5P12868 TRN1tP(UGG)A 72 nt16.05■□□□□ 0.16
PEP5P12868 SUF9tP(UGG)F 72 nt16.05■□□□□ 0.16
PEP5P12868 SUF8tP(UGG)H 72 nt16.05■□□□□ 0.16
PEP5P12868 tP(UGG)LtP(UGG)L 72 nt16.05■□□□□ 0.16
PEP5P12868 SUF7tP(UGG)M 72 nt16.05■□□□□ 0.16
PEP5P12868 tP(UGG)N1tP(UGG)N1 72 nt16.05■□□□□ 0.16
PEP5P12868 tP(UGG)N2tP(UGG)N2 72 nt16.05■□□□□ 0.16
PEP5P12868 tP(UGG)O1tP(UGG)O1 72 nt16.05■□□□□ 0.16
PEP5P12868 SUF11tP(UGG)O2 72 nt16.05■□□□□ 0.16
PEP5P12868 CCC1YLR220W 969 nt16.01■□□□□ 0.15
PEP5P12868 RTC3YHR087W 336 nt15.96■□□□□ 0.15
PEP5P12868 YOL085CYOL085C 342 nt15.8■□□□□ 0.12
PEP5P12868 PKP1YIL042C 1185 nt15.68■□□□□ 0.1
PEP5P12868 RPP1BYDL130W 321 nt15.66■□□□□ 0.1
PEP5P12868 RVS167YDR388W 1449 nt15.56■□□□□ 0.08
PEP5P12868 SCJ1YMR214W 1134 nt15.43■□□□□ 0.06
PEP5P12868 tP(UGG)O3tP(UGG)O3 72 nt15.1■□□□□ 0.01
PEP5P12868 PET122YER153C 765 nt15.04■□□□□ -0
PEP5P12868 PUT4YOR348C 1884 nt15.02■□□□□ -0
PEP5P12868 SHR5YOL110W 714 nt14.92□□□□□ -0.02
PEP5P12868 SSA3YBL075C 1950 nt14.84□□□□□ -0.03
PEP5P12868 URN1YPR152C 1398 nt14.77□□□□□ -0.04
PEP5P12868 SCR1SCR1 522 nt14.76□□□□□ -0.05
PEP5P12868 DEP1YAL013W 1218 nt14.73□□□□□ -0.05
PEP5P12868 ARE1YCR048W 1833 nt14.66□□□□□ -0.06
PEP5P12868 SAH1YER043C 1350 nt14.64□□□□□ -0.07
PEP5P12868 POA1YBR022W 534 nt14.6□□□□□ -0.07
PEP5P12868 RRN5YLR141W 1092 nt14.58□□□□□ -0.08
PEP5P12868 ATS1YAL020C 1002 nt14.57□□□□□ -0.08
PEP5P12868 OPI9YLR338W 858 nt14.57□□□□□ -0.08
PEP5P12868 YDJ1YNL064C 1230 nt14.55□□□□□ -0.08
PEP5P12868 YHR049C-AYHR049C-A 297 nt14.5□□□□□ -0.09
PEP5P12868 RPN10YHR200W 807 nt14.41□□□□□ -0.1
PEP5P12868 GAR1YHR089C 618 nt14.39□□□□□ -0.11
PEP5P12868 YNL208WYNL208W 600 nt14.37□□□□□ -0.11
PEP5P12868 BSC6YOL137W 1494 nt14.31□□□□□ -0.12
PEP5P12868 YER088W-BYER088W-B 147 nt14.28□□□□□ -0.12
PEP5P12868 RSB1YOR049C 1065 nt14.2□□□□□ -0.14
PEP5P12868 BUD23YCR047C 828 nt14.18□□□□□ -0.14
PEP5P12868 PUN1YLR414C 792 nt14.13□□□□□ -0.15
PEP5P12868 PTC2YER089C 1395 nt14.09□□□□□ -0.15
PEP5P12868 YJR018WYJR018W 363 nt14.04□□□□□ -0.16
PEP5P12868 NAB2YGL122C 1578 nt13.91□□□□□ -0.18
PEP5P12868 TIR1YER011W 765 nt13.88□□□□□ -0.19
PEP5P12868 SPT5YML010W 3192 nt13.81□□□□□ -0.2
PEP5P12868 SSA1YAL005C 1929 nt13.8□□□□□ -0.2
PEP5P12868 YJR120WYJR120W 351 nt13.74□□□□□ -0.21
PEP5P12868 FPR4YLR449W 1179 nt13.73□□□□□ -0.21
PEP5P12868 FIS1YIL065C 468 nt13.67□□□□□ -0.22
PEP5P12868 RPP2BYDR382W 333 nt13.66□□□□□ -0.22
PEP5P12868 DAL1YIR027C 1383 nt13.66□□□□□ -0.22
PEP5P12868 INM2YDR287W 879 nt13.56□□□□□ -0.24
PEP5P12868 PHO4YFR034C 939 nt13.55□□□□□ -0.24
PEP5P12868 SRB2YHR041C 633 nt13.55□□□□□ -0.24
PEP5P12868 PST2YDR032C 597 nt13.53□□□□□ -0.24
PEP5P12868 SSA4YER103W 1929 nt13.52□□□□□ -0.24
PEP5P12868 MEP2YNL142W 1500 nt13.44□□□□□ -0.26
PEP5P12868 YBL100CYBL100C 315 nt13.41□□□□□ -0.26
PEP5P12868 YPS1YLR120C 1710 nt13.39□□□□□ -0.27
PEP5P12868 YHR165W-AYHR165W-A 312 nt13.32□□□□□ -0.28
PEP5P12868 BDH2YAL061W 1254 nt13.31□□□□□ -0.28
PEP5P12868 DCW1YKL046C 1350 nt13.27□□□□□ -0.29
PEP5P12868 FUN26YAL022C 1554 nt13.24□□□□□ -0.29
PEP5P12868 WWM1YFL010C 636 nt13.24□□□□□ -0.29
PEP5P12868 YDR095CYDR095C 411 nt13.23□□□□□ -0.29
PEP5P12868 TRM9YML014W 840 nt13.15□□□□□ -0.3
PEP5P12868 ALF1YNL148C 765 nt13.13□□□□□ -0.31
PEP5P12868 SHU1YHL006C 453 nt13.1□□□□□ -0.31
PEP5P12868 YAL037C-BYAL037C-B 975 nt13.09□□□□□ -0.31
PEP5P12868 EMI2YDR516C 1503 nt13.06□□□□□ -0.32
PEP5P12868 LSM3YLR438C-A 270 nt13.05□□□□□ -0.32
PEP5P12868 RPP2AYOL039W 321 nt13.01□□□□□ -0.33
PEP5P12868 BDF1YLR399C 2061 nt13□□□□□ -0.33
PEP5P12868 CAC2YML102W 1407 nt12.99□□□□□ -0.33
PEP5P12868 PTP1YDL230W 1008 nt12.99□□□□□ -0.33
PEP5P12868 CCT6YDR188W 1641 nt12.99□□□□□ -0.33
PEP5P12868 YGR021WYGR021W 873 nt12.98□□□□□ -0.33
PEP5P12868 YMR090WYMR090W 684 nt12.97□□□□□ -0.33
PEP5P12868 YFL021C-AYFL021C-A 855 nt12.96□□□□□ -0.33
PEP5P12868 HOM6YJR139C 1080 nt12.95□□□□□ -0.34
PEP5P12868 YDL221WYDL221W 552 nt12.92□□□□□ -0.34
PEP5P12868 YBR220CYBR220C 1683 nt12.92□□□□□ -0.34
PEP5P12868 SUF2tP(AGG)C 72 nt12.91□□□□□ -0.34
PEP5P12868 SUF10tP(AGG)N 72 nt12.91□□□□□ -0.34
PEP5P12868 MNP1YGL068W 585 nt12.89□□□□□ -0.35
PEP5P12868 SIS1YNL007C 1059 nt12.89□□□□□ -0.35
PEP5P12868 YKL097CYKL097C 411 nt12.85□□□□□ -0.35
PEP5P12868 SDH1YKL148C 1923 nt12.82□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 25.6 ms