RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C REG1Q00816 1014 aa3.7□□□□□ -1.82
OTU1YFL044C RLI1Q03195 608 aaKnown RBP3.7□□□□□ -1.82
OTU1YFL044C EMI1Q04406 187 aa3.7□□□□□ -1.82
OTU1YFL044C UFO1Q04511 668 aa3.7□□□□□ -1.82
OTU1YFL044C ARP9Q05123 467 aa3.7□□□□□ -1.82
OTU1YFL044C YLR030WQ07967 263 aa3.7□□□□□ -1.82
OTU1YFL044C PUS9Q12069 462 aa3.7□□□□□ -1.82
OTU1YFL044C CHS5Q12114 671 aaKnown RBP3.7□□□□□ -1.82
OTU1YFL044C COX17Q12287 69 aa3.7□□□□□ -1.82
OTU1YFL044C ZRT2Q12436 422 aa3.7□□□□□ -1.82
OTU1YFL044C YKL033W-AQ86ZR7 236 aa3.7□□□□□ -1.82
OTU1YFL044C IPP1P00817 287 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C FUM1P08417 488 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C MET8P15807 274 aa3.69□□□□□ -1.82
OTU1YFL044C PRP28P23394 588 aa3.69□□□□□ -1.82
OTU1YFL044C YCR006CP25350 157 aa3.69□□□□□ -1.82
OTU1YFL044C HXT1P32465 570 aa3.69□□□□□ -1.82
OTU1YFL044C IMP3P32899 183 aaPredicted RBP3.69□□□□□ -1.82
OTU1YFL044C SKN1P33336 771 aa3.69□□□□□ -1.82
OTU1YFL044C YBL055CP34220 418 aaPredicted RBP3.69□□□□□ -1.82
OTU1YFL044C MRPL36P36531 177 aa3.69□□□□□ -1.82
OTU1YFL044C LDB7P38210 180 aa3.69□□□□□ -1.82
OTU1YFL044C HRB1P38922 454 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
OTU1YFL044C YMR124WP39523 943 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C RGI2P40188 164 aa3.69□□□□□ -1.82
OTU1YFL044C LRO1P40345 661 aa3.69□□□□□ -1.82
OTU1YFL044C CAB2P40506 365 aa3.69□□□□□ -1.82
OTU1YFL044C IME4P41833 600 aa3.69□□□□□ -1.82
OTU1YFL044C UBX6P47049 396 aa3.69□□□□□ -1.82
OTU1YFL044C TEL2P53038 688 aa3.69□□□□□ -1.82
OTU1YFL044C RBG2P53295 368 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C TIM13P53299 105 aa3.69□□□□□ -1.82
OTU1YFL044C YPR003CP53394 754 aa3.69□□□□□ -1.82
OTU1YFL044C FRE4P53746 719 aa3.69□□□□□ -1.82
OTU1YFL044C EFM6P53970 246 aa3.69□□□□□ -1.82
OTU1YFL044C NUP100Q02629 959 aa3.69□□□□□ -1.82
OTU1YFL044C TRS23Q03784 219 aa3.69□□□□□ -1.82
OTU1YFL044C VHS1Q03785 461 aa3.69□□□□□ -1.82
OTU1YFL044C ARX1Q03862 593 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C AIM41Q12032 185 aa3.69□□□□□ -1.82
OTU1YFL044C YDR018CQ12185 396 aa3.69□□□□□ -1.82
OTU1YFL044C GLE1Q12315 538 aa3.69□□□□□ -1.82
OTU1YFL044C GTT2Q12390 233 aa3.69□□□□□ -1.82
OTU1YFL044C RRP12Q12754 1228 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C HSH49Q99181 213 aaPredicted RBP3.69□□□□□ -1.82
OTU1YFL044C SLH1P53327 1967 aaKnown RBP3.69□□□□□ -1.82
OTU1YFL044C SEM1O94742 89 aa3.68□□□□□ -1.82
OTU1YFL044C RAD10P06838 210 aa3.68□□□□□ -1.82
OTU1YFL044C ERG11P10614 530 aa3.68□□□□□ -1.82
OTU1YFL044C VPS34P22543 875 aa3.68□□□□□ -1.82
OTU1YFL044C CMK1P27466 446 aaKnown RBP3.68□□□□□ -1.82
OTU1YFL044C MSP1P28737 362 aa3.68□□□□□ -1.82
OTU1YFL044C TEF4P36008 412 aaKnown RBP3.68□□□□□ -1.82
OTU1YFL044C GND1P38720 489 aaKnown RBP3.68□□□□□ -1.82
OTU1YFL044C PCL5P38794 229 aa3.68□□□□□ -1.82
OTU1YFL044C RTT107P38850 1070 aa3.68□□□□□ -1.82
OTU1YFL044C LYS1P38998 373 aaRIP-Chip data3.68□□□□□ -1.82not detected
OTU1YFL044C YEL073CP39974 107 aa3.68□□□□□ -1.82
OTU1YFL044C RIC1P40395 1056 aa3.68□□□□□ -1.82
OTU1YFL044C TES1P41903 349 aaKnown RBP3.68□□□□□ -1.82
OTU1YFL044C ALK1P43633 760 aaKnown RBP3.68□□□□□ -1.82
OTU1YFL044C IMA1P53051 589 aa3.68□□□□□ -1.82
OTU1YFL044C TIM10P87108 93 aa3.68□□□□□ -1.82
OTU1YFL044C TDA9Q04545 1251 aa3.68□□□□□ -1.82
OTU1YFL044C GRS2Q06817 618 aa3.68□□□□□ -1.82
OTU1YFL044C PFA4Q12006 378 aa3.68□□□□□ -1.82
OTU1YFL044C ATG9Q12142 997 aa3.68□□□□□ -1.82
OTU1YFL044C YOR012WQ12351 137 aa3.68□□□□□ -1.82
OTU1YFL044C AVL9Q12500 764 aa3.68□□□□□ -1.82
OTU1YFL044C DYN1P36022 4092 aa3.68□□□□□ -1.82
OTU1YFL044C YLR462WO13556 202 aa3.67□□□□□ -1.82
OTU1YFL044C SIR3P06701 978 aa3.67□□□□□ -1.82
OTU1YFL044C PRP2P20095 876 aaPredicted RBP3.67□□□□□ -1.82
OTU1YFL044C SEC62P21825 274 aa3.67□□□□□ -1.82
OTU1YFL044C CNS1P33313 385 aa3.67□□□□□ -1.82
OTU1YFL044C PRP18P33411 251 aaPredicted RBP3.67□□□□□ -1.82
OTU1YFL044C STB6P36085 766 aa3.67□□□□□ -1.82
OTU1YFL044C NTR2P36118 322 aaPredicted RBP3.67□□□□□ -1.82
OTU1YFL044C MRPL10P36520 322 aa3.67□□□□□ -1.82
OTU1YFL044C TRM7P38238 310 aaKnown RBP3.67□□□□□ -1.82
OTU1YFL044C YSW1P38280 609 aa3.67□□□□□ -1.82
OTU1YFL044C YHL049CP38722 271 aa3.67□□□□□ -1.82
OTU1YFL044C YFL064CP43540 174 aa3.67□□□□□ -1.82
OTU1YFL044C MPS3P47069 682 aa3.67□□□□□ -1.82
OTU1YFL044C BRO1P48582 844 aa3.67□□□□□ -1.82
OTU1YFL044C YML6P51998 286 aa3.67□□□□□ -1.82
OTU1YFL044C KAP114P53067 1004 aa3.67□□□□□ -1.82
OTU1YFL044C BTN2P53286 410 aa3.67□□□□□ -1.82
OTU1YFL044C SSL2Q00578 843 aa3.67□□□□□ -1.82
OTU1YFL044C TIM44Q01852 431 aa3.67□□□□□ -1.82
OTU1YFL044C ATG21Q02887 496 aa3.67□□□□□ -1.82
OTU1YFL044C FDC1Q03034 503 aa3.67□□□□□ -1.82
OTU1YFL044C SPC19Q03954 165 aa3.67□□□□□ -1.82
OTU1YFL044C YDR278CQ05612 105 aa3.67□□□□□ -1.82
OTU1YFL044C USV1Q12132 391 aa3.67□□□□□ -1.82
OTU1YFL044C LEU9Q12166 604 aaKnown RBP3.67□□□□□ -1.82
OTU1YFL044C ACF2Q12168 779 aa3.67□□□□□ -1.82
OTU1YFL044C MSL5Q12186 476 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
OTU1YFL044C YBL111CQ3E7Y5 667 aa3.67□□□□□ -1.82
OTU1YFL044C FUR1P18562 216 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms