RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C LSC1P53598 329 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C GIR2Q03768 265 aaPredicted RBP3.24□□□□□ -1.89
SDO1YLR022C NUP53Q03790 475 aa3.24□□□□□ -1.89
SDO1YLR022C FUS2Q05670 677 aa3.24□□□□□ -1.89
SDO1YLR022C VID22Q05934 901 aa3.24□□□□□ -1.89
SDO1YLR022C ATX2Q12067 313 aa3.24□□□□□ -1.89
SDO1YLR022C RRP6Q12149 733 aaKnown RBP3.24□□□□□ -1.89
SDO1YLR022C ARP7Q12406 477 aa3.24□□□□□ -1.89
SDO1YLR022C CHS1P08004 1131 aa3.23□□□□□ -1.89
SDO1YLR022C PGI1P12709 554 aaKnown RBP3.23□□□□□ -1.89
SDO1YLR022C UBP13P38187 747 aa3.23□□□□□ -1.89
SDO1YLR022C FLO5P38894 1075 aa3.23□□□□□ -1.89
SDO1YLR022C RSM25P40496 264 aa3.23□□□□□ -1.89
SDO1YLR022C YJL107CP42947 387 aa3.23□□□□□ -1.89
SDO1YLR022C ASG7P46993 209 aa3.23□□□□□ -1.89
SDO1YLR022C MDV1P47025 714 aa3.23□□□□□ -1.89
SDO1YLR022C IKS1P47042 667 aa3.23□□□□□ -1.89
SDO1YLR022C LYS20P48570 428 aaKnown RBP3.23□□□□□ -1.89
SDO1YLR022C CDC45Q08032 650 aa3.23□□□□□ -1.89
SDO1YLR022C PFA4Q12006 378 aa3.23□□□□□ -1.89
SDO1YLR022C SRO7Q12038 1033 aa3.23□□□□□ -1.89
SDO1YLR022C NBP2Q12163 236 aa3.23□□□□□ -1.89
SDO1YLR022C SUC2P00724 532 aa3.22□□□□□ -1.89
SDO1YLR022C PTC6P25646 442 aa3.22□□□□□ -1.89
SDO1YLR022C PTP2P29461 750 aa3.22□□□□□ -1.89
SDO1YLR022C SSH4P32343 579 aa3.22□□□□□ -1.89
SDO1YLR022C BMH2P34730 273 aaKnown RBP3.22□□□□□ -1.89
SDO1YLR022C JNM1P36224 373 aa3.22□□□□□ -1.89
SDO1YLR022C TAE1P38340 232 aa3.22□□□□□ -1.89
SDO1YLR022C STT3P39007 718 aaKnown RBP3.22□□□□□ -1.89
SDO1YLR022C IES5P40060 125 aa3.22□□□□□ -1.89
SDO1YLR022C CDC1P40986 491 aa3.22□□□□□ -1.89
SDO1YLR022C TOF1P53840 1238 aa3.22□□□□□ -1.89
SDO1YLR022C TGL2P54857 326 aa3.22□□□□□ -1.89
SDO1YLR022C NUP116Q02630 1113 aa3.22□□□□□ -1.89
SDO1YLR022C PIR3Q03180 325 aa3.22□□□□□ -1.89
SDO1YLR022C YMR018WQ04364 514 aa3.22□□□□□ -1.89
SDO1YLR022C SRL1Q08673 210 aa3.22□□□□□ -1.89
SDO1YLR022C NDD1Q08887 554 aa3.22□□□□□ -1.89
SDO1YLR022C DDC1Q08949 612 aa3.22□□□□□ -1.89
SDO1YLR022C CEX1Q12453 761 aa3.22□□□□□ -1.89
SDO1YLR022C ILV2P07342 687 aaKnown RBP3.21□□□□□ -1.9
SDO1YLR022C RED1P14291 827 aa3.21□□□□□ -1.9
SDO1YLR022C CNA1P23287 553 aa3.21□□□□□ -1.9
SDO1YLR022C LRE1P25579 583 aaKnown RBP3.21□□□□□ -1.9
SDO1YLR022C ATG15P25641 520 aa3.21□□□□□ -1.9
SDO1YLR022C SIP1P32578 815 aa3.21□□□□□ -1.9
SDO1YLR022C NIC96P34077 839 aa3.21□□□□□ -1.9
SDO1YLR022C GND1P38720 489 aaKnown RBP3.21□□□□□ -1.9
SDO1YLR022C ARN1P38731 627 aa3.21□□□□□ -1.9
SDO1YLR022C TPA1P40032 644 aaKnown RBP3.21□□□□□ -1.9
SDO1YLR022C YIL152WP40455 235 aa3.21□□□□□ -1.9
SDO1YLR022C HSH155P49955 971 aaKnown RBP3.21□□□□□ -1.9
SDO1YLR022C CBK1P53894 756 aa3.21□□□□□ -1.9
SDO1YLR022C MET14Q02196 202 aa3.21□□□□□ -1.9
SDO1YLR022C RPC11Q04307 110 aaPredicted RBP3.21□□□□□ -1.9
SDO1YLR022C BSC6Q08280 497 aa3.21□□□□□ -1.9
SDO1YLR022C PER33Q12144 273 aa3.21□□□□□ -1.9
SDO1YLR022C HSC82P15108 705 aaKnown RBP3.2□□□□□ -1.9
SDO1YLR022C GFD2P25370 566 aaKnown RBP3.2□□□□□ -1.9
SDO1YLR022C HES1P35843 434 aa3.2□□□□□ -1.9
SDO1YLR022C KAP123P40069 1113 aaKnown RBP3.2□□□□□ -1.9
SDO1YLR022C SMC3P47037 1230 aa3.2□□□□□ -1.9
SDO1YLR022C MAD3P47074 515 aa3.2□□□□□ -1.9
SDO1YLR022C YJR054WP47114 497 aa3.2□□□□□ -1.9
SDO1YLR022C YJR079WP47126 109 aa3.2□□□□□ -1.9
SDO1YLR022C COG7P53195 279 aa3.2□□□□□ -1.9
SDO1YLR022C CUR1Q06469 252 aa3.2□□□□□ -1.9
SDO1YLR022C MLC2Q06580 163 aa3.2□□□□□ -1.9
SDO1YLR022C BUD7Q08754 746 aa3.2□□□□□ -1.9
SDO1YLR022C UBX3Q12229 455 aa3.2□□□□□ -1.9
SDO1YLR022C RRI1Q12468 440 aa3.2□□□□□ -1.9
SDO1YLR022C DYN1P36022 4092 aa3.19□□□□□ -1.9
SDO1YLR022C GAL1P04385 528 aa3.19□□□□□ -1.9
SDO1YLR022C NAT1P12945 854 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C SEC62P21825 274 aa3.19□□□□□ -1.9
SDO1YLR022C LAC1P28496 418 aa3.19□□□□□ -1.9
SDO1YLR022C EFB1P32471 206 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C TAF14P35189 244 aa3.19□□□□□ -1.9
SDO1YLR022C APM3P38153 483 aa3.19□□□□□ -1.9
SDO1YLR022C SMF1P38925 575 aa3.19□□□□□ -1.9
SDO1YLR022C LSM4P40070 187 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C DSE1P40077 573 aa3.19□□□□□ -1.9
SDO1YLR022C SPG5P42933 373 aa3.19□□□□□ -1.9
SDO1YLR022C EPL1P43572 832 aa3.19□□□□□ -1.9
SDO1YLR022C ALK1P43633 760 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C PRP24P49960 444 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C EAF7P53911 425 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C BOP3P53958 396 aa3.19□□□□□ -1.9
SDO1YLR022C MOT3P54785 490 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C SVL3Q03088 825 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C MZM1Q03429 123 aaPredicted RBP3.19□□□□□ -1.9
SDO1YLR022C GTB1Q04924 702 aa3.19□□□□□ -1.9
SDO1YLR022C EIS1Q05050 843 aaKnown RBP3.19□□□□□ -1.9
SDO1YLR022C DIC1Q06143 298 aa3.19□□□□□ -1.9
SDO1YLR022C SNA4Q07549 140 aa3.19□□□□□ -1.9
SDO1YLR022C MLH2Q07980 695 aa3.19□□□□□ -1.9
SDO1YLR022C TIP41Q12199 356 aa3.19□□□□□ -1.9
SDO1YLR022C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9 RIP-Chip
SDO1YLR022C INH1P01097 85 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms