Protein–RNA interactions for Protein: Q03790

NUP53, Nucleoporin NUP53, yeastyeast

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP53Q03790 YML009W-BYML009W-B 477 nt18.77■□□□□ 0.6
NUP53Q03790 NSR1YGR159C 1245 nt18.52■□□□□ 0.56
NUP53Q03790 NOP1YDL014W 984 nt18.44■□□□□ 0.54
NUP53Q03790 YKL036CYKL036C 393 nt17.22■□□□□ 0.35
NUP53Q03790 Q0297Q0297 156 nt16.22■□□□□ 0.19
NUP53Q03790 YJL027CYJL027C 417 nt16.1■□□□□ 0.17
NUP53Q03790 SRX1YKL086W 384 nt16.1■□□□□ 0.17
NUP53Q03790 MDJ1YFL016C 1536 nt16.09■□□□□ 0.17
NUP53Q03790 SCS3YGL126W 1143 nt15.77■□□□□ 0.12
NUP53Q03790 YCR051WYCR051W 669 nt15.23■□□□□ 0.03
NUP53Q03790 YOL085CYOL085C 342 nt14.89□□□□□ -0.03
NUP53Q03790 PKP1YIL042C 1185 nt14.56□□□□□ -0.08
NUP53Q03790 RPP1BYDL130W 321 nt14.54□□□□□ -0.08
NUP53Q03790 SCJ1YMR214W 1134 nt14.41□□□□□ -0.1
NUP53Q03790 TRN1tP(UGG)A 72 nt14.38□□□□□ -0.11
NUP53Q03790 SUF9tP(UGG)F 72 nt14.38□□□□□ -0.11
NUP53Q03790 SUF8tP(UGG)H 72 nt14.38□□□□□ -0.11
NUP53Q03790 tP(UGG)LtP(UGG)L 72 nt14.38□□□□□ -0.11
NUP53Q03790 SUF7tP(UGG)M 72 nt14.38□□□□□ -0.11
NUP53Q03790 tP(UGG)N1tP(UGG)N1 72 nt14.38□□□□□ -0.11
NUP53Q03790 tP(UGG)N2tP(UGG)N2 72 nt14.38□□□□□ -0.11
NUP53Q03790 tP(UGG)O1tP(UGG)O1 72 nt14.38□□□□□ -0.11
NUP53Q03790 SUF11tP(UGG)O2 72 nt14.38□□□□□ -0.11
NUP53Q03790 DBP2YNL112W 1641 nt14.37□□□□□ -0.11
NUP53Q03790 ATS1YAL020C 1002 nt14.2□□□□□ -0.14
NUP53Q03790 CCC1YLR220W 969 nt14.17□□□□□ -0.14
NUP53Q03790 PET122YER153C 765 nt13.81□□□□□ -0.2
NUP53Q03790 SCR1SCR1 522 nt13.79□□□□□ -0.2
NUP53Q03790 YBR190WYBR190W 312 nt13.74□□□□□ -0.21
NUP53Q03790 tP(UGG)O3tP(UGG)O3 72 nt13.68□□□□□ -0.22
NUP53Q03790 RVS167YDR388W 1449 nt13.64□□□□□ -0.23
NUP53Q03790 RRN5YLR141W 1092 nt13.44□□□□□ -0.26
NUP53Q03790 RTC3YHR087W 336 nt13.38□□□□□ -0.27
NUP53Q03790 YDJ1YNL064C 1230 nt13.29□□□□□ -0.28
NUP53Q03790 RSB1YOR049C 1065 nt13.24□□□□□ -0.29
NUP53Q03790 SHR5YOL110W 714 nt13.2□□□□□ -0.3
NUP53Q03790 YER088W-BYER088W-B 147 nt13.19□□□□□ -0.3
NUP53Q03790 PST2YDR032C 597 nt13.12□□□□□ -0.31
NUP53Q03790 GAR1YHR089C 618 nt12.86□□□□□ -0.35
NUP53Q03790 YKL097CYKL097C 411 nt12.73□□□□□ -0.37
NUP53Q03790 DEP1YAL013W 1218 nt12.64□□□□□ -0.39
NUP53Q03790 URN1YPR152C 1398 nt12.64□□□□□ -0.39
NUP53Q03790 RPN10YHR200W 807 nt12.58□□□□□ -0.4
NUP53Q03790 YNL208WYNL208W 600 nt12.57□□□□□ -0.4
NUP53Q03790 SHU1YHL006C 453 nt12.48□□□□□ -0.41
NUP53Q03790 TIR1YER011W 765 nt12.46□□□□□ -0.41
NUP53Q03790 OPI9YLR338W 858 nt12.44□□□□□ -0.42
NUP53Q03790 SAH1YER043C 1350 nt12.24□□□□□ -0.45
NUP53Q03790 PUT4YOR348C 1884 nt12.24□□□□□ -0.45
NUP53Q03790 SSA1YAL005C 1929 nt12.23□□□□□ -0.45
NUP53Q03790 YAL037C-BYAL037C-B 975 nt12.15□□□□□ -0.46
NUP53Q03790 YOR139CYOR139C 393 nt12.14□□□□□ -0.47
NUP53Q03790 PUN1YLR414C 792 nt12.1□□□□□ -0.47
NUP53Q03790 YJR018WYJR018W 363 nt12.09□□□□□ -0.47
NUP53Q03790 ARE1YCR048W 1833 nt12.09□□□□□ -0.47
NUP53Q03790 SSA3YBL075C 1950 nt12.01□□□□□ -0.49
NUP53Q03790 YGR021WYGR021W 873 nt12.01□□□□□ -0.49
NUP53Q03790 SRB2YHR041C 633 nt12.01□□□□□ -0.49
NUP53Q03790 NPL3YDR432W 1245 nt12□□□□□ -0.49
NUP53Q03790 RPP2BYDR382W 333 nt11.95□□□□□ -0.5
NUP53Q03790 HOM6YJR139C 1080 nt11.94□□□□□ -0.5
NUP53Q03790 YJR120WYJR120W 351 nt11.93□□□□□ -0.5
NUP53Q03790 WWM1YFL010C 636 nt11.91□□□□□ -0.5
NUP53Q03790 YHR049C-AYHR049C-A 297 nt11.91□□□□□ -0.5
NUP53Q03790 YOL037CYOL037C 354 nt11.87□□□□□ -0.51
NUP53Q03790 PTC2YER089C 1395 nt11.85□□□□□ -0.51
NUP53Q03790 MNP1YGL068W 585 nt11.85□□□□□ -0.51
NUP53Q03790 POA1YBR022W 534 nt11.84□□□□□ -0.51
NUP53Q03790 YFL021C-AYFL021C-A 855 nt11.79□□□□□ -0.52
NUP53Q03790 RKM5YLR137W 1104 nt11.76□□□□□ -0.53
NUP53Q03790 BDH2YAL061W 1254 nt11.75□□□□□ -0.53
NUP53Q03790 NAB2YGL122C 1578 nt11.71□□□□□ -0.54
NUP53Q03790 LSM3YLR438C-A 270 nt11.68□□□□□ -0.54
NUP53Q03790 INM2YDR287W 879 nt11.67□□□□□ -0.54
NUP53Q03790 tM(CAU)CtM(CAU)C 72 nt11.67□□□□□ -0.54
NUP53Q03790 IMT4tM(CAU)E 72 nt11.67□□□□□ -0.54
NUP53Q03790 IMT3tM(CAU)J3 72 nt11.67□□□□□ -0.54
NUP53Q03790 IMT1tM(CAU)O1 72 nt11.67□□□□□ -0.54
NUP53Q03790 IMT2tM(CAU)P 72 nt11.67□□□□□ -0.54
NUP53Q03790 BUD23YCR047C 828 nt11.64□□□□□ -0.55
NUP53Q03790 DAL1YIR027C 1383 nt11.6□□□□□ -0.55
NUP53Q03790 YBL100CYBL100C 315 nt11.55□□□□□ -0.56
NUP53Q03790 YLR281CYLR281C 468 nt11.54□□□□□ -0.56
NUP53Q03790 BSC6YOL137W 1494 nt11.54□□□□□ -0.56
NUP53Q03790 FIS1YIL065C 468 nt11.52□□□□□ -0.57
NUP53Q03790 FPR4YLR449W 1179 nt11.49□□□□□ -0.57
NUP53Q03790 PUS2YGL063W 1113 nt11.48□□□□□ -0.57
NUP53Q03790 TRM9YML014W 840 nt11.48□□□□□ -0.57
NUP53Q03790 PHO4YFR034C 939 nt11.45□□□□□ -0.58
NUP53Q03790 WHI5YOR083W 888 nt11.44□□□□□ -0.58
NUP53Q03790 FUN26YAL022C 1554 nt11.43□□□□□ -0.58
NUP53Q03790 CCT6YDR188W 1641 nt11.36□□□□□ -0.59
NUP53Q03790 MOT3YMR070W 1473 nt11.31□□□□□ -0.6
NUP53Q03790 IMP2'YIL154C 1041 nt11.29□□□□□ -0.6
NUP53Q03790 SUF2tP(AGG)C 72 nt11.27□□□□□ -0.61
NUP53Q03790 SUF10tP(AGG)N 72 nt11.27□□□□□ -0.61
NUP53Q03790 YLR154C-GYLR154C-G 150 nt11.25□□□□□ -0.61
NUP53Q03790 DSK2YMR276W 1122 nt11.25□□□□□ -0.61
NUP53Q03790 Q0182Q0182 405 nt11.24□□□□□ -0.61
NUP53Q03790 ALF1YNL148C 765 nt11.22□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 19.7 ms