RNA–Protein interactions for RNA: YOL034W

SMC5, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC5, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC5YOL034W ENT2Q05785 613 aa8.25□□□□□ -1.09
SMC5YOL034W TSR4P25040 408 aa8.24□□□□□ -1.09
SMC5YOL034W HOS2P53096 452 aaPredicted RBP8.24□□□□□ -1.09
SMC5YOL034W VPS5Q92331 675 aa8.24□□□□□ -1.09
SMC5YOL034W CHD1P32657 1468 aa8.24□□□□□ -1.09
SMC5YOL034W FAF1P40546 346 aaPredicted RBP8.24□□□□□ -1.09
SMC5YOL034W CTF4Q01454 927 aa8.24□□□□□ -1.09
SMC5YOL034W PES4P39684 611 aa8.23□□□□□ -1.09
SMC5YOL034W COG4Q06096 861 aa8.23□□□□□ -1.09
SMC5YOL034W RIX7Q07844 837 aaKnown RBP8.23□□□□□ -1.09
SMC5YOL034W SUP35P05453 685 aaKnown RBP8.23□□□□□ -1.09
SMC5YOL034W PPH3P32345 308 aa8.23□□□□□ -1.09
SMC5YOL034W SLD2P34252 453 aa8.23□□□□□ -1.09
SMC5YOL034W YOL057WQ08225 711 aa8.23□□□□□ -1.09
SMC5YOL034W STE5P32917 917 aa8.23□□□□□ -1.09
SMC5YOL034W MAL31P38156 614 aa8.23□□□□□ -1.09
SMC5YOL034W VID30P53076 958 aa8.22□□□□□ -1.09
SMC5YOL034W SUB2Q07478 446 aaKnown RBP8.22□□□□□ -1.09
SMC5YOL034W MSM1P22438 575 aa8.22□□□□□ -1.09
SMC5YOL034W RSC8P43609 557 aaKnown RBP8.22□□□□□ -1.09
SMC5YOL034W JIP5Q06214 492 aaPredicted RBP8.22□□□□□ -1.09
SMC5YOL034W SGT2Q12118 346 aaKnown RBP8.22□□□□□ -1.09
SMC5YOL034W DNM1P54861 757 aa8.21□□□□□ -1.09
SMC5YOL034W ESF2P53743 316 aaKnown RBP8.21□□□□□ -1.1
SMC5YOL034W MRF1P30775 413 aaPredicted RBP8.2□□□□□ -1.1
SMC5YOL034W BNI5P53890 448 aaKnown RBP8.2□□□□□ -1.1
SMC5YOL034W VTC3Q02725 835 aa8.2□□□□□ -1.1
SMC5YOL034W RPL5P26321 297 aaKnown RBP8.19□□□□□ -1.1
SMC5YOL034W CST6P40535 587 aa8.19□□□□□ -1.1
SMC5YOL034W MDM1Q01846 1127 aa8.19□□□□□ -1.1
SMC5YOL034W BFA1P47113 574 aa8.19□□□□□ -1.1
SMC5YOL034W RSC2Q06488 889 aa8.19□□□□□ -1.1
SMC5YOL034W PSR1Q07800 427 aa8.19□□□□□ -1.1
SMC5YOL034W ALD3P54114 506 aa8.18□□□□□ -1.1
SMC5YOL034W RPN7Q06103 429 aaKnown RBP8.18□□□□□ -1.1
SMC5YOL034W IES2P40154 320 aa8.18□□□□□ -1.1
SMC5YOL034W MEP1P40260 492 aa8.18□□□□□ -1.1
SMC5YOL034W HGH1P48362 394 aaKnown RBP8.18□□□□□ -1.1
SMC5YOL034W TAN1P53072 289 aaPredicted RBP8.18□□□□□ -1.1
SMC5YOL034W CEX1Q12453 761 aa8.18□□□□□ -1.1
SMC5YOL034W KEX1P09620 729 aa8.18□□□□□ -1.1
SMC5YOL034W SPB4P25808 606 aaPredicted RBP8.18□□□□□ -1.1
SMC5YOL034W RNH70P53331 553 aa8.18□□□□□ -1.1
SMC5YOL034W YNL058CP53947 316 aa8.17□□□□□ -1.1
SMC5YOL034W GGA1Q06336 557 aa8.17□□□□□ -1.1
SMC5YOL034W CDC45Q08032 650 aa8.17□□□□□ -1.1
SMC5YOL034W NOP58Q12499 511 aaKnown RBP8.17□□□□□ -1.1
SMC5YOL034W SAC3P46674 1301 aa8.17□□□□□ -1.1
SMC5YOL034W HXT5P38695 592 aa8.16□□□□□ -1.1
SMC5YOL034W MGA2P40578 1113 aa8.16□□□□□ -1.1
SMC5YOL034W BNI4P53858 892 aa8.16□□□□□ -1.1
SMC5YOL034W KAR1P11927 433 aa8.16□□□□□ -1.1
SMC5YOL034W MSH4P40965 878 aaPredicted RBP8.16□□□□□ -1.1
SMC5YOL034W PPX1P38698 397 aa8.15□□□□□ -1.1
SMC5YOL034W VHR2P40041 505 aa8.15□□□□□ -1.1
SMC5YOL034W CLN1P20437 546 aa8.14□□□□□ -1.11
SMC5YOL034W SWI3P32591 825 aa8.14□□□□□ -1.11
SMC5YOL034W BYE1P36106 594 aa8.14□□□□□ -1.11
SMC5YOL034W MET1P36150 593 aa8.14□□□□□ -1.11
SMC5YOL034W SEC3P33332 1336 aaKnown RBP8.14□□□□□ -1.11
SMC5YOL034W GPI8P49018 411 aa8.14□□□□□ -1.11
SMC5YOL034W CYB2P00175 591 aa8.14□□□□□ -1.11
SMC5YOL034W SRP1Q02821 542 aaKnown RBP8.14□□□□□ -1.11
SMC5YOL034W PHM6Q05637 104 aa8.14□□□□□ -1.11
SMC5YOL034W MPH3P0CE00 602 aa8.13□□□□□ -1.11
SMC5YOL034W CBF5P33322 483 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
SMC5YOL034W LTV1P34078 463 aa8.13□□□□□ -1.11
SMC5YOL034W PRP3Q03338 469 aaPredicted RBP8.13□□□□□ -1.11
SMC5YOL034W NOP56Q12460 504 aaKnown RBP RIP-Chip data8.13□□□□□ -1.11not detected
SMC5YOL034W CMP2P14747 604 aa8.13□□□□□ -1.11
SMC5YOL034W DEP1P31385 405 aa8.13□□□□□ -1.11
SMC5YOL034W SIC1P38634 284 aa8.13□□□□□ -1.11
SMC5YOL034W RIA1P53893 1110 aa8.13□□□□□ -1.11
SMC5YOL034W APC5Q08683 685 aa8.13□□□□□ -1.11
SMC5YOL034W NKP1Q12493 238 aa8.12□□□□□ -1.11
SMC5YOL034W SSB1P11484 613 aaKnown RBP8.12□□□□□ -1.11
SMC5YOL034W VMA1P17255 1071 aaKnown RBP8.12□□□□□ -1.11
SMC5YOL034W MSH3P25336 1018 aa8.12□□□□□ -1.11
SMC5YOL034W BRF1P29056 596 aa8.12□□□□□ -1.11
SMC5YOL034W SSB2P40150 613 aaKnown RBP8.12□□□□□ -1.11
SMC5YOL034W NSE3Q05541 303 aa8.12□□□□□ -1.11
SMC5YOL034W UBP1P25037 809 aa8.11□□□□□ -1.11
SMC5YOL034W TPS3P38426 1054 aaKnown RBP8.11□□□□□ -1.11
SMC5YOL034W OYE2Q03558 400 aaKnown RBP8.11□□□□□ -1.11
SMC5YOL034W NPL4P33755 580 aa8.11□□□□□ -1.11
SMC5YOL034W ELA1P53861 379 aaPredicted RBP8.11□□□□□ -1.11
SMC5YOL034W RPL17AP05740 184 aaKnown RBP8.11□□□□□ -1.11
SMC5YOL034W SIT4P20604 311 aa8.11□□□□□ -1.11
SMC5YOL034W RPN12P32496 274 aa8.11□□□□□ -1.11
SMC5YOL034W HEM3P28789 327 aa8.1□□□□□ -1.11
SMC5YOL034W RPC82P32349 654 aa8.1□□□□□ -1.11
SMC5YOL034W KEL2P50090 882 aa8.1□□□□□ -1.11
SMC5YOL034W RRP15Q06511 250 aaPredicted RBP8.1□□□□□ -1.11
SMC5YOL034W NFI1Q12216 726 aa8.1□□□□□ -1.11
SMC5YOL034W CDC31P06704 161 aaKnown RBP8.09□□□□□ -1.11
SMC5YOL034W SEC6P32844 805 aa8.09□□□□□ -1.11
SMC5YOL034W YMR124WP39523 943 aaKnown RBP8.09□□□□□ -1.11
SMC5YOL034W SVL3Q03088 825 aaKnown RBP8.09□□□□□ -1.11
SMC5YOL034W RTG2P32608 588 aaKnown RBP8.09□□□□□ -1.11
SMC5YOL034W YHR218WP38899 603 aa8.09□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.4 ms