RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B RPN11P43588 306 aaKnown RBP4.64□□□□□ -1.67
YLR227W-BYLR227W-B HUL5P53119 910 aa4.64□□□□□ -1.67
YLR227W-BYLR227W-B CWC15Q03772 175 aaKnown RBP4.64□□□□□ -1.67
YLR227W-BYLR227W-B MSB4Q12317 492 aa4.64□□□□□ -1.67
YLR227W-BYLR227W-B NAB3P38996 802 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
YLR227W-BYLR227W-B ROM2P51862 1356 aaKnown RBP4.63□□□□□ -1.67
YLR227W-BYLR227W-B ATG1P53104 897 aa4.62□□□□□ -1.67
YLR227W-BYLR227W-B SNT2P53127 1403 aa4.62□□□□□ -1.67
YLR227W-BYLR227W-B RRT6P53117 311 aaPredicted RBP4.62□□□□□ -1.67
YLR227W-BYLR227W-B LDH1P38139 375 aa4.61□□□□□ -1.67
YLR227W-BYLR227W-B ESP1Q03018 1630 aa4.61□□□□□ -1.67
YLR227W-BYLR227W-B IRC20Q06554 1556 aa4.61□□□□□ -1.67
YLR227W-BYLR227W-B TIM50Q02776 476 aa4.61□□□□□ -1.67
YLR227W-BYLR227W-B AFG2P32794 780 aa4.6□□□□□ -1.67
YLR227W-BYLR227W-B NCS6P53088 359 aa4.6□□□□□ -1.67
YLR227W-BYLR227W-B RPS9AO13516 197 aaKnown RBP4.6□□□□□ -1.67
YLR227W-BYLR227W-B HXT5P38695 592 aa4.6□□□□□ -1.67
YLR227W-BYLR227W-B TY3B-GQ99315 1547 aa4.6□□□□□ -1.67
YLR227W-BYLR227W-B SRB8P25648 1427 aa4.59□□□□□ -1.67
YLR227W-BYLR227W-B YKL133CP36066 463 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B UBX2Q04228 584 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B STU1P38198 1513 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B SIS2P36024 562 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B PUS6P53294 404 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B SGD1Q06132 899 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B IOC3P43596 787 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B YOL036WQ08206 761 aa4.58□□□□□ -1.68
YLR227W-BYLR227W-B SPT2P06843 333 aaPredicted RBP4.57□□□□□ -1.68
YLR227W-BYLR227W-B DSF2P38213 736 aa4.57□□□□□ -1.68
YLR227W-BYLR227W-B THS1P04801 734 aaKnown RBP4.57□□□□□ -1.68
YLR227W-BYLR227W-B UTP22P53254 1237 aaPredicted RBP4.57□□□□□ -1.68
YLR227W-BYLR227W-B STB3Q12427 513 aa4.57□□□□□ -1.68
YLR227W-BYLR227W-B RTG2P32608 588 aaKnown RBP4.57□□□□□ -1.68
YLR227W-BYLR227W-B GRX1P25373 110 aaKnown RBP4.56□□□□□ -1.68
YLR227W-BYLR227W-B IRE1P32361 1115 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B RAD9P14737 1309 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B SPT21P35209 758 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B FMP30Q02883 468 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B YKR018CP36114 725 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B PUS5Q06244 254 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B YPR084WQ06821 456 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B IPL1P38991 367 aa4.56□□□□□ -1.68
YLR227W-BYLR227W-B TAF8Q03750 510 aa4.55□□□□□ -1.68
YLR227W-BYLR227W-B TUM1Q08686 304 aaKnown RBP4.55□□□□□ -1.68
YLR227W-BYLR227W-B AAD16Q02895 342 aa4.55□□□□□ -1.68
YLR227W-BYLR227W-B RPP2BP02400 110 aaKnown RBP4.54□□□□□ -1.68
YLR227W-BYLR227W-B MCD4P36051 919 aa4.54□□□□□ -1.68
YLR227W-BYLR227W-B ULS1Q08562 1619 aa4.54□□□□□ -1.68
YLR227W-BYLR227W-B SVF1Q05515 481 aa4.54□□□□□ -1.68
YLR227W-BYLR227W-B SAS4Q04003 481 aa4.54□□□□□ -1.68
YLR227W-BYLR227W-B ENP2P48234 707 aaKnown RBP4.54□□□□□ -1.68
YLR227W-BYLR227W-B SSA4P22202 642 aaKnown RBP4.53□□□□□ -1.68
YLR227W-BYLR227W-B YNR029CP53729 429 aaKnown RBP4.53□□□□□ -1.68
YLR227W-BYLR227W-B NOP53Q12080 455 aaKnown RBP4.53□□□□□ -1.68
YLR227W-BYLR227W-B IML1P47170 1584 aa4.53□□□□□ -1.68
YLR227W-BYLR227W-B CSE4P36012 229 aa4.53□□□□□ -1.68
YLR227W-BYLR227W-B NTE1Q04958 1679 aa4.53□□□□□ -1.68
YLR227W-BYLR227W-B TSC11P40061 1430 aa4.53□□□□□ -1.68
YLR227W-BYLR227W-B SMY2P32909 740 aaKnown RBP4.53□□□□□ -1.68
YLR227W-BYLR227W-B OYE3P41816 400 aaPredicted RBP4.52□□□□□ -1.69
YLR227W-BYLR227W-B VPS53P47061 822 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B MAM3Q12296 706 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B GPT2P36148 743 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B YDL129WQ07555 291 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B MAP1Q01662 387 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
YLR227W-BYLR227W-B BRE1Q07457 700 aaKnown RBP4.52□□□□□ -1.69
YLR227W-BYLR227W-B NYV1Q12255 253 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B RET1P22276 1149 aaKnown RBP4.52□□□□□ -1.69
YLR227W-BYLR227W-B DNF2Q12675 1612 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B YNR014WP53719 212 aa4.52□□□□□ -1.69
YLR227W-BYLR227W-B YKU70P32807 602 aa4.51□□□□□ -1.69
YLR227W-BYLR227W-B KGD2P19262 463 aaPredicted RBP4.51□□□□□ -1.69
YLR227W-BYLR227W-B IDI1P15496 288 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B ATG2P53855 1592 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B CST9Q06032 482 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B TY3A-GQ12173 290 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B TY3A-IQ99219 290 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B SPR3P41901 512 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B YMR084WA2P2R3 262 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B RGD1P38339 666 aa4.5□□□□□ -1.69
YLR227W-BYLR227W-B PSF2P40359 213 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B CWH41P53008 833 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B YBP2P53169 641 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B SDH5Q08230 162 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B FMO1P38866 432 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B PKH1Q03407 766 aa4.49□□□□□ -1.69
YLR227W-BYLR227W-B ALD4P46367 519 aaKnown RBP4.48□□□□□ -1.69
YLR227W-BYLR227W-B LYS14P40971 790 aa4.48□□□□□ -1.69
YLR227W-BYLR227W-B NST1P53935 1240 aa4.48□□□□□ -1.69
YLR227W-BYLR227W-B PSF3Q12146 194 aa4.48□□□□□ -1.69
YLR227W-BYLR227W-B PTP3P40048 928 aa4.48□□□□□ -1.69
YLR227W-BYLR227W-B RPN1P38764 993 aaKnown RBP4.48□□□□□ -1.69
YLR227W-BYLR227W-B FAA4P47912 694 aaKnown RBP4.48□□□□□ -1.69
YLR227W-BYLR227W-B SIR4P11978 1358 aa4.48□□□□□ -1.69
YLR227W-BYLR227W-B VAB2P40003 282 aa4.47□□□□□ -1.69
YLR227W-BYLR227W-B FET4P40988 552 aa4.47□□□□□ -1.69
YLR227W-BYLR227W-B BCK1Q01389 1478 aa4.47□□□□□ -1.69
YLR227W-BYLR227W-B RAT1Q02792 1006 aaKnown RBP4.47□□□□□ -1.69
YLR227W-BYLR227W-B FRD1P32614 470 aaKnown RBP4.46□□□□□ -1.69
YLR227W-BYLR227W-B MET7Q08645 548 aa4.46□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms