RNA–Protein interactions for RNA: YLR227W-B

YLR227W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR227W-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR227W-BYLR227W-B MTC1P47018 478 aaKnown RBP7.16□□□□□ -1.26
YLR227W-BYLR227W-B RSE1Q04693 1361 aaKnown RBP6.72□□□□□ -1.33
YLR227W-BYLR227W-B INO80P53115 1489 aa6.52□□□□□ -1.37
YLR227W-BYLR227W-B MIF2P35201 549 aa6.45□□□□□ -1.38
YLR227W-BYLR227W-B ABP1P15891 592 aaKnown RBP6.12□□□□□ -1.43
YLR227W-BYLR227W-B RQC2Q12532 1038 aaKnown RBP5.99□□□□□ -1.45
YLR227W-BYLR227W-B YFR006WP43590 535 aa5.95□□□□□ -1.46
YLR227W-BYLR227W-B KOG1P38873 1557 aa5.87□□□□□ -1.47
YLR227W-BYLR227W-B YTA7P40340 1379 aa5.78□□□□□ -1.48
YLR227W-BYLR227W-B SPA2P23201 1466 aaKnown RBP5.78□□□□□ -1.48
YLR227W-BYLR227W-B SWR1Q05471 1514 aa5.68□□□□□ -1.5
YLR227W-BYLR227W-B NSR1P27476 414 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
YLR227W-BYLR227W-B DNA2P38859 1522 aa5.66□□□□□ -1.5
YLR227W-BYLR227W-B PRI1P10363 409 aa5.65□□□□□ -1.51
YLR227W-BYLR227W-B MON2P48563 1636 aaPredicted RBP5.64□□□□□ -1.51
YLR227W-BYLR227W-B URN1Q06525 465 aaKnown RBP5.59□□□□□ -1.51
YLR227W-BYLR227W-B UBP1P25037 809 aa5.55□□□□□ -1.52
YLR227W-BYLR227W-B LEU3P08638 886 aa5.53□□□□□ -1.52
YLR227W-BYLR227W-B TAF2P23255 1407 aa5.51□□□□□ -1.53
YLR227W-BYLR227W-B TCB3Q03640 1545 aaKnown RBP5.49□□□□□ -1.53
YLR227W-BYLR227W-B RTT106P40161 455 aa5.49□□□□□ -1.53
YLR227W-BYLR227W-B SGS1P35187 1447 aa5.47□□□□□ -1.53
YLR227W-BYLR227W-B DRS2P39524 1355 aa5.47□□□□□ -1.53
YLR227W-BYLR227W-B YJL181WP46987 611 aa5.44□□□□□ -1.54
YLR227W-BYLR227W-B MMS1Q06211 1407 aa5.43□□□□□ -1.54
YLR227W-BYLR227W-B RRD1P40454 393 aaKnown RBP5.41□□□□□ -1.54
YLR227W-BYLR227W-B LTE1P07866 1435 aa5.4□□□□□ -1.54
YLR227W-BYLR227W-B GEA2P39993 1459 aaKnown RBP5.4□□□□□ -1.55
YLR227W-BYLR227W-B NAP1P25293 417 aaKnown RBP5.39□□□□□ -1.55
YLR227W-BYLR227W-B SAS10Q12136 610 aaPredicted RBP5.34□□□□□ -1.55
YLR227W-BYLR227W-B SCT1P32784 759 aa5.34□□□□□ -1.55
YLR227W-BYLR227W-B BNR1P40450 1375 aa5.34□□□□□ -1.55
YLR227W-BYLR227W-B BUD4P47136 1447 aa5.33□□□□□ -1.56
YLR227W-BYLR227W-B ECM5Q03214 1411 aa5.31□□□□□ -1.56
YLR227W-BYLR227W-B YMR196WQ04336 1088 aa5.3□□□□□ -1.56
YLR227W-BYLR227W-B SKI3P17883 1432 aaKnown RBP5.29□□□□□ -1.56
YLR227W-BYLR227W-B RRT14P40470 206 aa5.28□□□□□ -1.56
YLR227W-BYLR227W-B UGA2P38067 497 aa5.27□□□□□ -1.57
YLR227W-BYLR227W-B ENP1P38333 483 aaKnown RBP5.26□□□□□ -1.57
YLR227W-BYLR227W-B ENV9Q08651 330 aa5.23□□□□□ -1.57
YLR227W-BYLR227W-B MRX12P47084 519 aa5.21□□□□□ -1.58
YLR227W-BYLR227W-B TAF7Q05021 590 aa5.21□□□□□ -1.58
YLR227W-BYLR227W-B PRP40P33203 583 aaKnown RBP5.21□□□□□ -1.58
YLR227W-BYLR227W-B BFR2Q06631 534 aaKnown RBP5.2□□□□□ -1.58
YLR227W-BYLR227W-B TRM732Q03496 1420 aa5.19□□□□□ -1.58
YLR227W-BYLR227W-B BPT1P14772 1559 aa5.19□□□□□ -1.58
YLR227W-BYLR227W-B HSL1P34244 1518 aa5.18□□□□□ -1.58
YLR227W-BYLR227W-B YKR023WP36119 530 aaKnown RBP5.16□□□□□ -1.58
YLR227W-BYLR227W-B REV3P14284 1504 aa5.16□□□□□ -1.58
YLR227W-BYLR227W-B SPT6P23615 1451 aaKnown RBP5.14□□□□□ -1.59
YLR227W-BYLR227W-B DRS1P32892 752 aaKnown RBP5.14□□□□□ -1.59
YLR227W-BYLR227W-B ALD2P47771 506 aa5.13□□□□□ -1.59
YLR227W-BYLR227W-B ITT1Q04638 464 aa5.13□□□□□ -1.59
YLR227W-BYLR227W-B SAP155P43612 1002 aa5.13□□□□□ -1.59
YLR227W-BYLR227W-B MET5P47169 1442 aa5.12□□□□□ -1.59
YLR227W-BYLR227W-B DNF1P32660 1571 aa5.11□□□□□ -1.59
YLR227W-BYLR227W-B THO2P53552 1597 aaKnown RBP5.11□□□□□ -1.59
YLR227W-BYLR227W-B LAM6Q08001 693 aa5.1□□□□□ -1.59
YLR227W-BYLR227W-B MDS3P53094 1487 aa5.07□□□□□ -1.6
YLR227W-BYLR227W-B SPT7P35177 1332 aa5.07□□□□□ -1.6
YLR227W-BYLR227W-B MET10P39692 1035 aa5.06□□□□□ -1.6
YLR227W-BYLR227W-B ESC1Q03661 1658 aaKnown RBP5.06□□□□□ -1.6
YLR227W-BYLR227W-B PAF1P38351 445 aa5.05□□□□□ -1.6
YLR227W-BYLR227W-B ALD3P54114 506 aa5.05□□□□□ -1.6
YLR227W-BYLR227W-B SSA1P10591 642 aaKnown RBP5.05□□□□□ -1.6
YLR227W-BYLR227W-B EDE1P34216 1381 aa5.04□□□□□ -1.6
YLR227W-BYLR227W-B PEX21P50091 288 aa5.04□□□□□ -1.6
YLR227W-BYLR227W-B MAK10Q02197 733 aa5.03□□□□□ -1.61
YLR227W-BYLR227W-B STH1P32597 1359 aa5.02□□□□□ -1.61
YLR227W-BYLR227W-B YCF1P39109 1515 aaKnown RBP5.01□□□□□ -1.61
YLR227W-BYLR227W-B YIL055CP40523 627 aaKnown RBP5.01□□□□□ -1.61
YLR227W-BYLR227W-B YAP3P38749 330 aa5□□□□□ -1.61
YLR227W-BYLR227W-B ZDS2P54786 942 aa5□□□□□ -1.61
YLR227W-BYLR227W-B YMR074CQ04773 145 aa5□□□□□ -1.61
YLR227W-BYLR227W-B RPS9BP05755 195 aaKnown RBP4.99□□□□□ -1.61
YLR227W-BYLR227W-B SSK2P53599 1579 aa4.99□□□□□ -1.61
YLR227W-BYLR227W-B TAF5P38129 798 aa4.99□□□□□ -1.61
YLR227W-BYLR227W-B GTT3P39996 337 aa4.99□□□□□ -1.61
YLR227W-BYLR227W-B YAH1Q12184 172 aaKnown RBP4.99□□□□□ -1.61
YLR227W-BYLR227W-B AVT3P36062 692 aa4.98□□□□□ -1.61
YLR227W-BYLR227W-B GLN1P32288 370 aaKnown RBP4.97□□□□□ -1.61
YLR227W-BYLR227W-B PSD2P53037 1138 aaKnown RBP4.97□□□□□ -1.61
YLR227W-BYLR227W-B SEN54Q02825 467 aaPredicted RBP4.97□□□□□ -1.61
YLR227W-BYLR227W-B IMH1Q06704 911 aaKnown RBP4.97□□□□□ -1.61
YLR227W-BYLR227W-B AIM7Q12156 149 aa4.97□□□□□ -1.61
YLR227W-BYLR227W-B LEO1P38439 464 aa4.97□□□□□ -1.61
YLR227W-BYLR227W-B HPC2Q01448 625 aa4.96□□□□□ -1.61
YLR227W-BYLR227W-B RSC30P38781 883 aa4.95□□□□□ -1.62
YLR227W-BYLR227W-B TRM3Q07527 1436 aa4.95□□□□□ -1.62
YLR227W-BYLR227W-B TIF4632P39936 914 aaKnown RBP4.93□□□□□ -1.62
YLR227W-BYLR227W-B YEF3P16521 1044 aaKnown RBP4.91□□□□□ -1.62
YLR227W-BYLR227W-B EAR1Q03212 550 aa4.91□□□□□ -1.62
YLR227W-BYLR227W-B IFH1P39520 1085 aa4.9□□□□□ -1.62
YLR227W-BYLR227W-B SMC4Q12267 1418 aa4.9□□□□□ -1.63
YLR227W-BYLR227W-B CHD1P32657 1468 aa4.9□□□□□ -1.63
YLR227W-BYLR227W-B CKB1P43639 278 aa4.9□□□□□ -1.63
YLR227W-BYLR227W-B TOP2P06786 1428 aaKnown RBP4.9□□□□□ -1.63
YLR227W-BYLR227W-B TFC8Q12308 588 aa4.89□□□□□ -1.63
YLR227W-BYLR227W-B SSA2P10592 639 aaKnown RBP4.89□□□□□ -1.63
YLR227W-BYLR227W-B YPK9Q12697 1472 aa4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms