RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W GAP1P19145 602 aaPredicted RBP5.06□□□□□ -1.6
BCD1YHR040W CHL1P22516 861 aaPredicted RBP5.06□□□□□ -1.6
BCD1YHR040W YDR344CQ05510 147 aa5.06□□□□□ -1.6
BCD1YHR040W YPR109WQ06104 294 aa5.06□□□□□ -1.6
BCD1YHR040W YRR1Q12172 810 aa5.06□□□□□ -1.6
BCD1YHR040W CLB5P30283 435 aa5.05□□□□□ -1.6
BCD1YHR040W SPT23P35210 1082 aa5.05□□□□□ -1.6
BCD1YHR040W TEA1P47988 759 aa5.05□□□□□ -1.6
BCD1YHR040W PTC2P39966 464 aaKnown RBP5.04□□□□□ -1.6
BCD1YHR040W AIM7Q12156 149 aa5.04□□□□□ -1.6
BCD1YHR040W YPK9Q12697 1472 aa5.04□□□□□ -1.6
BCD1YHR040W POL1P13382 1468 aa5.03□□□□□ -1.6
BCD1YHR040W BNI4P53858 892 aa5.03□□□□□ -1.6
BCD1YHR040W RLF2Q12495 606 aa5.03□□□□□ -1.6
BCD1YHR040W ESP1Q03018 1630 aa5.03□□□□□ -1.6
BCD1YHR040W KIN1P13185 1064 aa5.01□□□□□ -1.61
BCD1YHR040W NPL4P33755 580 aa5.01□□□□□ -1.61
BCD1YHR040W PDR1P12383 1068 aa5□□□□□ -1.61
BCD1YHR040W MMS22Q06164 1454 aa5□□□□□ -1.61
BCD1YHR040W ATG2P53855 1592 aa4.99□□□□□ -1.61
BCD1YHR040W NUD1P32336 851 aa4.99□□□□□ -1.61
BCD1YHR040W BCK2P33306 851 aa4.99□□□□□ -1.61
BCD1YHR040W YMR196WQ04336 1088 aa4.99□□□□□ -1.61
BCD1YHR040W MDS3P53094 1487 aa4.99□□□□□ -1.61
BCD1YHR040W STU1P38198 1513 aa4.97□□□□□ -1.61
BCD1YHR040W YML082WQ04533 649 aaKnown RBP4.97□□□□□ -1.61
BCD1YHR040W MYO4P32492 1471 aa4.96□□□□□ -1.62
BCD1YHR040W NIS1P53939 407 aa4.96□□□□□ -1.62
BCD1YHR040W PEP1P32319 1579 aa4.95□□□□□ -1.62
BCD1YHR040W RPO31P04051 1460 aa4.95□□□□□ -1.62
BCD1YHR040W YOR1P53049 1477 aa4.95□□□□□ -1.62
BCD1YHR040W SCC2Q04002 1493 aa4.95□□□□□ -1.62
BCD1YHR040W GCD11P32481 527 aaKnown RBP4.95□□□□□ -1.62
BCD1YHR040W VRP1P37370 817 aa4.95□□□□□ -1.62
BCD1YHR040W RGA1P39083 1007 aa4.95□□□□□ -1.62
BCD1YHR040W TOP2P06786 1428 aaKnown RBP4.95□□□□□ -1.62
BCD1YHR040W SMC4Q12267 1418 aa4.95□□□□□ -1.62
BCD1YHR040W CSN12P47130 423 aa4.94□□□□□ -1.62
BCD1YHR040W FPK1P53739 893 aa4.94□□□□□ -1.62
BCD1YHR040W KEX2P13134 814 aa4.93□□□□□ -1.62
BCD1YHR040W RAM1P22007 431 aa4.93□□□□□ -1.62
BCD1YHR040W STR2P47164 639 aa4.93□□□□□ -1.62
BCD1YHR040W ISM1P48526 1002 aa4.93□□□□□ -1.62
BCD1YHR040W GYP1Q08484 637 aa4.93□□□□□ -1.62
BCD1YHR040W RKR1Q04781 1562 aa4.92□□□□□ -1.62
BCD1YHR040W SIT4P20604 311 aa4.92□□□□□ -1.62
BCD1YHR040W GLN1P32288 370 aaKnown RBP4.92□□□□□ -1.62
BCD1YHR040W MMP1Q12372 583 aa4.92□□□□□ -1.62
BCD1YHR040W YPR015CQ12531 247 aa4.92□□□□□ -1.62
BCD1YHR040W PRT1P06103 763 aaKnown RBP4.91□□□□□ -1.62
BCD1YHR040W SSA2P10592 639 aaKnown RBP4.91□□□□□ -1.62
BCD1YHR040W SLY41P22215 453 aa4.91□□□□□ -1.62
BCD1YHR040W GUA1P38625 525 aaKnown RBP4.91□□□□□ -1.62
BCD1YHR040W HST2P53686 357 aa4.91□□□□□ -1.62
BCD1YHR040W YNL115CP53925 644 aa4.91□□□□□ -1.62
BCD1YHR040W BUD20Q08004 166 aaPredicted RBP4.91□□□□□ -1.62
BCD1YHR040W UFD4P33202 1483 aa4.91□□□□□ -1.62
BCD1YHR040W RTF1P53064 558 aa4.9□□□□□ -1.63
BCD1YHR040W TYW1Q08960 810 aaKnown RBP4.9□□□□□ -1.63
BCD1YHR040W SCJ1P25303 377 aa4.89□□□□□ -1.63
BCD1YHR040W PAT1P25644 796 aaKnown RBP4.89□□□□□ -1.63
BCD1YHR040W HGH1P48362 394 aaKnown RBP4.89□□□□□ -1.63
BCD1YHR040W ERF2Q06551 359 aa4.89□□□□□ -1.63
BCD1YHR040W YCF1P39109 1515 aaKnown RBP4.88□□□□□ -1.63
BCD1YHR040W SAS4Q04003 481 aa4.88□□□□□ -1.63
BCD1YHR040W STH1P32597 1359 aa4.88□□□□□ -1.63
BCD1YHR040W ESS1P22696 170 aa4.87□□□□□ -1.63
BCD1YHR040W SPT16P32558 1035 aaKnown RBP4.87□□□□□ -1.63
BCD1YHR040W PKH3Q03306 898 aaPredicted RBP4.87□□□□□ -1.63
BCD1YHR040W TY1A-DR4O74302 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-HP0C2I4 478 aaKnown RBP4.86□□□□□ -1.63
BCD1YHR040W TY1A-AP0CX57 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-PR1P0CX58 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-ORP0CX59 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-PR2P0CX60 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-DR5P0CX65 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-ER2P0CX66 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-GR3P0CX67 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-LR1P0CX68 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-MR2P0CX69 440 aa4.86□□□□□ -1.63
BCD1YHR040W SEC2P17065 759 aa4.86□□□□□ -1.63
BCD1YHR040W BRL1P38770 471 aa4.86□□□□□ -1.63
BCD1YHR040W XDJ1P39102 459 aa4.86□□□□□ -1.63
BCD1YHR040W RRN7P40992 514 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-JR2P47099 440 aa4.86□□□□□ -1.63
BCD1YHR040W TBF1Q02457 562 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-DR1Q03856 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-ML1Q04706 440 aaKnown RBP4.86□□□□□ -1.63
BCD1YHR040W TY1A-BRQ12217 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-NL2Q12470 440 aa4.86□□□□□ -1.63
BCD1YHR040W TY1A-GR2Q12485 440 aa4.86□□□□□ -1.63
BCD1YHR040W KTR1P27810 393 aaKnown RBP4.85□□□□□ -1.63
BCD1YHR040W MRF1P30775 413 aaPredicted RBP4.85□□□□□ -1.63
BCD1YHR040W HPC2Q01448 625 aa4.85□□□□□ -1.63
BCD1YHR040W IKI3Q06706 1349 aaKnown RBP4.85□□□□□ -1.63
BCD1YHR040W BPT1P14772 1559 aa4.85□□□□□ -1.63
BCD1YHR040W ARG8P18544 423 aa4.84□□□□□ -1.63
BCD1YHR040W YJU3P28321 313 aa4.84□□□□□ -1.63
BCD1YHR040W PUS6P53294 404 aa4.84□□□□□ -1.63
BCD1YHR040W TUB4P53378 473 aa4.84□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms