Protein–RNA interactions for Protein: P0C2I4

TY1A-H, Transposon Ty1-H Gag polyprotein, yeastyeast

Known RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-HP0C2I4 NSR1YGR159C 1245 nt15.3■□□□□ 0.04
TY1A-HP0C2I4 YML009W-BYML009W-B 477 nt15.09■□□□□ 0.01
TY1A-HP0C2I4 YGR139WYGR139W 339 nt14.67□□□□□ -0.06
TY1A-HP0C2I4 NOP1YDL014W 984 nt14.56□□□□□ -0.08
TY1A-HP0C2I4 MOT3YMR070W 1473 nt14.55□□□□□ -0.08
TY1A-HP0C2I4 Q0182Q0182 405 nt14.43□□□□□ -0.1
TY1A-HP0C2I4 MDJ1YFL016C 1536 nt14.33□□□□□ -0.12
TY1A-HP0C2I4 NME1NME1 340 nt13.75□□□□□ -0.21
TY1A-HP0C2I4 YKL036CYKL036C 393 nt13.65□□□□□ -0.22
TY1A-HP0C2I4 CSM2YIL132C 642 nt13.26□□□□□ -0.29
TY1A-HP0C2I4 SSA3YBL075C 1950 nt13.24□□□□□ -0.29
TY1A-HP0C2I4 YJL027CYJL027C 417 nt13.13□□□□□ -0.31
TY1A-HP0C2I4 PAU21YOR394W 495 nt13.05□□□□□ -0.32
TY1A-HP0C2I4 PAU22YPL282C 495 nt13.05□□□□□ -0.32
TY1A-HP0C2I4 ARO7YPR060C 771 nt12.9□□□□□ -0.34
TY1A-HP0C2I4 Q0297Q0297 156 nt12.75□□□□□ -0.37
TY1A-HP0C2I4 SRX1YKL086W 384 nt12.73□□□□□ -0.37
TY1A-HP0C2I4 PAM17YKR065C 594 nt12.68□□□□□ -0.38
TY1A-HP0C2I4 SCS3YGL126W 1143 nt12.55□□□□□ -0.4
TY1A-HP0C2I4 REG2YBR050C 1017 nt12.55□□□□□ -0.4
TY1A-HP0C2I4 YBR190WYBR190W 312 nt12.46□□□□□ -0.41
TY1A-HP0C2I4 DBP2YNL112W 1641 nt12.4□□□□□ -0.42
TY1A-HP0C2I4 YDR509WYDR509W 348 nt12.38□□□□□ -0.43
TY1A-HP0C2I4 BUR6YER159C 429 nt12.31□□□□□ -0.44
TY1A-HP0C2I4 VAR1Q0140 1197 nt12.31□□□□□ -0.44
TY1A-HP0C2I4 BMT5YIL096C 1011 nt12.23□□□□□ -0.45
TY1A-HP0C2I4 Q0010Q0010 387 nt12.22□□□□□ -0.45
TY1A-HP0C2I4 YCR051WYCR051W 669 nt12.07□□□□□ -0.48
TY1A-HP0C2I4 RTC3YHR087W 336 nt12.06□□□□□ -0.48
TY1A-HP0C2I4 YIR018C-AYIR018C-A 138 nt12.05□□□□□ -0.48
TY1A-HP0C2I4 SRN2YLR119W 642 nt12.03□□□□□ -0.48
TY1A-HP0C2I4 ARA2YMR041C 1008 nt12.02□□□□□ -0.49
TY1A-HP0C2I4 Q0144Q0144 330 nt12□□□□□ -0.49
TY1A-HP0C2I4 PUT4YOR348C 1884 nt11.97□□□□□ -0.49
TY1A-HP0C2I4 SEM1YDR363W-A 270 nt11.96□□□□□ -0.49
TY1A-HP0C2I4 YEL009C-AYEL009C-A 408 nt11.87□□□□□ -0.51
TY1A-HP0C2I4 SCJ1YMR214W 1134 nt11.84□□□□□ -0.51
TY1A-HP0C2I4 YLR122CYLR122C 378 nt11.8□□□□□ -0.52
TY1A-HP0C2I4 YOL085CYOL085C 342 nt11.75□□□□□ -0.53
TY1A-HP0C2I4 MET8YBR213W 825 nt11.73□□□□□ -0.53
TY1A-HP0C2I4 CLB6YGR109C 1143 nt11.71□□□□□ -0.53
TY1A-HP0C2I4 ABZ2YMR289W 1125 nt11.69□□□□□ -0.54
TY1A-HP0C2I4 ARP10YDR106W 855 nt11.67□□□□□ -0.54
TY1A-HP0C2I4 TRN1tP(UGG)A 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 SUF9tP(UGG)F 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 SUF8tP(UGG)H 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 tP(UGG)LtP(UGG)L 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 SUF7tP(UGG)M 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 tP(UGG)N1tP(UGG)N1 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 tP(UGG)N2tP(UGG)N2 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 tP(UGG)O1tP(UGG)O1 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 SUF11tP(UGG)O2 72 nt11.65□□□□□ -0.54
TY1A-HP0C2I4 SPT5YML010W 3192 nt11.61□□□□□ -0.55
TY1A-HP0C2I4 TOM20YGR082W 552 nt11.58□□□□□ -0.56
TY1A-HP0C2I4 YCR099CYCR099C 468 nt11.57□□□□□ -0.56
TY1A-HP0C2I4 CCC1YLR220W 969 nt11.54□□□□□ -0.56
TY1A-HP0C2I4 SSA4YER103W 1929 nt11.54□□□□□ -0.56
TY1A-HP0C2I4 ARE1YCR048W 1833 nt11.49□□□□□ -0.57
TY1A-HP0C2I4 AI3Q0060 1248 nt11.49□□□□□ -0.57
TY1A-HP0C2I4 UTP6YDR449C 1323 nt11.46□□□□□ -0.57
TY1A-HP0C2I4 POA1YBR022W 534 nt11.46□□□□□ -0.57
TY1A-HP0C2I4 PET20YPL159C 762 nt11.43□□□□□ -0.58
TY1A-HP0C2I4 RVS167YDR388W 1449 nt11.43□□□□□ -0.58
TY1A-HP0C2I4 RPP1BYDL130W 321 nt11.42□□□□□ -0.58
TY1A-HP0C2I4 URH1YDR400W 1023 nt11.42□□□□□ -0.58
TY1A-HP0C2I4 LCP5YER127W 1074 nt11.41□□□□□ -0.58
TY1A-HP0C2I4 BSC6YOL137W 1494 nt11.4□□□□□ -0.58
TY1A-HP0C2I4 PKP1YIL042C 1185 nt11.4□□□□□ -0.58
TY1A-HP0C2I4 ATS1YAL020C 1002 nt11.37□□□□□ -0.59
TY1A-HP0C2I4 AI5_BETAQ0075 1065 nt11.35□□□□□ -0.59
TY1A-HP0C2I4 SKG1YKR100C 1068 nt11.34□□□□□ -0.59
TY1A-HP0C2I4 HMT1YBR034C 1047 nt11.34□□□□□ -0.59
TY1A-HP0C2I4 Q0142Q0142 177 nt11.32□□□□□ -0.6
TY1A-HP0C2I4 YHR049C-AYHR049C-A 297 nt11.32□□□□□ -0.6
TY1A-HP0C2I4 snR78snR78 87 nt11.28□□□□□ -0.6
TY1A-HP0C2I4 BDF1YLR399C 2061 nt11.23□□□□□ -0.61
TY1A-HP0C2I4 YPL071CYPL071C 471 nt11.22□□□□□ -0.61
TY1A-HP0C2I4 SAH1YER043C 1350 nt11.18□□□□□ -0.62
TY1A-HP0C2I4 YNR068CYNR068C 819 nt11.16□□□□□ -0.62
TY1A-HP0C2I4 Q0255Q0255 1419 nt11.12□□□□□ -0.63
TY1A-HP0C2I4 YHM2YMR241W 945 nt11.1□□□□□ -0.63
TY1A-HP0C2I4 YPL168WYPL168W 1293 nt11.1□□□□□ -0.63
TY1A-HP0C2I4 YJL118WYJL118W 660 nt11.09□□□□□ -0.63
TY1A-HP0C2I4 YNL067W-AYNL067W-A 147 nt11.08□□□□□ -0.64
TY1A-HP0C2I4 OPI9YLR338W 858 nt11.07□□□□□ -0.64
TY1A-HP0C2I4 TAT1YBR069C 1860 nt11.06□□□□□ -0.64
TY1A-HP0C2I4 URN1YPR152C 1398 nt11.05□□□□□ -0.64
TY1A-HP0C2I4 Q0017Q0017 162 nt11.05□□□□□ -0.64
TY1A-HP0C2I4 PAC11YDR488C 1602 nt11.03□□□□□ -0.64
TY1A-HP0C2I4 YMR057CYMR057C 372 nt11.03□□□□□ -0.64
TY1A-HP0C2I4 YOR169CYOR169C 465 nt10.99□□□□□ -0.65
TY1A-HP0C2I4 YGL188CYGL188C 174 nt10.97□□□□□ -0.65
TY1A-HP0C2I4 URE2YNL229C 1065 nt10.97□□□□□ -0.65
TY1A-HP0C2I4 AIR1YIL079C 1083 nt10.96□□□□□ -0.65
TY1A-HP0C2I4 tP(UGG)O3tP(UGG)O3 72 nt10.95□□□□□ -0.66
TY1A-HP0C2I4 BUD23YCR047C 828 nt10.94□□□□□ -0.66
TY1A-HP0C2I4 ATP6Q0085 780 nt10.93□□□□□ -0.66
TY1A-HP0C2I4 YJL107CYJL107C 1164 nt10.91□□□□□ -0.66
TY1A-HP0C2I4 PET122YER153C 765 nt10.9□□□□□ -0.66
TY1A-HP0C2I4 SCR1SCR1 522 nt10.9□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 11.8 ms