RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C TFB3Q03290 321 aa2.21□□□□□ -2.05
SEC3YER008C PSE1P32337 1089 aaKnown RBP2.21□□□□□ -2.06
SEC3YER008C NUP42P49686 430 aaKnown RBP2.21□□□□□ -2.06
SEC3YER008C YPR204WQ08995 1032 aa2.21□□□□□ -2.06
SEC3YER008C TFB4Q12004 338 aa2.21□□□□□ -2.06
SEC3YER008C NUD1P32336 851 aa2.21□□□□□ -2.06
SEC3YER008C SEC61P32915 480 aa2.21□□□□□ -2.06
SEC3YER008C KEX2P13134 814 aa2.2□□□□□ -2.06
SEC3YER008C AIM7Q12156 149 aa2.2□□□□□ -2.06
SEC3YER008C XDJ1P39102 459 aa2.2□□□□□ -2.06
SEC3YER008C KTR7P40504 517 aa2.2□□□□□ -2.06
SEC3YER008C YDR090CQ03193 310 aa2.2□□□□□ -2.06
SEC3YER008C HAP5Q02516 242 aa2.2□□□□□ -2.06
SEC3YER008C SPT16P32558 1035 aaKnown RBP2.2□□□□□ -2.06
SEC3YER008C PRE3P38624 215 aa2.2□□□□□ -2.06
SEC3YER008C PDR1P12383 1068 aa2.19□□□□□ -2.06
SEC3YER008C FPK1P53739 893 aa2.19□□□□□ -2.06
SEC3YER008C RGR1P19263 1082 aa2.19□□□□□ -2.06
SEC3YER008C MVP1P40959 511 aaKnown RBP2.19□□□□□ -2.06
SEC3YER008C YJU3P28321 313 aa2.18□□□□□ -2.06
SEC3YER008C ORC6P38826 435 aa2.18□□□□□ -2.06
SEC3YER008C ENV9Q08651 330 aa2.18□□□□□ -2.06
SEC3YER008C PKC1P24583 1151 aa2.18□□□□□ -2.06
SEC3YER008C YNL108CP53929 270 aa2.18□□□□□ -2.06
SEC3YER008C GAR1P28007 205 aaKnown RBP2.17□□□□□ -2.06
SEC3YER008C KIP2P28743 706 aa2.17□□□□□ -2.06
SEC3YER008C SPT23P35210 1082 aa2.17□□□□□ -2.06
SEC3YER008C RRN7P40992 514 aa2.17□□□□□ -2.06
SEC3YER008C KXD1P53158 218 aa2.17□□□□□ -2.06
SEC3YER008C NIS1P53939 407 aa2.17□□□□□ -2.06
SEC3YER008C ERG12P07277 443 aa2.17□□□□□ -2.06
SEC3YER008C FRK1Q03002 865 aaPredicted RBP2.17□□□□□ -2.06
SEC3YER008C RAD59Q12223 238 aa2.17□□□□□ -2.06
SEC3YER008C RLF2Q12495 606 aa2.17□□□□□ -2.06
SEC3YER008C TCB3Q03640 1545 aaKnown RBP2.17□□□□□ -2.06
SEC3YER008C BIM1P40013 344 aa2.16□□□□□ -2.06
SEC3YER008C ISM1P48526 1002 aa2.16□□□□□ -2.06
SEC3YER008C YNL115CP53925 644 aa2.16□□□□□ -2.06
SEC3YER008C DNA2P38859 1522 aa2.16□□□□□ -2.06
SEC3YER008C YDL206WQ12424 762 aa2.15□□□□□ -2.06
SEC3YER008C KOG1P38873 1557 aa2.15□□□□□ -2.07
SEC3YER008C TRM1P15565 570 aaKnown RBP2.15□□□□□ -2.07
SEC3YER008C RTG2P32608 588 aaKnown RBP2.15□□□□□ -2.07
SEC3YER008C RPL34AP87262 121 aaPredicted RBP2.15□□□□□ -2.07
SEC3YER008C PUS6P53294 404 aa2.14□□□□□ -2.07
SEC3YER008C ERF2Q06551 359 aa2.14□□□□□ -2.07
SEC3YER008C LAM6Q08001 693 aa2.14□□□□□ -2.07
SEC3YER008C ALR1Q08269 859 aa2.14□□□□□ -2.07
SEC3YER008C PEP1P32319 1579 aa2.14□□□□□ -2.07
SEC3YER008C PRT1P06103 763 aaKnown RBP2.14□□□□□ -2.07
SEC3YER008C RAM1P22007 431 aa2.14□□□□□ -2.07
SEC3YER008C INO80P53115 1489 aa2.14□□□□□ -2.07
SEC3YER008C ARH1P48360 493 aa2.14□□□□□ -2.07
SEC3YER008C HPC2Q01448 625 aa2.14□□□□□ -2.07
SEC3YER008C ATG32P40458 529 aa2.13□□□□□ -2.07
SEC3YER008C HST2P53686 357 aa2.13□□□□□ -2.07
SEC3YER008C YEL077CQ3E7X8 1277 aa2.13□□□□□ -2.07
SEC3YER008C CPS1P27614 576 aa2.13□□□□□ -2.07
SEC3YER008C ISF1P32488 338 aa2.12□□□□□ -2.07
SEC3YER008C IXR1P33417 597 aa2.12□□□□□ -2.07
SEC3YER008C DAT1P13483 248 aaKnown RBP2.12□□□□□ -2.07
SEC3YER008C SSA4P22202 642 aaKnown RBP2.12□□□□□ -2.07
SEC3YER008C MRF1P30775 413 aaPredicted RBP2.12□□□□□ -2.07
SEC3YER008C BNI4P53858 892 aa2.12□□□□□ -2.07
SEC3YER008C IOC4Q04213 475 aa2.12□□□□□ -2.07
SEC3YER008C YDR344CQ05510 147 aa2.12□□□□□ -2.07
SEC3YER008C KTR1P27810 393 aaKnown RBP2.11□□□□□ -2.07
SEC3YER008C PUS5Q06244 254 aa2.11□□□□□ -2.07
SEC3YER008C HSL1P34244 1518 aa2.11□□□□□ -2.07
SEC3YER008C TUB4P53378 473 aa2.11□□□□□ -2.07
SEC3YER008C SRF1Q12516 437 aa2.11□□□□□ -2.07
SEC3YER008C SSK2P53599 1579 aa2.11□□□□□ -2.07
SEC3YER008C STR2P47164 639 aa2.11□□□□□ -2.07
SEC3YER008C THO2P53552 1597 aaKnown RBP2.11□□□□□ -2.07
SEC3YER008C TEC1P18412 486 aa2.1□□□□□ -2.07
SEC3YER008C GUT2P32191 649 aa2.1□□□□□ -2.07
SEC3YER008C TIF1P10081 395 aaKnown RBP2.1□□□□□ -2.07
SEC3YER008C YDJ1P25491 409 aaKnown RBP2.1□□□□□ -2.07
SEC3YER008C ATG3P40344 310 aa2.1□□□□□ -2.07
SEC3YER008C ATG2P53855 1592 aa2.1□□□□□ -2.07
SEC3YER008C YPP1P46951 817 aa2.1□□□□□ -2.07
SEC3YER008C NST1P53935 1240 aa2.1□□□□□ -2.07
SEC3YER008C ITT1Q04638 464 aa2.1□□□□□ -2.07
SEC3YER008C BIO2P32451 375 aa2.09□□□□□ -2.07
SEC3YER008C TBS1P38114 1094 aa2.09□□□□□ -2.07
SEC3YER008C RTF1P53064 558 aa2.09□□□□□ -2.07
SEC3YER008C BUD20Q08004 166 aaPredicted RBP2.09□□□□□ -2.07
SEC3YER008C PAC1P39946 494 aaKnown RBP2.09□□□□□ -2.07
SEC3YER008C STE20Q03497 939 aaKnown RBP2.09□□□□□ -2.07
SEC3YER008C EMP47P43555 445 aa2.09□□□□□ -2.08
SEC3YER008C APP1P53933 587 aa2.09□□□□□ -2.08
SEC3YER008C HST3P53687 447 aa2.08□□□□□ -2.08
SEC3YER008C ECM23Q02710 187 aa2.08□□□□□ -2.08
SEC3YER008C SRC1Q03707 834 aa2.08□□□□□ -2.08
SEC3YER008C TY1B-BRQ12193 1756 aa2.08□□□□□ -2.08
SEC3YER008C TY1B-GR3Q12316 1755 aa2.08□□□□□ -2.08
SEC3YER008C TY1B-ORQ92393 1755 aa2.08□□□□□ -2.08
SEC3YER008C CSE4P36012 229 aa2.08□□□□□ -2.08
SEC3YER008C UBX7P38349 436 aa2.08□□□□□ -2.08
SEC3YER008C SOH1P38633 127 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms