RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C RAD59Q12223 238 aa4.09□□□□□ -1.75
VPS3YDR495C SEC8P32855 1065 aa4.09□□□□□ -1.75
VPS3YDR495C YHL050CP38721 697 aa4.08□□□□□ -1.76
VPS3YDR495C YHR219WP38900 624 aa4.08□□□□□ -1.76
VPS3YDR495C KTR7P40504 517 aa4.08□□□□□ -1.76
VPS3YDR495C OSW7P43611 510 aa4.08□□□□□ -1.76
VPS3YDR495C ECM23Q02710 187 aa4.08□□□□□ -1.76
VPS3YDR495C GIN4Q12263 1142 aa4.08□□□□□ -1.76
VPS3YDR495C YEL077CQ3E7X8 1277 aa4.08□□□□□ -1.76
VPS3YDR495C YLR326WQ06170 240 aaKnown RBP4.08□□□□□ -1.76
VPS3YDR495C ESS1P22696 170 aa4.08□□□□□ -1.76
VPS3YDR495C RRP14P36080 434 aaKnown RBP4.08□□□□□ -1.76
VPS3YDR495C MAG2Q06436 670 aaKnown RBP4.08□□□□□ -1.76
VPS3YDR495C PDR1P12383 1068 aa4.07□□□□□ -1.76
VPS3YDR495C SCJ1P25303 377 aa4.07□□□□□ -1.76
VPS3YDR495C SRP40P32583 406 aaPredicted RBP4.07□□□□□ -1.76
VPS3YDR495C GRS1P38088 690 aaKnown RBP4.07□□□□□ -1.76
VPS3YDR495C YMR1P47147 688 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
VPS3YDR495C SVF1Q05515 481 aa4.07□□□□□ -1.76
VPS3YDR495C MRX10Q05648 414 aa4.07□□□□□ -1.76
VPS3YDR495C DBP1P24784 617 aaKnown RBP4.07□□□□□ -1.76
VPS3YDR495C CSE4P36012 229 aa4.07□□□□□ -1.76
VPS3YDR495C MDG1P53885 366 aa4.07□□□□□ -1.76
VPS3YDR495C VAC8P39968 578 aa4.06□□□□□ -1.76
VPS3YDR495C KAR5Q04746 504 aa4.06□□□□□ -1.76
VPS3YDR495C SIS2P36024 562 aa4.06□□□□□ -1.76
VPS3YDR495C WHI5Q12416 295 aa4.06□□□□□ -1.76
VPS3YDR495C YJU3P28321 313 aa4.05□□□□□ -1.76
VPS3YDR495C YKL091CP33324 310 aaKnown RBP4.05□□□□□ -1.76
VPS3YDR495C YMR196WQ04336 1088 aa4.05□□□□□ -1.76
VPS3YDR495C ARG8P18544 423 aa4.05□□□□□ -1.76
VPS3YDR495C RAD54P32863 898 aa4.05□□□□□ -1.76
VPS3YDR495C UBX7P38349 436 aa4.05□□□□□ -1.76
VPS3YDR495C MMP1Q12372 583 aa4.05□□□□□ -1.76
VPS3YDR495C CIT2P08679 460 aa4.04□□□□□ -1.76
VPS3YDR495C TFG1P41895 735 aaPredicted RBP4.04□□□□□ -1.76
VPS3YDR495C MDJ2P42834 146 aa4.04□□□□□ -1.76
VPS3YDR495C RIM21P48565 533 aa4.04□□□□□ -1.76
VPS3YDR495C FPK1P53739 893 aa4.04□□□□□ -1.76
VPS3YDR495C NIS1P53939 407 aa4.04□□□□□ -1.76
VPS3YDR495C MET1P36150 593 aa4.04□□□□□ -1.76
VPS3YDR495C PCS60P38137 543 aaKnown RBP RIP-Chip data4.04□□□□□ -1.76not detected
VPS3YDR495C TPS3P38426 1054 aaKnown RBP4.04□□□□□ -1.76
VPS3YDR495C ALG12P53730 551 aa4.04□□□□□ -1.76
VPS3YDR495C STB3Q12427 513 aa4.04□□□□□ -1.76
VPS3YDR495C TRL1P09880 827 aaKnown RBP4.03□□□□□ -1.76
VPS3YDR495C FPR3P38911 411 aaKnown RBP4.03□□□□□ -1.76
VPS3YDR495C ALD3P54114 506 aa4.03□□□□□ -1.76
VPS3YDR495C MAK16P10962 306 aaPredicted RBP4.03□□□□□ -1.77
VPS3YDR495C PMC1P38929 1173 aaPredicted RBP4.03□□□□□ -1.77
VPS3YDR495C IOC3P43596 787 aa4.03□□□□□ -1.77
VPS3YDR495C ZDS1P50111 915 aaKnown RBP4.03□□□□□ -1.77
VPS3YDR495C SCY1P53009 804 aa4.03□□□□□ -1.77
VPS3YDR495C HST2P53686 357 aa4.03□□□□□ -1.77
VPS3YDR495C ALD6P54115 500 aaKnown RBP4.03□□□□□ -1.77
VPS3YDR495C ORC6P38826 435 aa4.02□□□□□ -1.77
VPS3YDR495C SSB1P11484 613 aaKnown RBP4.01□□□□□ -1.77
VPS3YDR495C RGR1P19263 1082 aa4.01□□□□□ -1.77
VPS3YDR495C MGE1P38523 228 aa4.01□□□□□ -1.77
VPS3YDR495C SSB2P40150 613 aaKnown RBP4.01□□□□□ -1.77
VPS3YDR495C YOL057WQ08225 711 aa4.01□□□□□ -1.77
VPS3YDR495C PEP12P32854 288 aa4.01□□□□□ -1.77
VPS3YDR495C PPX1P38698 397 aa4.01□□□□□ -1.77
VPS3YDR495C NAB3P38996 802 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
VPS3YDR495C TPM2P40414 161 aa4□□□□□ -1.77
VPS3YDR495C ATH1P48016 1211 aa4□□□□□ -1.77
VPS3YDR495C UBP3Q01477 912 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
VPS3YDR495C MNL2Q12205 849 aa4□□□□□ -1.77
VPS3YDR495C GAL2P13181 574 aa3.99□□□□□ -1.77
VPS3YDR495C RDS2P19541 446 aaKnown RBP3.99□□□□□ -1.77
VPS3YDR495C SPT5P27692 1063 aaKnown RBP3.99□□□□□ -1.77
VPS3YDR495C CWC15Q03772 175 aaKnown RBP3.99□□□□□ -1.77
VPS3YDR495C POB3Q04636 552 aaKnown RBP3.99□□□□□ -1.77
VPS3YDR495C FYV10P40492 516 aa3.99□□□□□ -1.77
VPS3YDR495C MAD1P40957 749 aa3.99□□□□□ -1.77
VPS3YDR495C YJR107WP47145 328 aa3.98□□□□□ -1.77
VPS3YDR495C YGR273CP53329 174 aa3.98□□□□□ -1.77
VPS3YDR495C CLB5P30283 435 aa3.98□□□□□ -1.77
VPS3YDR495C MVP1P40959 511 aaKnown RBP3.98□□□□□ -1.77
VPS3YDR495C NUT2Q06213 157 aa3.98□□□□□ -1.77
VPS3YDR495C YOR238WQ08634 303 aa3.98□□□□□ -1.77
VPS3YDR495C AIM21P40563 679 aa3.97□□□□□ -1.77
VPS3YDR495C PIB1Q06651 286 aa3.97□□□□□ -1.77
VPS3YDR495C CDC53Q12018 815 aaKnown RBP3.97□□□□□ -1.77
VPS3YDR495C RPA135P22138 1203 aaKnown RBP3.97□□□□□ -1.77
VPS3YDR495C MCM2P29469 868 aa3.97□□□□□ -1.77
VPS3YDR495C GRX4P32642 244 aa3.97□□□□□ -1.77
VPS3YDR495C BOL3P39724 118 aa3.97□□□□□ -1.77
VPS3YDR495C ECM16Q04217 1267 aaKnown RBP3.97□□□□□ -1.77
VPS3YDR495C NSE3Q05541 303 aa3.97□□□□□ -1.77
VPS3YDR495C FRT1Q99332 602 aa3.97□□□□□ -1.77
VPS3YDR495C GRE2Q12068 342 aaKnown RBP3.97□□□□□ -1.77
VPS3YDR495C WRS1Q12109 432 aaKnown RBP3.97□□□□□ -1.77
VPS3YDR495C MET4P32389 672 aa3.96□□□□□ -1.78
VPS3YDR495C ISF1P32488 338 aa3.96□□□□□ -1.78
VPS3YDR495C PBP2P38151 413 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VPS3YDR495C GLO3P38682 493 aaKnown RBP3.96□□□□□ -1.78
VPS3YDR495C PNP1Q05788 311 aa3.96□□□□□ -1.78
VPS3YDR495C ENV9Q08651 330 aa3.96□□□□□ -1.78
VPS3YDR495C YGR161W-CQ3E744 92 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms