RNA–Protein interactions for RNA: YDR495C

VPS3, Transcript of Component of CORVET membrane tethering complex, yeastyeast

Gene VPS3, Length 3,036 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS3YDR495C DRS1P32892 752 aaKnown RBP6.86□□□□□ -1.31
VPS3YDR495C TFA1P36100 482 aa6.3□□□□□ -1.4
VPS3YDR495C BFR2Q06631 534 aaKnown RBP6.24□□□□□ -1.41
VPS3YDR495C MTC1P47018 478 aaKnown RBP6.07□□□□□ -1.44
VPS3YDR495C RQC2Q12532 1038 aaKnown RBP6.05□□□□□ -1.44
VPS3YDR495C TAF7Q05021 590 aa5.82□□□□□ -1.48
VPS3YDR495C AVT3P36062 692 aa5.66□□□□□ -1.5
VPS3YDR495C DIP2Q12220 943 aaPredicted RBP5.58□□□□□ -1.52
VPS3YDR495C DMA1P38823 416 aa5.53□□□□□ -1.52
VPS3YDR495C LEO1P38439 464 aa5.34□□□□□ -1.56
VPS3YDR495C PTP3P40048 928 aa5.15□□□□□ -1.58
VPS3YDR495C RSE1Q04693 1361 aaKnown RBP5.05□□□□□ -1.6
VPS3YDR495C LEU3P08638 886 aa5.01□□□□□ -1.61
VPS3YDR495C DMA2P53924 522 aa4.99□□□□□ -1.61
VPS3YDR495C SAS10Q12136 610 aaPredicted RBP4.91□□□□□ -1.62
VPS3YDR495C SSP1P38871 571 aa4.89□□□□□ -1.63
VPS3YDR495C ABP1P15891 592 aaKnown RBP4.88□□□□□ -1.63
VPS3YDR495C RPL17AP05740 184 aaKnown RBP4.86□□□□□ -1.63
VPS3YDR495C RPL17BP46990 184 aaKnown RBP4.86□□□□□ -1.63
VPS3YDR495C RPN1P38764 993 aaKnown RBP4.83□□□□□ -1.64
VPS3YDR495C RLF2Q12495 606 aa4.83□□□□□ -1.64
VPS3YDR495C IFH1P39520 1085 aa4.78□□□□□ -1.64
VPS3YDR495C ISW2Q08773 1120 aa4.77□□□□□ -1.65
VPS3YDR495C YAH1Q12184 172 aaKnown RBP4.77□□□□□ -1.65
VPS3YDR495C RIM101P33400 625 aa4.76□□□□□ -1.65
VPS3YDR495C AIM44Q99299 758 aa4.74□□□□□ -1.65
VPS3YDR495C RPG1P38249 964 aaKnown RBP4.73□□□□□ -1.65
VPS3YDR495C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.73□□□□□ -1.65not detected
VPS3YDR495C REB1P21538 810 aa4.72□□□□□ -1.65
VPS3YDR495C IOC4Q04213 475 aa4.71□□□□□ -1.66
VPS3YDR495C SPB4P25808 606 aaPredicted RBP4.7□□□□□ -1.66
VPS3YDR495C NAP1P25293 417 aaKnown RBP4.7□□□□□ -1.66
VPS3YDR495C CKB1P43639 278 aa4.69□□□□□ -1.66
VPS3YDR495C OXP1P28273 1286 aa4.68□□□□□ -1.66
VPS3YDR495C SPT21P35209 758 aa4.68□□□□□ -1.66
VPS3YDR495C FAP1P53971 965 aa4.68□□□□□ -1.66
VPS3YDR495C YLR271WQ06152 274 aa4.67□□□□□ -1.66
VPS3YDR495C MGA2P40578 1113 aa4.63□□□□□ -1.67
VPS3YDR495C YML020WQ03722 664 aa4.62□□□□□ -1.67
VPS3YDR495C YIL055CP40523 627 aaKnown RBP4.62□□□□□ -1.67
VPS3YDR495C ORC1P54784 914 aaPredicted RBP4.62□□□□□ -1.67
VPS3YDR495C VPS70P47161 811 aa4.6□□□□□ -1.67
VPS3YDR495C CST9Q06032 482 aa4.59□□□□□ -1.67
VPS3YDR495C KIN1P13185 1064 aa4.58□□□□□ -1.68
VPS3YDR495C SET1P38827 1080 aaKnown RBP4.54□□□□□ -1.68
VPS3YDR495C SLX8P40072 274 aa4.54□□□□□ -1.68
VPS3YDR495C HGH1P48362 394 aaKnown RBP4.54□□□□□ -1.68
VPS3YDR495C NOP8Q08287 484 aaPredicted RBP4.53□□□□□ -1.68
VPS3YDR495C RSM7P47150 247 aa4.52□□□□□ -1.69
VPS3YDR495C GLC3P32775 704 aa4.51□□□□□ -1.69
VPS3YDR495C YPR148CQ06523 435 aa4.49□□□□□ -1.69
VPS3YDR495C RAM2P29703 316 aa4.49□□□□□ -1.69
VPS3YDR495C DSF2P38213 736 aa4.49□□□□□ -1.69
VPS3YDR495C YNR021WP53723 404 aaKnown RBP4.49□□□□□ -1.69
VPS3YDR495C GUA1P38625 525 aaKnown RBP4.48□□□□□ -1.69
VPS3YDR495C SSA1P10591 642 aaKnown RBP4.48□□□□□ -1.69
VPS3YDR495C PBS2P08018 668 aa4.48□□□□□ -1.69
VPS3YDR495C GEF1P37020 779 aa4.48□□□□□ -1.69
VPS3YDR495C NOP7P53261 605 aaKnown RBP4.47□□□□□ -1.69
VPS3YDR495C PRI1P10363 409 aa4.46□□□□□ -1.69
VPS3YDR495C PRY3P47033 881 aa4.46□□□□□ -1.69
VPS3YDR495C URN1Q06525 465 aaKnown RBP4.46□□□□□ -1.7
VPS3YDR495C SUB2Q07478 446 aaKnown RBP4.45□□□□□ -1.7
VPS3YDR495C PSD2P53037 1138 aaKnown RBP4.44□□□□□ -1.7
VPS3YDR495C MAM3Q12296 706 aa4.43□□□□□ -1.7
VPS3YDR495C AIM7Q12156 149 aa4.43□□□□□ -1.7
VPS3YDR495C DIT2P21595 489 aa4.42□□□□□ -1.7
VPS3YDR495C TFB3Q03290 321 aa4.41□□□□□ -1.7
VPS3YDR495C IES2P40154 320 aa4.41□□□□□ -1.7
VPS3YDR495C MRX12P47084 519 aa4.4□□□□□ -1.71
VPS3YDR495C AI2P03876 854 aa4.4□□□□□ -1.71
VPS3YDR495C YKR023WP36119 530 aaKnown RBP4.4□□□□□ -1.71
VPS3YDR495C MET10P39692 1035 aa4.4□□□□□ -1.71
VPS3YDR495C SNU71P53207 620 aaKnown RBP4.39□□□□□ -1.71
VPS3YDR495C RCR1P38212 213 aa4.38□□□□□ -1.71
VPS3YDR495C PKC1P24583 1151 aa4.38□□□□□ -1.71
VPS3YDR495C ATF2P53296 535 aa4.38□□□□□ -1.71
VPS3YDR495C NUP42P49686 430 aaKnown RBP4.37□□□□□ -1.71
VPS3YDR495C HPC2Q01448 625 aa4.37□□□□□ -1.71
VPS3YDR495C SLD2P34252 453 aa4.37□□□□□ -1.71
VPS3YDR495C HOP09932 586 aa4.36□□□□□ -1.71
VPS3YDR495C BRL1P38770 471 aa4.36□□□□□ -1.71
VPS3YDR495C TSR3Q12094 313 aaKnown RBP4.35□□□□□ -1.71
VPS3YDR495C BIM1P40013 344 aa4.35□□□□□ -1.71
VPS3YDR495C YJL007CP47080 104 aa4.35□□□□□ -1.71
VPS3YDR495C TOP1P04786 769 aa4.34□□□□□ -1.71
VPS3YDR495C SSA4P22202 642 aaKnown RBP4.34□□□□□ -1.72
VPS3YDR495C RRN6P32786 894 aa4.34□□□□□ -1.72
VPS3YDR495C PAM1P37304 830 aaKnown RBP4.34□□□□□ -1.72
VPS3YDR495C MAK21Q12176 1025 aaKnown RBP4.34□□□□□ -1.72
VPS3YDR495C DCD1P06773 312 aa4.33□□□□□ -1.72
VPS3YDR495C ATG32P40458 529 aa4.33□□□□□ -1.72
VPS3YDR495C MRM1P25270 412 aa4.32□□□□□ -1.72
VPS3YDR495C BRN1P38170 754 aa4.32□□□□□ -1.72
VPS3YDR495C GLN1P32288 370 aaKnown RBP4.32□□□□□ -1.72
VPS3YDR495C REF2P42073 533 aaPredicted RBP4.32□□□□□ -1.72
VPS3YDR495C CPS1P27614 576 aa4.31□□□□□ -1.72
VPS3YDR495C RPL34AP87262 121 aaPredicted RBP4.31□□□□□ -1.72
VPS3YDR495C MAK11P20484 414 aaKnown RBP4.3□□□□□ -1.72
VPS3YDR495C AAD16Q02895 342 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms