RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	CDC21	P06785	304 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	SPT3	P06844	337 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	URA4	P20051	364 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	UGP1	P32861	499 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	YKL100C	P34248	587 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	RPC37	P36121	282 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	REI1	P38344	393 aa	Predicted RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	TAT2	P38967	592 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	YHB1	P39676	399 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	BOL3	P39724	118 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	SGF73	P53165	657 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	SED5	Q01590	340 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	MRS2	Q01926	470 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	VPS16	Q03308	798 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	VAM6	Q07468	1049 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
FOX2	YKR009C	NOP14	Q99207	810 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	PNO1	Q99216	274 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	PRP8	P33334	2413 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	COX1	P00401	534 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	ILV2	P07342	687 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	TYR1	P20049	452 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	ADE1	P27616	306 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	PRO1	P32264	428 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	PTM1	P32857	523 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	SEC61	P32915	480 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	RMA1	P36001	430 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	SSP120	P39931	234 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	MET12	P46151	657 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	ERG13	P54839	491 aa	Known RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	NHP10	Q03435	203 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	ROY1	Q04847	553 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	YET3	Q07451	203 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	TEN1	Q07921	160 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	YOR114W	Q12219	294 aa		4.12	□□□□□ -1.75
FOX2	YKR009C	BRR1	Q99177	341 aa	Predicted RBP	4.12	□□□□□ -1.75
FOX2	YKR009C	RPS4A	P0CX35	261 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	RPS4B	P0CX36	261 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	CRM1	P30822	1084 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	SSH4	P32343	579 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	CYM1	P32898	989 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	OLA1	P38219	394 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	YBR071W	P38243	211 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	FTH1	P38310	465 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	SPC97	P38863	823 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	UBX6	P47049	396 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	LCL3	P53153	274 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	GIP3	Q03016	1276 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	GYP1	Q08484	637 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	YPL066W	Q12194	479 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	GLO4	Q12320	285 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	CDC8	P00572	216 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	SEF1	P34228	1148 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	EFM1	P38732	585 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	YJR030C	P47101	745 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	TEL2	P53038	688 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	ERG26	P53199	349 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	TAF11	Q04226	346 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	RSF1	Q05043	376 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	ATG23	Q06671	453 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	CDA2	Q06703	312 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	RUD3	Q12234	484 aa	Known RBP	4.11	□□□□□ -1.75
FOX2	YKR009C	RGS2	Q99188	309 aa		4.11	□□□□□ -1.75
FOX2	YKR009C	GCD11	P32481	527 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	RTG1	P32607	177 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	KAP122	P32767	1081 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	INM1	P38710	295 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	HOS4	P40480	1083 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	ELP2	P42935	788 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	RCF2	P53721	224 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	MUS81	Q04149	632 aa	Predicted RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	BUD22	Q04347	519 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	UBX3	Q12229	455 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	MDY2	Q12285	212 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	RPB2	P08518	1224 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	RPS21A	P0C0V8	87 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	RPB4	P20433	221 aa	Predicted RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	RPO26	P20435	155 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	BAS1	P22035	811 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	SEC14	P24280	304 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	MCM5	P29496	775 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	HXT4	P32467	576 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	ORC2	P32833	620 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	SPP381	P38282	291 aa	Predicted RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	MNL1	P38888	796 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	HXT6	P39003	570 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	HXT7	P39004	570 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	YIL152W	P40455	235 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	IKS1	P47042	667 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	ELP4	Q02884	456 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	SPR28	Q04921	423 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	PNP1	Q05788	311 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	GIC2	Q06648	383 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	FRA1	Q07825	749 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	PUS9	Q12069	462 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	TMS1	Q12116	473 aa		4.1	□□□□□ -1.75
FOX2	YKR009C	FAS1	P07149	2051 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	SLH1	P53327	1967 aa	Known RBP	4.1	□□□□□ -1.75
FOX2	YKR009C	MRPL25	P23369	157 aa		4.09	□□□□□ -1.75
FOX2	YKR009C	ADH7	P25377	361 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 116.7 ms