RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTR3	YFR029W	HAM1	P47119	197 aa	Known RBP	4.08	□□□□□ -1.76
PTR3	YFR029W	STD1	Q02794	444 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	CRT10	Q08226	957 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	FRE3	Q08905	711 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	ERG27	Q12452	347 aa	Known RBP	4.08	□□□□□ -1.76
PTR3	YFR029W	LAG2	Q92325	660 aa		4.08	□□□□□ -1.76
PTR3	YFR029W	PDA1	P16387	420 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	YPK2	P18961	677 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	RNR1	P21524	888 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	PEX1	P24004	1043 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	APL1	P27351	700 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	YIM1	P28625	365 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	MCM4	P30665	933 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	HCS1	P34243	683 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	PPS1	P38148	807 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	SWC5	P38326	303 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	ACO2	P39533	789 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	ECM1	P39715	212 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	YJL107C	P42947	387 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	NMD5	P46970	1048 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	URB2	P47108	1174 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	DIA3	P52290	468 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	BUD9	P53226	547 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	REC102	Q02721	264 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	GTO3	Q04806	366 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	RRP12	Q12754	1228 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	ABF1	P14164	731 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	URA4	P20051	364 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	OSM1	P21375	501 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	ICL1	P28240	557 aa	Predicted RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	MVD1	P32377	396 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	MEI5	P32489	222 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	SRB5	P32585	307 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	GDT1	P38301	280 aa	Predicted RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PTR3	YFR029W	EMC2	P47133	292 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	MRPS35	P53292	345 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	COP1	P53622	1201 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	BOP3	P53958	396 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	BET4	Q00618	327 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	YPL108W	Q02872	168 aa	Predicted RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	INA17	Q02888	182 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	BRX1	Q08235	291 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	TIP41	Q12199	356 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	MDM20	Q12387	796 aa	Known RBP	4.07	□□□□□ -1.76
PTR3	YFR029W	FMP16	Q12497	93 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	DFG16	Q99234	619 aa		4.07	□□□□□ -1.76
PTR3	YFR029W	YLR415C	O13578	112 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	AI1	P03875	834 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	LEU4	P06208	619 aa	Known RBP	4.06	□□□□□ -1.76
PTR3	YFR029W	ILV2	P07342	687 aa	Known RBP	4.06	□□□□□ -1.76
PTR3	YFR029W	ELO2	P25358	347 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	SWP82	P43554	623 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	AIM22	P47051	409 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	ABM1	P47146	123 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	STR3	P53101	465 aa	Known RBP	4.06	□□□□□ -1.76
PTR3	YFR029W	IMO32	P53219	342 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	IPI3	P53877	555 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	SAM50	P53969	484 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	RRN11	Q04712	507 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	CTS2	Q06350	511 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	BSC6	Q08280	497 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	RKM1	Q08961	583 aa	Predicted RBP	4.06	□□□□□ -1.76
PTR3	YFR029W	AEP3	Q12089	606 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	ATG31	Q12421	196 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	YLL067C	Q07888	1374 aa		4.06	□□□□□ -1.76
PTR3	YFR029W	YBR085C-A	O43137	85 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MSF1	P08425	469 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	POL30	P15873	258 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	YSP3	P25036	478 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	DEP1	P31385	405 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MIA40	P36046	403 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ASC1	P38011	319 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	SKN7	P38889	622 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MTW1	P39731	289 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	BNA6	P43619	295 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	STB2	P46679	850 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MTG1	Q03151	367 aa	Predicted RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	USA1	Q03714	838 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	CAB5	Q03941	241 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	BUD22	Q04347	519 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	SGO1	Q08490	590 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	PUS9	Q12069	462 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	MED4	Q12343	284 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	POM34	Q12445	299 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ECM3	Q99252	613 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	COX3	P00420	269 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	KIN2	P13186	1147 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
PTR3	YFR029W	CWP1	P28319	239 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	PDB1	P32473	366 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	MSS1	P32559	526 aa	Predicted RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	SPR1	P32603	445 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	EMP70	P32802	667 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	UGP1	P32861	499 aa	Known RBP	4.05	□□□□□ -1.76
PTR3	YFR029W	NUP133	P36161	1157 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	IML3	P38265	245 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	ERG7	P38604	731 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	VHS2	P40463	436 aa		4.05	□□□□□ -1.76
PTR3	YFR029W	YIR042C	P40586	236 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms