RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W DRS1P32892 752 aaKnown RBP9.01□□□□□ -0.97
PTR3YFR029W MTC1P47018 478 aaKnown RBP8.65□□□□□ -1.02
PTR3YFR029W FAP1P53971 965 aa8.58□□□□□ -1.04
PTR3YFR029W TFA1P36100 482 aa8.25□□□□□ -1.09
PTR3YFR029W PRY3P47033 881 aa8.1□□□□□ -1.11
PTR3YFR029W BFR2Q06631 534 aaKnown RBP8.1□□□□□ -1.11
PTR3YFR029W AAD16Q02895 342 aa7.75□□□□□ -1.17
PTR3YFR029W YCK3P39962 524 aa7.73□□□□□ -1.17
PTR3YFR029W PRI1P10363 409 aa7.72□□□□□ -1.17
PTR3YFR029W AVT3P36062 692 aa7.65□□□□□ -1.18
PTR3YFR029W RQC2Q12532 1038 aaKnown RBP7.61□□□□□ -1.19
PTR3YFR029W TAF7Q05021 590 aa7.58□□□□□ -1.2
PTR3YFR029W HAA1Q12753 694 aaKnown RBP7.57□□□□□ -1.2
PTR3YFR029W DIP2Q12220 943 aaPredicted RBP7.44□□□□□ -1.22
PTR3YFR029W ISW2Q08773 1120 aa7.3□□□□□ -1.24
PTR3YFR029W RPG1P38249 964 aaKnown RBP7.27□□□□□ -1.25
PTR3YFR029W TSR3Q12094 313 aaKnown RBP7.25□□□□□ -1.25
PTR3YFR029W DMA1P38823 416 aa7.06□□□□□ -1.28
PTR3YFR029W MRPL32P25348 183 aa6.94□□□□□ -1.3
PTR3YFR029W LEO1P38439 464 aa6.89□□□□□ -1.31
PTR3YFR029W YGL015CP33199 130 aa6.87□□□□□ -1.31
PTR3YFR029W RSE1Q04693 1361 aaKnown RBP6.77□□□□□ -1.33
PTR3YFR029W BUD31P25337 157 aaPredicted RBP6.64□□□□□ -1.35
PTR3YFR029W PTP3P40048 928 aa6.62□□□□□ -1.35
PTR3YFR029W LEU3P08638 886 aa6.54□□□□□ -1.36
PTR3YFR029W SAS10Q12136 610 aaPredicted RBP6.53□□□□□ -1.36
PTR3YFR029W REB1P21538 810 aa6.52□□□□□ -1.37
PTR3YFR029W RPL17AP05740 184 aaKnown RBP6.51□□□□□ -1.37
PTR3YFR029W CDC27P38042 758 aa6.51□□□□□ -1.37
PTR3YFR029W RPL17BP46990 184 aaKnown RBP6.51□□□□□ -1.37
PTR3YFR029W ABP1P15891 592 aaKnown RBP6.5□□□□□ -1.37
PTR3YFR029W RIM101P33400 625 aa6.49□□□□□ -1.37
PTR3YFR029W SSP1P38871 571 aa6.47□□□□□ -1.37
PTR3YFR029W SPT21P35209 758 aa6.45□□□□□ -1.38
PTR3YFR029W DMA2P53924 522 aa6.43□□□□□ -1.38
PTR3YFR029W IFH1P39520 1085 aa6.39□□□□□ -1.39
PTR3YFR029W MAP2P38174 421 aaKnown RBP6.38□□□□□ -1.39
PTR3YFR029W UBP10P53874 792 aaPredicted RBP6.38□□□□□ -1.39
PTR3YFR029W IOC4Q04213 475 aa6.36□□□□□ -1.39
PTR3YFR029W OXP1P28273 1286 aa6.34□□□□□ -1.39
PTR3YFR029W YKR023WP36119 530 aaKnown RBP6.32□□□□□ -1.4
PTR3YFR029W NAP1P25293 417 aaKnown RBP6.3□□□□□ -1.4
PTR3YFR029W YLR271WQ06152 274 aa6.27□□□□□ -1.41
PTR3YFR029W ORC1P54784 914 aaPredicted RBP6.25□□□□□ -1.41
PTR3YFR029W RPN1P38764 993 aaKnown RBP6.23□□□□□ -1.41
PTR3YFR029W SIS1P25294 352 aaKnown RBP6.23□□□□□ -1.41
PTR3YFR029W RLF2Q12495 606 aa6.21□□□□□ -1.41
PTR3YFR029W YAH1Q12184 172 aaKnown RBP6.19□□□□□ -1.42
PTR3YFR029W ARP8Q12386 881 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
PTR3YFR029W URN1Q06525 465 aaKnown RBP6.18□□□□□ -1.42
PTR3YFR029W TFC8Q12308 588 aa6.17□□□□□ -1.42
PTR3YFR029W DCD1P06773 312 aa6.16□□□□□ -1.42
PTR3YFR029W HOP09932 586 aa6.16□□□□□ -1.42
PTR3YFR029W MGA2P40578 1113 aa6.16□□□□□ -1.42
PTR3YFR029W AIM44Q99299 758 aa6.13□□□□□ -1.43
PTR3YFR029W UBP9P39967 754 aa6.13□□□□□ -1.43
PTR3YFR029W TGL3P40308 642 aa6.13□□□□□ -1.43
PTR3YFR029W CST9Q06032 482 aa6.12□□□□□ -1.43
PTR3YFR029W TIF4632P39936 914 aaKnown RBP6.11□□□□□ -1.43
PTR3YFR029W CKB1P43639 278 aa6.1□□□□□ -1.43
PTR3YFR029W SCY1P53009 804 aa6.1□□□□□ -1.43
PTR3YFR029W YPR148CQ06523 435 aa6.06□□□□□ -1.44
PTR3YFR029W SLX5P32828 619 aaKnown RBP6.06□□□□□ -1.44
PTR3YFR029W YIL055CP40523 627 aaKnown RBP6.04□□□□□ -1.44
PTR3YFR029W RSM7P47150 247 aa6.04□□□□□ -1.44
PTR3YFR029W PSD2P53037 1138 aaKnown RBP6.04□□□□□ -1.44
PTR3YFR029W YML020WQ03722 664 aa6.01□□□□□ -1.45
PTR3YFR029W RAM2P29703 316 aa6.01□□□□□ -1.45
PTR3YFR029W NOP8Q08287 484 aaPredicted RBP5.99□□□□□ -1.45
PTR3YFR029W SPB4P25808 606 aaPredicted RBP5.98□□□□□ -1.45
PTR3YFR029W SET1P38827 1080 aaKnown RBP5.98□□□□□ -1.45
PTR3YFR029W DSF2P38213 736 aa5.96□□□□□ -1.45
PTR3YFR029W VPS70P47161 811 aa5.95□□□□□ -1.46
PTR3YFR029W BCH2P36122 765 aa5.94□□□□□ -1.46
PTR3YFR029W KIN1P13185 1064 aa5.92□□□□□ -1.46
PTR3YFR029W YNR021WP53723 404 aaKnown RBP5.9□□□□□ -1.47
PTR3YFR029W AI2P03876 854 aa5.89□□□□□ -1.47
PTR3YFR029W RCR1P38212 213 aa5.87□□□□□ -1.47
PTR3YFR029W SLX8P40072 274 aa5.86□□□□□ -1.47
PTR3YFR029W AIM7Q12156 149 aa5.86□□□□□ -1.47
PTR3YFR029W PBS2P08018 668 aa5.85□□□□□ -1.47
PTR3YFR029W GUA1P38625 525 aaKnown RBP5.84□□□□□ -1.48
PTR3YFR029W TOP1P04786 769 aa5.83□□□□□ -1.48
PTR3YFR029W SNU71P53207 620 aaKnown RBP5.83□□□□□ -1.48
PTR3YFR029W GLC3P32775 704 aa5.82□□□□□ -1.48
PTR3YFR029W NUP42P49686 430 aaKnown RBP5.82□□□□□ -1.48
PTR3YFR029W MST1P07236 462 aa5.81□□□□□ -1.48
PTR3YFR029W MAM3Q12296 706 aa5.8□□□□□ -1.48
PTR3YFR029W YBL029C-AQ3E756 94 aa5.8□□□□□ -1.48
PTR3YFR029W DIT2P21595 489 aa5.79□□□□□ -1.48
PTR3YFR029W ATG36P46983 293 aa5.79□□□□□ -1.48
PTR3YFR029W MAK11P20484 414 aaKnown RBP5.79□□□□□ -1.48
PTR3YFR029W MRX12P47084 519 aa5.79□□□□□ -1.48
PTR3YFR029W YRB30P53107 440 aaPredicted RBP5.78□□□□□ -1.48
PTR3YFR029W GEF1P37020 779 aa5.77□□□□□ -1.49
PTR3YFR029W SUB2Q07478 446 aaKnown RBP5.76□□□□□ -1.49
PTR3YFR029W SSA1P10591 642 aaKnown RBP5.75□□□□□ -1.49
PTR3YFR029W HPC2Q01448 625 aa5.75□□□□□ -1.49
PTR3YFR029W IES2P40154 320 aa5.75□□□□□ -1.49
PTR3YFR029W MRM1P25270 412 aa5.74□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms