RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeastyeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAC8YEL013W SGT2Q12118 346 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W FRE7Q12333 620 aa3.1□□□□□ -1.91
VAC8YEL013W ARP7Q12406 477 aa3.1□□□□□ -1.91
VAC8YEL013W YER175W-AQ8TGU4 54 aa3.1□□□□□ -1.91
VAC8YEL013W IPP1P00817 287 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W SST2P11972 698 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W SWI4P25302 1093 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W YJU2P28320 278 aaPredicted RBP3.1□□□□□ -1.91
VAC8YEL013W BMH2P34730 273 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W SHE3P38272 425 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W PCA1P38360 1216 aa3.1□□□□□ -1.91
VAC8YEL013W FHL1P39521 936 aa3.1□□□□□ -1.91
VAC8YEL013W ARB1P40024 610 aaKnown RBP3.1□□□□□ -1.91
VAC8YEL013W IMA5P40884 581 aa3.1□□□□□ -1.91
VAC8YEL013W SNM1P40993 198 aa3.1□□□□□ -1.91
VAC8YEL013W AIM23P47015 356 aa3.1□□□□□ -1.91
VAC8YEL013W UBX6P47049 396 aa3.1□□□□□ -1.91
VAC8YEL013W GLO1P50107 326 aa3.1□□□□□ -1.91
VAC8YEL013W TAN1P53072 289 aaPredicted RBP3.1□□□□□ -1.91
VAC8YEL013W PGA2P53903 129 aa3.1□□□□□ -1.91
VAC8YEL013W AAT1Q01802 451 aa3.1□□□□□ -1.91
VAC8YEL013W YPL071CQ02864 156 aa3.1□□□□□ -1.91
VAC8YEL013W ECM22Q05958 814 aaPredicted RBP3.1□□□□□ -1.91
VAC8YEL013W TPO3Q06451 622 aa3.1□□□□□ -1.91
VAC8YEL013W SHS1Q07657 551 aa3.1□□□□□ -1.91
VAC8YEL013W AAD4Q07747 329 aa3.1□□□□□ -1.91
VAC8YEL013W YDR061WQ12298 539 aa3.1□□□□□ -1.91
VAC8YEL013W YOL114CQ12322 202 aa3.1□□□□□ -1.91
VAC8YEL013W TPM1P17536 199 aaKnown RBP3.09□□□□□ -1.91
VAC8YEL013W AMD2P22580 549 aa3.09□□□□□ -1.91
VAC8YEL013W RPC53P25441 422 aa3.09□□□□□ -1.91
VAC8YEL013W YCR061WP25639 631 aa3.09□□□□□ -1.91
VAC8YEL013W SNO3P43544 222 aa3.09□□□□□ -1.91
VAC8YEL013W BST1P43571 1029 aa3.09□□□□□ -1.91
VAC8YEL013W COQ5P49017 307 aa3.09□□□□□ -1.91
VAC8YEL013W VEL1P53058 206 aa3.09□□□□□ -1.91
VAC8YEL013W TEP1P53916 434 aa3.09□□□□□ -1.91
VAC8YEL013W SWS2P53937 143 aa3.09□□□□□ -1.91
VAC8YEL013W TRM82Q03774 444 aa3.09□□□□□ -1.91
VAC8YEL013W PLM2Q04383 521 aa3.09□□□□□ -1.91
VAC8YEL013W PRM6Q04705 352 aa3.09□□□□□ -1.91
VAC8YEL013W CUR1Q06469 252 aa3.09□□□□□ -1.91
VAC8YEL013W CYK3Q07533 885 aa3.09□□□□□ -1.91
VAC8YEL013W YDL242WQ07746 117 aa3.09□□□□□ -1.91
VAC8YEL013W SAM4Q08985 325 aaKnown RBP3.09□□□□□ -1.91
VAC8YEL013W RKM5Q12367 367 aa3.09□□□□□ -1.91
VAC8YEL013W CEX1Q12453 761 aa3.09□□□□□ -1.91
VAC8YEL013W PNO1Q99216 274 aaKnown RBP3.09□□□□□ -1.91
VAC8YEL013W ASP3-2P0CX77 362 aa3.08□□□□□ -1.92
VAC8YEL013W ASP3-3P0CX78 362 aa3.08□□□□□ -1.92
VAC8YEL013W ASP3-4P0CX79 362 aa3.08□□□□□ -1.92
VAC8YEL013W ASP3-1P0CZ17 362 aa3.08□□□□□ -1.92
VAC8YEL013W THR4P16120 514 aaKnown RBP3.08□□□□□ -1.92
VAC8YEL013W YSC83P32792 385 aa3.08□□□□□ -1.92
VAC8YEL013W YKL050CP35736 922 aa3.08□□□□□ -1.92
VAC8YEL013W OPY1P38271 328 aa3.08□□□□□ -1.92
VAC8YEL013W ARO9P38840 513 aaPredicted RBP3.08□□□□□ -1.92
VAC8YEL013W AVT2P39981 480 aa3.08□□□□□ -1.92
VAC8YEL013W SHQ1P40486 507 aaPredicted RBP3.08□□□□□ -1.92
VAC8YEL013W HIS6P40545 261 aa3.08□□□□□ -1.92
VAC8YEL013W CIR1P42940 261 aa3.08□□□□□ -1.92
VAC8YEL013W SCD6P45978 349 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
VAC8YEL013W MAD3P47074 515 aa3.08□□□□□ -1.92
VAC8YEL013W BPL1P48445 690 aaPredicted RBP3.08□□□□□ -1.92
VAC8YEL013W AIM6Q07716 390 aa3.08□□□□□ -1.92
VAC8YEL013W PRS5Q12265 496 aaKnown RBP3.08□□□□□ -1.92
VAC8YEL013W SMC6Q12749 1114 aa3.08□□□□□ -1.92
VAC8YEL013W GAL1P04385 528 aa3.07□□□□□ -1.92
VAC8YEL013W ATP4P05626 244 aa3.07□□□□□ -1.92
VAC8YEL013W SIP1P32578 815 aa3.07□□□□□ -1.92
VAC8YEL013W AGP2P38090 596 aa3.07□□□□□ -1.92
VAC8YEL013W STT3P39007 718 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W SAP1P39955 897 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W RAD26P40352 1085 aa3.07□□□□□ -1.92
VAC8YEL013W PSA1P41940 361 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W IRC7P43623 340 aa3.07□□□□□ -1.92
VAC8YEL013W PYK2P52489 506 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W ERG13P54839 491 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W MET14Q02196 202 aa3.07□□□□□ -1.92
VAC8YEL013W RTN1Q04947 295 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W YOR387CQ08910 206 aa3.07□□□□□ -1.92
VAC8YEL013W ICT1Q12385 394 aa3.07□□□□□ -1.92
VAC8YEL013W PGA3Q12746 312 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W CHS1P08004 1131 aa3.07□□□□□ -1.92
VAC8YEL013W MSH1P25846 959 aa3.07□□□□□ -1.92
VAC8YEL013W SIP3P38717 1229 aa3.07□□□□□ -1.92
VAC8YEL013W IDP3P53982 420 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W ATG21Q02887 496 aa3.07□□□□□ -1.92
VAC8YEL013W BNA5Q05979 453 aa3.07□□□□□ -1.92
VAC8YEL013W RPN8Q08723 338 aaKnown RBP3.07□□□□□ -1.92
VAC8YEL013W LCB4Q12246 624 aa3.07□□□□□ -1.92
VAC8YEL013W YLR111WQ12528 110 aa3.07□□□□□ -1.92
VAC8YEL013W RAD3P06839 778 aa3.06□□□□□ -1.92
VAC8YEL013W RRP43P25359 394 aaPredicted RBP3.06□□□□□ -1.92
VAC8YEL013W RPF2P36160 344 aaKnown RBP3.06□□□□□ -1.92
VAC8YEL013W DSE1P40077 573 aa3.06□□□□□ -1.92
VAC8YEL013W CAB2P40506 365 aa3.06□□□□□ -1.92
VAC8YEL013W GAT1P43574 510 aa3.06□□□□□ -1.92
VAC8YEL013W BIR1P47134 954 aa3.06□□□□□ -1.92
VAC8YEL013W YPL108WQ02872 168 aaPredicted RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms