RNA–Protein interactions for RNA: YEL041W

YEF1, Transcript of ATP-NADH kinase, yeast

Gene YEF1, Length 1,488 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEF1	YEL041W	PCL5	P38794	229 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	SPL2	P38839	148 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	AFG3	P39925	761 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	JEM1	P40358	645 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	IRC24	P40580	263 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	SWP82	P43554	623 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	MSY1	P48527	492 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	STR3	P53101	465 aa	Known RBP	5.75	□□□□□ -1.49
YEF1	YEL041W	NNF2	P53253	936 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	GFD1	Q04839	188 aa	Known RBP	5.75	□□□□□ -1.49
YEF1	YEL041W	THI3	Q07471	609 aa		5.75	□□□□□ -1.49
YEF1	YEL041W	QCR6	P00127	147 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	WHI2	P12611	486 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	NAT1	P12945	854 aa	Known RBP	5.74	□□□□□ -1.49
YEF1	YEL041W	PMS1	P14242	873 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	VMA16	P23968	213 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	YSP3	P25036	478 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	GPI10	P30777	616 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	YHR218W	P38899	603 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	CCT6	P39079	546 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	YGR117C	P53270	476 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	COG2	P53271	262 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	RPT4	P53549	437 aa	Known RBP	5.74	□□□□□ -1.49
YEF1	YEL041W	YNL058C	P53947	316 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	YML053C	Q04978	212 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	BUD7	Q08754	746 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	LCB4	Q12246	624 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	CEX1	Q12453	761 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	YOL159C-A	Q3E769	90 aa		5.74	□□□□□ -1.49
YEF1	YEL041W	RNR3	P21672	869 aa	Known RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	ADK2	P26364	225 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	GDA1	P32621	518 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	NTR2	P36118	322 aa	Predicted RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	GLG1	P36143	616 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	YHL017W	P38745	532 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	GIP4	P39732	760 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	COQ6	P53318	479 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	VPS9	P54787	451 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	TRM44	Q02648	567 aa	Known RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	CSI1	Q04368	295 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	HEL2	Q05580	639 aa	Known RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	ECM22	Q05958	814 aa	Predicted RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	YPL191C	Q08930	360 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	APL5	Q08951	932 aa	Known RBP	5.73	□□□□□ -1.49
YEF1	YEL041W	YPL272C	Q08984	517 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	ZPS1	Q12512	249 aa		5.73	□□□□□ -1.49
YEF1	YEL041W	ARD1	P07347	238 aa	Predicted RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	ILS1	P09436	1072 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	PMI40	P29952	429 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	AAP1	P37898	856 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	SEC31	P38968	1273 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	LTP1	P40347	161 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	SSU1	P41930	458 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	CTK2	P46962	323 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	VID30	P53076	958 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	CIK1	Q01649	594 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	PRP42	Q03776	544 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	ARG7	Q04728	441 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	VPS38	Q05919	439 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	YLR345W	Q06137	509 aa		5.72	□□□□□ -1.49
YEF1	YEL041W	MDM20	Q12387	796 aa	Known RBP	5.72	□□□□□ -1.49
YEF1	YEL041W	TRM2	P33753	639 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	RFC1	P38630	861 aa	Known RBP	5.71	□□□□□ -1.49
YEF1	YEL041W	POP2	P39008	433 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	BDH2	P39713	417 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	RPS7B	P48164	190 aa	Known RBP	5.71	□□□□□ -1.49
YEF1	YEL041W	SGF73	P53165	657 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	AAT1	Q01802	451 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	RSM28	Q03430	361 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	YDR286C	Q05530	114 aa		5.71	□□□□□ -1.49
YEF1	YEL041W	SGT2	Q12118	346 aa	Known RBP	5.71	□□□□□ -1.49
YEF1	YEL041W	POM152	P39685	1337 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	CPA2	P03965	1118 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	SES1	P07284	462 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	HPR1	P17629	752 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	SRP54	P20424	541 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	MRPL9	P31334	269 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	SOF1	P33750	489 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	LHS1	P36016	881 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	CST26	P38226	397 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	VBA2	P38358	474 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	OTU2	P38747	307 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	PHM8	P40025	321 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	MRX1	P40050	688 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	BUR6	P40096	142 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	YIL089W	P40500	205 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
YEF1	YEL041W	IRC4	Q03036	179 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	PLM2	Q04383	521 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	ERB1	Q04660	807 aa	Known RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	PGC1	Q08959	321 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	FMP40	Q08968	688 aa	Predicted RBP	5.71	□□□□□ -1.5
YEF1	YEL041W	PLP2	Q12017	286 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	ATG29	Q12092	213 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	AVL9	Q12500	764 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	Q0010	Q9ZZX9	128 aa		5.71	□□□□□ -1.5
YEF1	YEL041W	FLO11	P08640	1367 aa		5.7	□□□□□ -1.5
YEF1	YEL041W	HXK2	P04807	486 aa	Known RBP	5.7	□□□□□ -1.5
YEF1	YEL041W	EST1	P17214	699 aa	Predicted RBP	5.7	□□□□□ -1.5
YEF1	YEL041W	GCS1	P35197	352 aa		5.7	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms