RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A RPL4AP10664 362 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A CPR1P14832 162 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A ATG15P25641 520 aa0□□□□□ -2.41
TFB5YDR079C-A DID4P36108 232 aa0□□□□□ -2.41
TFB5YDR079C-A OCA5P38738 679 aa0□□□□□ -2.41
TFB5YDR079C-A YCF1P39109 1515 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A LSM4P40070 187 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A RPS29AP41057 56 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A RPL4BP49626 362 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A YOR1P53049 1477 aa0□□□□□ -2.41
TFB5YDR079C-A RRT6P53117 311 aaPredicted RBP0□□□□□ -2.41
TFB5YDR079C-A SAM50P53969 484 aa0□□□□□ -2.41
TFB5YDR079C-A SUR7P54003 302 aa0□□□□□ -2.41
TFB5YDR079C-A RSN1Q03516 953 aa0□□□□□ -2.41
TFB5YDR079C-A SYF1Q04048 859 aaPredicted RBP0□□□□□ -2.41
TFB5YDR079C-A TUS1Q06412 1307 aa0□□□□□ -2.41
TFB5YDR079C-A YPL278CQ08990 100 aa0□□□□□ -2.41
TFB5YDR079C-A YPK9Q12697 1472 aa0□□□□□ -2.41
TFB5YDR079C-A PGA3Q12746 312 aaKnown RBP0□□□□□ -2.41
TFB5YDR079C-A IML1P47170 1584 aa-0.01□□□□□ -2.41
TFB5YDR079C-A PDR5P33302 1511 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A SPT7P35177 1332 aa-0.01□□□□□ -2.41
TFB5YDR079C-A PET111P08468 800 aa-0.01□□□□□ -2.41
TFB5YDR079C-A FRD1P32614 470 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A WBP1P33767 430 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A UIP5P36137 443 aa-0.01□□□□□ -2.41
TFB5YDR079C-A UME6P39001 836 aa-0.01□□□□□ -2.41
TFB5YDR079C-A SEO1P39709 593 aa-0.01□□□□□ -2.41
TFB5YDR079C-A CSM2P40465 213 aa-0.01□□□□□ -2.41
TFB5YDR079C-A MNN11P46985 422 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A ASG7P46993 209 aa-0.01□□□□□ -2.41
TFB5YDR079C-A TRF5P48561 642 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A HFA1P32874 2273 aa-0.01□□□□□ -2.41
TFB5YDR079C-A URA2P07259 2214 aaKnown RBP-0.01□□□□□ -2.41
TFB5YDR079C-A XRN1P22147 1528 aaKnown RBP-0.02□□□□□ -2.41
TFB5YDR079C-A VTH1P40438 1549 aa-0.02□□□□□ -2.41
TFB5YDR079C-A VTH2P40890 1549 aa-0.02□□□□□ -2.41
TFB5YDR079C-A GDB1Q06625 1536 aa-0.02□□□□□ -2.41
TFB5YDR079C-A BCK1Q01389 1478 aa-0.02□□□□□ -2.41
TFB5YDR079C-A PDR11P40550 1411 aa-0.02□□□□□ -2.41
TFB5YDR079C-A TRM732Q03496 1420 aa-0.02□□□□□ -2.41
TFB5YDR079C-A PSK1P31374 1356 aa-0.02□□□□□ -2.41
TFB5YDR079C-A MSB2P32334 1306 aa-0.02□□□□□ -2.41
TFB5YDR079C-A SSM4P40318 1319 aa-0.02□□□□□ -2.41
TFB5YDR079C-A RIP1P08067 215 aa-0.02□□□□□ -2.41
TFB5YDR079C-A LPD1P09624 499 aaKnown RBP-0.02□□□□□ -2.41
TFB5YDR079C-A YEF3P16521 1044 aaKnown RBP-0.02□□□□□ -2.41
TFB5YDR079C-A PET123P17558 318 aa-0.02□□□□□ -2.41
TFB5YDR079C-A YCK1P23291 538 aa-0.02□□□□□ -2.41
TFB5YDR079C-A YSP3P25036 478 aa-0.02□□□□□ -2.41
TFB5YDR079C-A SYN8P31377 255 aa-0.02□□□□□ -2.41
TFB5YDR079C-A SER1P33330 395 aaKnown RBP-0.02□□□□□ -2.41
TFB5YDR079C-A RSM22P36056 628 aa-0.02□□□□□ -2.41
TFB5YDR079C-A HEL1P36113 551 aa-0.02□□□□□ -2.41
TFB5YDR079C-A TRS20P38334 175 aa-0.02□□□□□ -2.41
TFB5YDR079C-A SHC1P39000 512 aa-0.02□□□□□ -2.41
TFB5YDR079C-A RCY1P39531 840 aa-0.02□□□□□ -2.41
TFB5YDR079C-A SLZ1P40167 298 aa-0.02□□□□□ -2.41
TFB5YDR079C-A ALG8P40351 577 aa-0.02□□□□□ -2.41
TFB5YDR079C-A DOT5P40553 215 aa-0.02□□□□□ -2.41
TFB5YDR079C-A YNR061CP53747 219 aa-0.02□□□□□ -2.41
TFB5YDR079C-A INN1P53901 409 aa-0.02□□□□□ -2.41
TFB5YDR079C-A VPS71Q03433 280 aa-0.02□□□□□ -2.41
TFB5YDR079C-A RCO1Q04779 684 aa-0.02□□□□□ -2.41
TFB5YDR079C-A AIM6Q07716 390 aa-0.02□□□□□ -2.41
TFB5YDR079C-A YPL272CQ08984 517 aa-0.02□□□□□ -2.41
TFB5YDR079C-A YDR018CQ12185 396 aa-0.02□□□□□ -2.41
TFB5YDR079C-A CTF3Q12748 733 aa-0.02□□□□□ -2.41
TFB5YDR079C-A MEX67Q99257 599 aaKnown RBP-0.02□□□□□ -2.41
TFB5YDR079C-A YSP2Q06681 1438 aa-0.03□□□□□ -2.41
TFB5YDR079C-A YRF1-4O13559 1382 aa-0.03□□□□□ -2.41
TFB5YDR079C-A MHP1P43638 1398 aa-0.03□□□□□ -2.41
TFB5YDR079C-A TOP1P04786 769 aa-0.03□□□□□ -2.41
TFB5YDR079C-A PFK2P16862 959 aaKnown RBP RIP-Chip data-0.03□□□□□ -2.41not detected
TFB5YDR079C-A MSM1P22438 575 aa-0.03□□□□□ -2.41
TFB5YDR079C-A PUP3P25451 205 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A THI4P32318 326 aa-0.03□□□□□ -2.41
TFB5YDR079C-A ECM25P32525 599 aa-0.03□□□□□ -2.41
TFB5YDR079C-A FMT1P32785 401 aa-0.03□□□□□ -2.41
TFB5YDR079C-A YKL102CP34249 101 aa-0.03□□□□□ -2.41
TFB5YDR079C-A MPE1P35728 441 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A VPS52P39904 641 aa-0.03□□□□□ -2.41
TFB5YDR079C-A SPO73P40031 143 aa-0.03□□□□□ -2.41
TFB5YDR079C-A SHO1P40073 367 aa-0.03□□□□□ -2.41
TFB5YDR079C-A JEM1P40358 645 aa-0.03□□□□□ -2.41
TFB5YDR079C-A NUP82P40368 713 aa-0.03□□□□□ -2.41
TFB5YDR079C-A YJR008WP47085 338 aa-0.03□□□□□ -2.41
TFB5YDR079C-A JHD2P47156 728 aaPredicted RBP-0.03□□□□□ -2.41
TFB5YDR079C-A DUO1P53168 247 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A YGR117CP53270 476 aa-0.03□□□□□ -2.41
TFB5YDR079C-A SDA1P53313 767 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A ORC1P54784 914 aaPredicted RBP-0.03□□□□□ -2.41
TFB5YDR079C-A DIG2Q03373 323 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A ADH6Q04894 360 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A ECM7Q06200 448 aa-0.03□□□□□ -2.41
TFB5YDR079C-A ESA1Q08649 445 aa-0.03□□□□□ -2.41
TFB5YDR079C-A YDL211CQ12121 372 aa-0.03□□□□□ -2.41
TFB5YDR079C-A ATO3Q12359 275 aa-0.03□□□□□ -2.41
TFB5YDR079C-A RPA190P10964 1664 aaKnown RBP-0.03□□□□□ -2.41
TFB5YDR079C-A PEP1P32319 1579 aa-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms