Protein–RNA interactions for Protein: Q03433

VPS71, Vacuolar protein sorting-associated protein 71, yeastyeast

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS71Q03433 YML009W-BYML009W-B 477 nt15.76■□□□□ 0.11
VPS71Q03433 NOP1YDL014W 984 nt15.43■□□□□ 0.06
VPS71Q03433 NSR1YGR159C 1245 nt15.4■□□□□ 0.06
VPS71Q03433 YKL036CYKL036C 393 nt14.53□□□□□ -0.08
VPS71Q03433 YJL027CYJL027C 417 nt13.63□□□□□ -0.23
VPS71Q03433 Q0297Q0297 156 nt13.61□□□□□ -0.23
VPS71Q03433 MDJ1YFL016C 1536 nt13.58□□□□□ -0.24
VPS71Q03433 SRX1YKL086W 384 nt13.5□□□□□ -0.25
VPS71Q03433 SCS3YGL126W 1143 nt13.38□□□□□ -0.27
VPS71Q03433 YCR051WYCR051W 669 nt12.84□□□□□ -0.35
VPS71Q03433 YOL085CYOL085C 342 nt12.58□□□□□ -0.4
VPS71Q03433 PKP1YIL042C 1185 nt12.37□□□□□ -0.43
VPS71Q03433 SCJ1YMR214W 1134 nt12.22□□□□□ -0.45
VPS71Q03433 RPP1BYDL130W 321 nt12.21□□□□□ -0.45
VPS71Q03433 SSA3YBL075C 1950 nt12.21□□□□□ -0.46
VPS71Q03433 ATS1YAL020C 1002 nt12.06□□□□□ -0.48
VPS71Q03433 TRN1tP(UGG)A 72 nt12.02□□□□□ -0.49
VPS71Q03433 SUF9tP(UGG)F 72 nt12.02□□□□□ -0.49
VPS71Q03433 SUF8tP(UGG)H 72 nt12.02□□□□□ -0.49
VPS71Q03433 tP(UGG)LtP(UGG)L 72 nt12.02□□□□□ -0.49
VPS71Q03433 SUF7tP(UGG)M 72 nt12.02□□□□□ -0.49
VPS71Q03433 tP(UGG)N1tP(UGG)N1 72 nt12.02□□□□□ -0.49
VPS71Q03433 tP(UGG)N2tP(UGG)N2 72 nt12.02□□□□□ -0.49
VPS71Q03433 tP(UGG)O1tP(UGG)O1 72 nt12.02□□□□□ -0.49
VPS71Q03433 SUF11tP(UGG)O2 72 nt12.02□□□□□ -0.49
VPS71Q03433 DBP2YNL112W 1641 nt11.97□□□□□ -0.49
VPS71Q03433 CCC1YLR220W 969 nt11.93□□□□□ -0.5
VPS71Q03433 YBR190WYBR190W 312 nt11.77□□□□□ -0.53
VPS71Q03433 PET122YER153C 765 nt11.63□□□□□ -0.55
VPS71Q03433 SCR1SCR1 522 nt11.59□□□□□ -0.55
VPS71Q03433 tP(UGG)O3tP(UGG)O3 72 nt11.48□□□□□ -0.57
VPS71Q03433 RTC3YHR087W 336 nt11.47□□□□□ -0.57
VPS71Q03433 RRN5YLR141W 1092 nt11.35□□□□□ -0.59
VPS71Q03433 RVS167YDR388W 1449 nt11.31□□□□□ -0.6
VPS71Q03433 PUT4YOR348C 1884 nt11.21□□□□□ -0.61
VPS71Q03433 RSB1YOR049C 1065 nt11.2□□□□□ -0.62
VPS71Q03433 PST2YDR032C 597 nt11.12□□□□□ -0.63
VPS71Q03433 YER088W-BYER088W-B 147 nt11.11□□□□□ -0.63
VPS71Q03433 YDJ1YNL064C 1230 nt11.08□□□□□ -0.64
VPS71Q03433 SHR5YOL110W 714 nt10.99□□□□□ -0.65
VPS71Q03433 YKL097CYKL097C 411 nt10.83□□□□□ -0.68
VPS71Q03433 GAR1YHR089C 618 nt10.81□□□□□ -0.68
VPS71Q03433 POA1YBR022W 534 nt10.8□□□□□ -0.68
VPS71Q03433 ARE1YCR048W 1833 nt10.79□□□□□ -0.68
VPS71Q03433 SPT5YML010W 3192 nt10.73□□□□□ -0.69
VPS71Q03433 SSA4YER103W 1929 nt10.7□□□□□ -0.7
VPS71Q03433 BSC6YOL137W 1494 nt10.7□□□□□ -0.7
VPS71Q03433 YHR049C-AYHR049C-A 297 nt10.66□□□□□ -0.7
VPS71Q03433 SHU1YHL006C 453 nt10.6□□□□□ -0.71
VPS71Q03433 DEP1YAL013W 1218 nt10.6□□□□□ -0.71
VPS71Q03433 SAH1YER043C 1350 nt10.57□□□□□ -0.72
VPS71Q03433 URN1YPR152C 1398 nt10.51□□□□□ -0.73
VPS71Q03433 OPI9YLR338W 858 nt10.47□□□□□ -0.73
VPS71Q03433 YNL208WYNL208W 600 nt10.45□□□□□ -0.74
VPS71Q03433 TIR1YER011W 765 nt10.43□□□□□ -0.74
VPS71Q03433 RPN10YHR200W 807 nt10.4□□□□□ -0.74
VPS71Q03433 BDF1YLR399C 2061 nt10.37□□□□□ -0.75
VPS71Q03433 BUD23YCR047C 828 nt10.36□□□□□ -0.75
VPS71Q03433 YAL037C-BYAL037C-B 975 nt10.36□□□□□ -0.75
VPS71Q03433 YOR139CYOR139C 393 nt10.35□□□□□ -0.75
VPS71Q03433 SSA1YAL005C 1929 nt10.25□□□□□ -0.77
VPS71Q03433 TAT1YBR069C 1860 nt10.21□□□□□ -0.77
VPS71Q03433 NPL3YDR432W 1245 nt10.18□□□□□ -0.78
VPS71Q03433 PAC11YDR488C 1602 nt10.18□□□□□ -0.78
VPS71Q03433 PUN1YLR414C 792 nt10.17□□□□□ -0.78
VPS71Q03433 PTC2YER089C 1395 nt10.15□□□□□ -0.78
VPS71Q03433 SRB2YHR041C 633 nt10.14□□□□□ -0.79
VPS71Q03433 MEP2YNL142W 1500 nt10.12□□□□□ -0.79
VPS71Q03433 NAB2YGL122C 1578 nt10.12□□□□□ -0.79
VPS71Q03433 YJR018WYJR018W 363 nt10.05□□□□□ -0.8
VPS71Q03433 YGR021WYGR021W 873 nt10.04□□□□□ -0.8
VPS71Q03433 WWM1YFL010C 636 nt10.03□□□□□ -0.8
VPS71Q03433 MNP1YGL068W 585 nt10.03□□□□□ -0.8
VPS71Q03433 HOM6YJR139C 1080 nt10.03□□□□□ -0.8
VPS71Q03433 YOL037CYOL037C 354 nt9.96□□□□□ -0.82
VPS71Q03433 YJR120WYJR120W 351 nt9.95□□□□□ -0.82
VPS71Q03433 DCW1YKL046C 1350 nt9.94□□□□□ -0.82
VPS71Q03433 tM(CAU)CtM(CAU)C 72 nt9.92□□□□□ -0.82
VPS71Q03433 IMT4tM(CAU)E 72 nt9.92□□□□□ -0.82
VPS71Q03433 IMT3tM(CAU)J3 72 nt9.92□□□□□ -0.82
VPS71Q03433 IMT1tM(CAU)O1 72 nt9.92□□□□□ -0.82
VPS71Q03433 IMT2tM(CAU)P 72 nt9.92□□□□□ -0.82
VPS71Q03433 RPP2BYDR382W 333 nt9.91□□□□□ -0.82
VPS71Q03433 FIS1YIL065C 468 nt9.9□□□□□ -0.82
VPS71Q03433 NVJ2YPR091C 2313 nt9.89□□□□□ -0.83
VPS71Q03433 RKM5YLR137W 1104 nt9.88□□□□□ -0.83
VPS71Q03433 DAL1YIR027C 1383 nt9.86□□□□□ -0.83
VPS71Q03433 YBR220CYBR220C 1683 nt9.85□□□□□ -0.83
VPS71Q03433 YFL021C-AYFL021C-A 855 nt9.84□□□□□ -0.83
VPS71Q03433 YPS1YLR120C 1710 nt9.82□□□□□ -0.84
VPS71Q03433 YMR090WYMR090W 684 nt9.81□□□□□ -0.84
VPS71Q03433 FPR4YLR449W 1179 nt9.8□□□□□ -0.84
VPS71Q03433 EMI2YDR516C 1503 nt9.8□□□□□ -0.84
VPS71Q03433 BDH2YAL061W 1254 nt9.77□□□□□ -0.85
VPS71Q03433 PHO4YFR034C 939 nt9.76□□□□□ -0.85
VPS71Q03433 YHR165W-AYHR165W-A 312 nt9.76□□□□□ -0.85
VPS71Q03433 PUS2YGL063W 1113 nt9.75□□□□□ -0.85
VPS71Q03433 YLR281CYLR281C 468 nt9.73□□□□□ -0.85
VPS71Q03433 FPS1YLL043W 2010 nt9.72□□□□□ -0.85
VPS71Q03433 LSM3YLR438C-A 270 nt9.71□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms