RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YPR172WQ06608 200 aa4.03□□□□□ -1.76
PUB1YNL016W PUS7Q08647 676 aaKnown RBP4.03□□□□□ -1.76
PUB1YNL016W GPB1Q08886 897 aa4.03□□□□□ -1.76
PUB1YNL016W PET122P10355 254 aa4.02□□□□□ -1.77
PUB1YNL016W SAM1P10659 382 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W PYC1P11154 1178 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W HNM1P19807 563 aa4.02□□□□□ -1.77
PUB1YNL016W SNT1P25357 1226 aa4.02□□□□□ -1.77
PUB1YNL016W ERV1P27882 189 aa4.02□□□□□ -1.77
PUB1YNL016W PRE4P30657 266 aa4.02□□□□□ -1.77
PUB1YNL016W LTV1P34078 463 aa4.02□□□□□ -1.77
PUB1YNL016W SHP1P34223 423 aa4.02□□□□□ -1.77
PUB1YNL016W COY1P34237 679 aa4.02□□□□□ -1.77
PUB1YNL016W MAE1P36013 669 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W ALY1P36117 915 aa4.02□□□□□ -1.77
PUB1YNL016W GPT2P36148 743 aa4.02□□□□□ -1.77
PUB1YNL016W REG2P38232 338 aa4.02□□□□□ -1.77
PUB1YNL016W YHR054CP38780 354 aa4.02□□□□□ -1.77
PUB1YNL016W YDR089WP38966 869 aa4.02□□□□□ -1.77
PUB1YNL016W SMC2P38989 1170 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W MEF2P39677 819 aa4.02□□□□□ -1.77
PUB1YNL016W ARB1P40024 610 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W YIL108WP40483 696 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W PXA1P41909 870 aa4.02□□□□□ -1.77
PUB1YNL016W SSY5P47002 699 aa4.02□□□□□ -1.77
PUB1YNL016W YDL183CP48569 320 aa4.02□□□□□ -1.77
PUB1YNL016W YGL039WP53183 348 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W YGR066CP53242 292 aa4.02□□□□□ -1.77
PUB1YNL016W YGR130CP53278 816 aa4.02□□□□□ -1.77
PUB1YNL016W SOL4P53315 255 aa4.02□□□□□ -1.77
PUB1YNL016W ARP5P53946 755 aa4.02□□□□□ -1.77
PUB1YNL016W TOF2Q02208 771 aa4.02□□□□□ -1.77
PUB1YNL016W SSL1Q04673 461 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W SOV1Q04748 898 aa4.02□□□□□ -1.77
PUB1YNL016W ROY1Q04847 553 aa4.02□□□□□ -1.77
PUB1YNL016W ASM4Q05166 528 aa4.02□□□□□ -1.77
PUB1YNL016W RQC1Q05468 723 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W SPH1Q06160 661 aa4.02□□□□□ -1.77
PUB1YNL016W YLR456WQ06199 204 aa4.02□□□□□ -1.77
PUB1YNL016W NOP6Q07623 225 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W AIM6Q07716 390 aa4.02□□□□□ -1.77
PUB1YNL016W NUS1Q12063 375 aa4.02□□□□□ -1.77
PUB1YNL016W LAM4P38800 1345 aa4.02□□□□□ -1.77
PUB1YNL016W ATP2P00830 511 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W DAP2P18962 818 aa4.02□□□□□ -1.77
PUB1YNL016W SAM2P19358 384 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W NAR1P23503 491 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W RRP43P25359 394 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W PAP1P29468 568 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W KES1P35844 434 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W CAB3P36076 571 aa4.02□□□□□ -1.77
PUB1YNL016W GEX2P36173 615 aa4.02□□□□□ -1.77
PUB1YNL016W PHO88P38264 188 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W YSW1P38280 609 aa4.02□□□□□ -1.77
PUB1YNL016W MUP3P38734 546 aa4.02□□□□□ -1.77
PUB1YNL016W RRM3P38766 723 aa4.02□□□□□ -1.77
PUB1YNL016W CTF8P38877 133 aa4.02□□□□□ -1.77
PUB1YNL016W CCT6P39079 546 aa4.02□□□□□ -1.77
PUB1YNL016W SLZ1P40167 298 aa4.02□□□□□ -1.77
PUB1YNL016W CAK1P43568 368 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W STU2P46675 888 aa4.02□□□□□ -1.77
PUB1YNL016W ALT2P52892 507 aa4.02□□□□□ -1.77
PUB1YNL016W YGR266WP53326 701 aa4.02□□□□□ -1.77
PUB1YNL016W RPA49Q01080 415 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W HMO1Q03973 246 aaKnown RBP4.02□□□□□ -1.77
PUB1YNL016W YMR321CQ04898 105 aa4.02□□□□□ -1.77
PUB1YNL016W YEH1Q07804 573 aa4.02□□□□□ -1.77
PUB1YNL016W PML1Q07930 204 aaPredicted RBP4.02□□□□□ -1.77
PUB1YNL016W SVS1Q12254 260 aa4.02□□□□□ -1.77
PUB1YNL016W SPE4Q12455 300 aa4.02□□□□□ -1.77
PUB1YNL016W SEC39Q12745 709 aa4.02□□□□□ -1.77
PUB1YNL016W AFI1Q99222 893 aa4.02□□□□□ -1.77
PUB1YNL016W SOD2P00447 233 aa4.01□□□□□ -1.77
PUB1YNL016W RPL1AP0CX43 217 aaKnown RBP4.01□□□□□ -1.77
PUB1YNL016W RPL1BP0CX44 217 aaKnown RBP4.01□□□□□ -1.77
PUB1YNL016W SAM35P14693 329 aa4.01□□□□□ -1.77
PUB1YNL016W YJU2P28320 278 aaPredicted RBP4.01□□□□□ -1.77
PUB1YNL016W SYN8P31377 255 aa4.01□□□□□ -1.77
PUB1YNL016W SRB2P34162 210 aa4.01□□□□□ -1.77
PUB1YNL016W DBP7P36120 742 aaKnown RBP4.01□□□□□ -1.77
PUB1YNL016W MRPL40P36534 297 aa4.01□□□□□ -1.77
PUB1YNL016W OTU2P38747 307 aaKnown RBP4.01□□□□□ -1.77
PUB1YNL016W VFA1P40080 203 aa4.01□□□□□ -1.77
PUB1YNL016W ZAP1P47043 880 aa4.01□□□□□ -1.77
PUB1YNL016W MTR3P48240 250 aaPredicted RBP4.01□□□□□ -1.77
PUB1YNL016W ASE1P50275 885 aa4.01□□□□□ -1.77
PUB1YNL016W MDR1P53258 950 aa4.01□□□□□ -1.77
PUB1YNL016W MRD1Q06106 887 aaKnown RBP4.01□□□□□ -1.77
PUB1YNL016W VPS36Q06696 566 aa4.01□□□□□ -1.77
PUB1YNL016W CDA1Q06702 301 aa4.01□□□□□ -1.77
PUB1YNL016W TMA16Q08687 178 aa4.01□□□□□ -1.77
PUB1YNL016W YPL272CQ08984 517 aa4.01□□□□□ -1.77
PUB1YNL016W ATG29Q12092 213 aa4.01□□□□□ -1.77
PUB1YNL016W ERP3Q12403 225 aa4.01□□□□□ -1.77
PUB1YNL016W TRM11Q12463 433 aa4.01□□□□□ -1.77
PUB1YNL016W TEL1P38110 2787 aa4□□□□□ -1.77
PUB1YNL016W HOM2P13663 365 aaKnown RBP4□□□□□ -1.77
PUB1YNL016W GRR1P24814 1151 aa4□□□□□ -1.77
PUB1YNL016W MCM4P30665 933 aaKnown RBP4□□□□□ -1.77
PUB1YNL016W KTR3P38130 404 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms