RNA–Protein interactions for RNA: YLL011W

SOF1, Transcript of Protein required for biogenesis of 40S (small) ribosomal subunit, yeastyeast

Gene SOF1, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOF1YLL011W STR3P53101 465 aaKnown RBP4.49□□□□□ -1.69
SOF1YLL011W TWF1P53250 332 aa4.49□□□□□ -1.69
SOF1YLL011W HPF1Q05164 967 aa4.49□□□□□ -1.69
SOF1YLL011W DON1Q05610 365 aa4.49□□□□□ -1.69
SOF1YLL011W ATG23Q06671 453 aa4.49□□□□□ -1.69
SOF1YLL011W DCI1Q08558 271 aa4.49□□□□□ -1.69
SOF1YLL011W YBT1P32386 1661 aa4.48□□□□□ -1.69
SOF1YLL011W TY1B-NL2Q99337 1749 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W YMR084WA2P2R3 262 aa4.48□□□□□ -1.69
SOF1YLL011W RPL1AP0CX43 217 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W RPL1BP0CX44 217 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W PDE1P22434 369 aa4.48□□□□□ -1.69
SOF1YLL011W VMA16P23968 213 aa4.48□□□□□ -1.69
SOF1YLL011W BUD14P27637 709 aa4.48□□□□□ -1.69
SOF1YLL011W SUR1P33300 382 aa4.48□□□□□ -1.69
SOF1YLL011W WBP1P33767 430 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W LTV1P34078 463 aa4.48□□□□□ -1.69
SOF1YLL011W MRPL7P36519 292 aa4.48□□□□□ -1.69
SOF1YLL011W MTG2P38860 518 aa4.48□□□□□ -1.69
SOF1YLL011W LNP1P38878 278 aa4.48□□□□□ -1.69
SOF1YLL011W VPS41P38959 992 aa4.48□□□□□ -1.69
SOF1YLL011W MRX1P40050 688 aa4.48□□□□□ -1.69
SOF1YLL011W PKP1P40530 394 aa4.48□□□□□ -1.69
SOF1YLL011W IRC8P47046 822 aa4.48□□□□□ -1.69
SOF1YLL011W IMD4P50094 524 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W MNP1P53163 194 aaPredicted RBP4.48□□□□□ -1.69
SOF1YLL011W ERV25P54837 211 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W INA17Q02888 182 aa4.48□□□□□ -1.69
SOF1YLL011W RBS1Q05672 457 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W DBP9Q06218 594 aaKnown RBP4.48□□□□□ -1.69
SOF1YLL011W CRN1Q06440 651 aa4.48□□□□□ -1.69
SOF1YLL011W FRE5Q08908 694 aa4.48□□□□□ -1.69
SOF1YLL011W CFT2Q12102 859 aaPredicted RBP4.48□□□□□ -1.69
SOF1YLL011W RLM1Q12224 676 aa4.48□□□□□ -1.69
SOF1YLL011W YER175W-AQ8TGU4 54 aa4.48□□□□□ -1.69
SOF1YLL011W CAD1P24813 409 aaKnown RBP4.47□□□□□ -1.69
SOF1YLL011W COQ2P32378 372 aa4.47□□□□□ -1.69
SOF1YLL011W HXT3P32466 567 aaKnown RBP4.47□□□□□ -1.69
SOF1YLL011W PDB1P32473 366 aaKnown RBP4.47□□□□□ -1.69
SOF1YLL011W MRE11P32829 692 aa4.47□□□□□ -1.69
SOF1YLL011W PCH2P38126 564 aa4.47□□□□□ -1.69
SOF1YLL011W SDH8P38345 138 aa4.47□□□□□ -1.69
SOF1YLL011W BAP3P41815 604 aa4.47□□□□□ -1.69
SOF1YLL011W MPS3P47069 682 aa4.47□□□□□ -1.69
SOF1YLL011W SHE4P51534 789 aa4.47□□□□□ -1.69
SOF1YLL011W ALT2P52892 507 aa4.47□□□□□ -1.69
SOF1YLL011W FHN1P53279 174 aa4.47□□□□□ -1.69
SOF1YLL011W PRO2P54885 456 aaKnown RBP4.47□□□□□ -1.69
SOF1YLL011W YAT1P80235 687 aa4.47□□□□□ -1.69
SOF1YLL011W PHO92Q06390 306 aa4.47□□□□□ -1.69
SOF1YLL011W SWA2Q06677 668 aa4.47□□□□□ -1.69
SOF1YLL011W FMP40Q08968 688 aaPredicted RBP4.47□□□□□ -1.69
SOF1YLL011W YBR255C-AQ3E776 120 aa4.47□□□□□ -1.69
SOF1YLL011W IML1P47170 1584 aa4.46□□□□□ -1.69
SOF1YLL011W CDC6P09119 513 aa4.46□□□□□ -1.7
SOF1YLL011W PDA1P16387 420 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W DAP2P18962 818 aa4.46□□□□□ -1.7
SOF1YLL011W SSE1P32589 693 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W SLM4P38247 162 aa4.46□□□□□ -1.7
SOF1YLL011W WSS1P38838 269 aa4.46□□□□□ -1.7
SOF1YLL011W ICP55P40051 511 aa4.46□□□□□ -1.7
SOF1YLL011W BUR6P40096 142 aa4.46□□□□□ -1.7
SOF1YLL011W SWP82P43554 623 aa4.46□□□□□ -1.7
SOF1YLL011W STU2P46675 888 aa4.46□□□□□ -1.7
SOF1YLL011W PDR16P53860 351 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W IPI3P53877 555 aa4.46□□□□□ -1.7
SOF1YLL011W RHO5P53879 331 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W RIA1P53893 1110 aa4.46□□□□□ -1.7
SOF1YLL011W ALF1P53904 254 aa4.46□□□□□ -1.7
SOF1YLL011W BOP3P53958 396 aa4.46□□□□□ -1.7
SOF1YLL011W RSM28Q03430 361 aa4.46□□□□□ -1.7
SOF1YLL011W VTA1Q06263 330 aa4.46□□□□□ -1.7
SOF1YLL011W TDA6Q06466 467 aa4.46□□□□□ -1.7
SOF1YLL011W IZH3Q07959 543 aa4.46□□□□□ -1.7
SOF1YLL011W VPS54Q12071 889 aa4.46□□□□□ -1.7
SOF1YLL011W RTC5Q12108 567 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W SGT2Q12118 346 aaKnown RBP4.46□□□□□ -1.7
SOF1YLL011W HER1Q12276 1246 aa4.46□□□□□ -1.7
SOF1YLL011W MF(ALPHA)1P01149 165 aa4.45□□□□□ -1.7
SOF1YLL011W AI1P03875 834 aa4.45□□□□□ -1.7
SOF1YLL011W LPD1P09624 499 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W APN1P22936 367 aa4.45□□□□□ -1.7
SOF1YLL011W GRR1P24814 1151 aa4.45□□□□□ -1.7
SOF1YLL011W SNT1P25357 1226 aa4.45□□□□□ -1.7
SOF1YLL011W RRP43P25359 394 aaPredicted RBP4.45□□□□□ -1.7
SOF1YLL011W GBP2P25555 427 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SOF1YLL011W KAR4P25583 335 aa4.45□□□□□ -1.7
SOF1YLL011W DAL80P26343 269 aa4.45□□□□□ -1.7
SOF1YLL011W GAR1P28007 205 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W NTH1P32356 751 aa4.45□□□□□ -1.7
SOF1YLL011W NIP1P32497 812 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W YME2P32843 850 aa4.45□□□□□ -1.7
SOF1YLL011W TIF3P34167 436 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W ELF1P36053 145 aa4.45□□□□□ -1.7
SOF1YLL011W MCX1P38323 520 aaPredicted RBP4.45□□□□□ -1.7
SOF1YLL011W YNG2P38806 282 aaKnown RBP4.45□□□□□ -1.7
SOF1YLL011W HRB1P38922 454 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
SOF1YLL011W YIR042CP40586 236 aa4.45□□□□□ -1.7
SOF1YLL011W VPS62P53285 467 aa4.45□□□□□ -1.7
SOF1YLL011W DAK1P54838 584 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms