RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W URA1P28272 314 aaPredicted RBP4.79□□□□□ -1.64
SPT3YDR392W CDC11P32458 415 aa4.79□□□□□ -1.64
SPT3YDR392W NGG1P32494 702 aa4.79□□□□□ -1.64
SPT3YDR392W SPR1P32603 445 aa4.79□□□□□ -1.64
SPT3YDR392W YSC83P32792 385 aa4.79□□□□□ -1.64
SPT3YDR392W SLZ1P40167 298 aa4.79□□□□□ -1.64
SPT3YDR392W FKH2P41813 862 aa4.79□□□□□ -1.64
SPT3YDR392W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
SPT3YDR392W CCW14O13547 238 aa4.78□□□□□ -1.64
SPT3YDR392W TUP1P16649 713 aa4.78□□□□□ -1.64
SPT3YDR392W CDC43P18898 376 aa4.78□□□□□ -1.64
SPT3YDR392W GEX1P25596 615 aa4.78□□□□□ -1.64
SPT3YDR392W PET309P32522 965 aaPredicted RBP4.78□□□□□ -1.64
SPT3YDR392W GEX2P36173 615 aa4.78□□□□□ -1.64
SPT3YDR392W MRPL15P36523 253 aa4.78□□□□□ -1.64
SPT3YDR392W BST1P43571 1029 aa4.78□□□□□ -1.64
SPT3YDR392W YJR054WP47114 497 aa4.78□□□□□ -1.64
SPT3YDR392W JHD2P47156 728 aaPredicted RBP4.78□□□□□ -1.64
SPT3YDR392W PUS2P53167 370 aa4.78□□□□□ -1.64
SPT3YDR392W RRN11Q04712 507 aa4.78□□□□□ -1.64
SPT3YDR392W FUS2Q05670 677 aa4.78□□□□□ -1.64
SPT3YDR392W CRR1Q05790 422 aa4.78□□□□□ -1.64
SPT3YDR392W YLR046CQ12253 270 aa4.78□□□□□ -1.64
SPT3YDR392W HOP1P20050 605 aa4.77□□□□□ -1.65
SPT3YDR392W SWI4P25302 1093 aaKnown RBP4.77□□□□□ -1.65
SPT3YDR392W IMG1P25626 169 aa4.77□□□□□ -1.65
SPT3YDR392W HBS1P32769 611 aaKnown RBP4.77□□□□□ -1.65
SPT3YDR392W UBC6P33296 250 aaPredicted RBP4.77□□□□□ -1.65
SPT3YDR392W EMC3P36039 253 aa4.77□□□□□ -1.65
SPT3YDR392W MNN4P36044 1178 aa4.77□□□□□ -1.65
SPT3YDR392W DSE1P40077 573 aa4.77□□□□□ -1.65
SPT3YDR392W VHR1P40522 640 aa4.77□□□□□ -1.65
SPT3YDR392W SGF73P53165 657 aa4.77□□□□□ -1.65
SPT3YDR392W RET3P53600 189 aa4.77□□□□□ -1.65
SPT3YDR392W NUP53Q03790 475 aa4.77□□□□□ -1.65
SPT3YDR392W PEX15Q08215 383 aa4.77□□□□□ -1.65
SPT3YDR392W AKR2Q12013 749 aa4.77□□□□□ -1.65
SPT3YDR392W CYR1P08678 2026 aaKnown RBP4.77□□□□□ -1.65
SPT3YDR392W CDC26P14724 124 aa4.76□□□□□ -1.65
SPT3YDR392W ILV6P25605 309 aaKnown RBP4.76□□□□□ -1.65
SPT3YDR392W ORC2P32833 620 aa4.76□□□□□ -1.65
SPT3YDR392W SEC6P32844 805 aa4.76□□□□□ -1.65
SPT3YDR392W YKL102CP34249 101 aa4.76□□□□□ -1.65
SPT3YDR392W YEL057CP39983 233 aa4.76□□□□□ -1.65
SPT3YDR392W TRM9P49957 279 aa4.76□□□□□ -1.65
SPT3YDR392W MAL11P53048 616 aa4.76□□□□□ -1.65
SPT3YDR392W ASI2P53895 289 aa4.76□□□□□ -1.65
SPT3YDR392W PIR1Q03178 341 aa4.76□□□□□ -1.65
SPT3YDR392W YMR178WQ03219 274 aaKnown RBP4.76□□□□□ -1.65
SPT3YDR392W BAG7Q12128 409 aa4.76□□□□□ -1.65
SPT3YDR392W RRP12Q12754 1228 aaKnown RBP4.76□□□□□ -1.65
SPT3YDR392W Q0297Q9ZZV8 51 aa4.76□□□□□ -1.65
SPT3YDR392W MPH2P0CD99 609 aa4.75□□□□□ -1.65
SPT3YDR392W GDA1P32621 518 aa4.75□□□□□ -1.65
SPT3YDR392W TDP1P38319 544 aa4.75□□□□□ -1.65
SPT3YDR392W CCT6P39079 546 aa4.75□□□□□ -1.65
SPT3YDR392W DHH1P39517 506 aaKnown RBP4.75□□□□□ -1.65
SPT3YDR392W PZF1P39933 429 aa4.75□□□□□ -1.65
SPT3YDR392W SPF1P39986 1215 aaKnown RBP4.75□□□□□ -1.65
SPT3YDR392W VFA1P40080 203 aa4.75□□□□□ -1.65
SPT3YDR392W YJL163CP46996 555 aa4.75□□□□□ -1.65
SPT3YDR392W COP1P53622 1201 aaKnown RBP4.75□□□□□ -1.65
SPT3YDR392W ZRG17P53735 605 aa4.75□□□□□ -1.65
SPT3YDR392W UTP14Q04500 899 aaKnown RBP4.75□□□□□ -1.65
SPT3YDR392W RNH1Q04740 348 aa4.75□□□□□ -1.65
SPT3YDR392W ARP9Q05123 467 aa4.75□□□□□ -1.65
SPT3YDR392W YLR012CQ07927 99 aa4.75□□□□□ -1.65
SPT3YDR392W HMG1P12683 1054 aa4.74□□□□□ -1.65
SPT3YDR392W PRP4P20053 465 aaKnown RBP4.74□□□□□ -1.65
SPT3YDR392W LRE1P25579 583 aaKnown RBP4.74□□□□□ -1.65
SPT3YDR392W PPZ2P33329 710 aa4.74□□□□□ -1.65
SPT3YDR392W YBR053CP38235 358 aa4.74□□□□□ -1.65
SPT3YDR392W PCL5P38794 229 aa4.74□□□□□ -1.65
SPT3YDR392W YJL206CP39529 758 aa4.74□□□□□ -1.65
SPT3YDR392W YER130CP39959 443 aa4.74□□□□□ -1.65
SPT3YDR392W YGL138CP53122 345 aa4.74□□□□□ -1.65
SPT3YDR392W TRM112P53738 135 aaPredicted RBP4.74□□□□□ -1.65
SPT3YDR392W NOG2P53742 486 aaKnown RBP4.74□□□□□ -1.65
SPT3YDR392W ARG7Q04728 441 aa4.74□□□□□ -1.65
SPT3YDR392W PSR2Q07949 397 aa4.74□□□□□ -1.65
SPT3YDR392W SFI1Q12369 946 aa4.74□□□□□ -1.65
SPT3YDR392W COX1P00401 534 aa4.73□□□□□ -1.65
SPT3YDR392W TUB1P09733 447 aaKnown RBP4.73□□□□□ -1.65
SPT3YDR392W MNE1P24720 663 aa4.73□□□□□ -1.65
SPT3YDR392W YBR184WP38299 523 aa4.73□□□□□ -1.65
SPT3YDR392W STL1P39932 569 aa4.73□□□□□ -1.65
SPT3YDR392W VAC8P39968 578 aa4.73□□□□□ -1.65
SPT3YDR392W KAP123P40069 1113 aaKnown RBP4.73□□□□□ -1.65
SPT3YDR392W YIL086CP40503 102 aa4.73□□□□□ -1.65
SPT3YDR392W GLG2P47011 380 aa4.73□□□□□ -1.65
SPT3YDR392W SMC3P47037 1230 aa4.73□□□□□ -1.65
SPT3YDR392W TAH11P47112 604 aa4.73□□□□□ -1.65
SPT3YDR392W ALG12P53730 551 aa4.73□□□□□ -1.65
SPT3YDR392W YSA1Q01976 231 aa4.73□□□□□ -1.65
SPT3YDR392W MZM1Q03429 123 aaPredicted RBP4.73□□□□□ -1.65
SPT3YDR392W YDR131CQ03899 556 aa4.73□□□□□ -1.65
SPT3YDR392W SPG3Q04398 127 aaPredicted RBP4.73□□□□□ -1.65
SPT3YDR392W COQ11Q05892 277 aa4.73□□□□□ -1.65
SPT3YDR392W TDA5Q06417 326 aaKnown RBP4.73□□□□□ -1.65
SPT3YDR392W YDL073WQ07454 984 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms