RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W ASA1Q06822 443 aa1.06□□□□□ -2.24
SCC2YDR180W RCL1Q08096 367 aaPredicted RBP1.06□□□□□ -2.24
SCC2YDR180W ACM1Q08981 209 aa1.06□□□□□ -2.24
SCC2YDR180W TRM8Q12009 286 aa1.06□□□□□ -2.24
SCC2YDR180W MSH5Q12175 901 aa1.06□□□□□ -2.24
SCC2YDR180W COX17Q12287 69 aa1.06□□□□□ -2.24
SCC2YDR180W NOP56Q12460 504 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
SCC2YDR180W AVL9Q12500 764 aa1.06□□□□□ -2.24
SCC2YDR180W SMC6Q12749 1114 aa1.06□□□□□ -2.24
SCC2YDR180W YBR182C-AQ8TGU6 64 aa1.06□□□□□ -2.24
SCC2YDR180W GPH1P06738 902 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W SES1P07284 462 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W FBP1P09201 348 aa1.05□□□□□ -2.24
SCC2YDR180W BIK1P11709 440 aa1.05□□□□□ -2.24
SCC2YDR180W RNA1P11745 407 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W PFK2P16862 959 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SCC2YDR180W RPB4P20433 221 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W DBP3P20447 523 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W DPB2P24482 689 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W ORC2P32833 620 aa1.05□□□□□ -2.24
SCC2YDR180W GSP1P32835 219 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W GSP2P32836 220 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W LST4P34239 828 aa1.05□□□□□ -2.24
SCC2YDR180W UBP11P36026 717 aa1.05□□□□□ -2.24
SCC2YDR180W UTP30P36144 274 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W SUL1P38359 859 aa1.05□□□□□ -2.24
SCC2YDR180W STB5P38699 743 aa1.05□□□□□ -2.24
SCC2YDR180W OSH7P38755 437 aa1.05□□□□□ -2.24
SCC2YDR180W BCD1P38772 366 aa1.05□□□□□ -2.24
SCC2YDR180W GIC1P38785 314 aa1.05□□□□□ -2.24
SCC2YDR180W UME6P39001 836 aa1.05□□□□□ -2.24
SCC2YDR180W PUG1P40100 303 aa1.05□□□□□ -2.24
SCC2YDR180W IMA5P40884 581 aa1.05□□□□□ -2.24
SCC2YDR180W THI6P41835 540 aa1.05□□□□□ -2.24
SCC2YDR180W JHD2P47156 728 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W NMA2P53204 395 aa1.05□□□□□ -2.24
SCC2YDR180W PEF1P53238 335 aa1.05□□□□□ -2.24
SCC2YDR180W HOL1P53389 586 aa1.05□□□□□ -2.24
SCC2YDR180W ASI2P53895 289 aa1.05□□□□□ -2.24
SCC2YDR180W CUZ1P53899 274 aa1.05□□□□□ -2.24
SCC2YDR180W YNL010WP53981 241 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W ORC3P54790 616 aa1.05□□□□□ -2.24
SCC2YDR180W ARP4P80428 489 aa1.05□□□□□ -2.24
SCC2YDR180W YPL071CQ02864 156 aa1.05□□□□□ -2.24
SCC2YDR180W MTG1Q03151 367 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W YMR210WQ03649 449 aa1.05□□□□□ -2.24
SCC2YDR180W YMR155WQ03795 547 aa1.05□□□□□ -2.24
SCC2YDR180W UFO1Q04511 668 aa1.05□□□□□ -2.24
SCC2YDR180W YDR286CQ05530 114 aa1.05□□□□□ -2.24
SCC2YDR180W YLR287CQ05881 355 aa1.05□□□□□ -2.24
SCC2YDR180W VPS38Q05919 439 aa1.05□□□□□ -2.24
SCC2YDR180W DXO1Q06349 442 aa1.05□□□□□ -2.24
SCC2YDR180W GAS5Q08193 484 aa1.05□□□□□ -2.24
SCC2YDR180W RSB1Q08417 382 aa1.05□□□□□ -2.24
SCC2YDR180W THI21Q08975 551 aa1.05□□□□□ -2.24
SCC2YDR180W YPL260WQ08977 551 aa1.05□□□□□ -2.24
SCC2YDR180W ATP16Q12165 160 aa1.05□□□□□ -2.24
SCC2YDR180W RIO1Q12196 484 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W OSW2Q12202 724 aa1.05□□□□□ -2.24
SCC2YDR180W TAF3Q12297 353 aa1.05□□□□□ -2.24
SCC2YDR180W COQ4O13525 335 aa1.05□□□□□ -2.24
SCC2YDR180W SPT3P06844 337 aa1.05□□□□□ -2.24
SCC2YDR180W SUI3P09064 285 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W RNR2P09938 399 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W GCD2P12754 651 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W SAC7P17121 654 aa1.05□□□□□ -2.24
SCC2YDR180W ISY1P21374 235 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W NAR1P23503 491 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W RIT1P23796 513 aa1.05□□□□□ -2.24
SCC2YDR180W CDC15P27636 974 aa1.05□□□□□ -2.24
SCC2YDR180W VPH2P32341 215 aa1.05□□□□□ -2.24
SCC2YDR180W YKL063CP35725 167 aa1.05□□□□□ -2.24
SCC2YDR180W TEF4P36008 412 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W PDX3P38075 228 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W TDP1P38319 544 aa1.05□□□□□ -2.24
SCC2YDR180W DIA4P38705 446 aaPredicted RBP1.05□□□□□ -2.24
SCC2YDR180W SNM1P40993 198 aa1.05□□□□□ -2.24
SCC2YDR180W RAD17P48581 401 aa1.05□□□□□ -2.24
SCC2YDR180W GCV2P49095 1034 aa1.05□□□□□ -2.24
SCC2YDR180W CTR1P49573 406 aa1.05□□□□□ -2.24
SCC2YDR180W FMS1P50264 508 aa1.05□□□□□ -2.24
SCC2YDR180W YAP1802P53309 568 aa1.05□□□□□ -2.24
SCC2YDR180W SPO1P53541 631 aa1.05□□□□□ -2.24
SCC2YDR180W NCE103P53615 221 aa1.05□□□□□ -2.24
SCC2YDR180W BRE5P53741 515 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W NOG2P53742 486 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W CNM67P53865 581 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W SLT2Q00772 484 aa1.05□□□□□ -2.24
SCC2YDR180W UBP2Q01476 1272 aa1.05□□□□□ -2.24
SCC2YDR180W MRPL13Q02204 264 aa1.05□□□□□ -2.24
SCC2YDR180W YDR239CQ03780 787 aa1.05□□□□□ -2.24
SCC2YDR180W RKM2Q03942 479 aa1.05□□□□□ -2.24
SCC2YDR180W SPC24Q04477 213 aa1.05□□□□□ -2.24
SCC2YDR180W SNO4Q04902 237 aa1.05□□□□□ -2.24
SCC2YDR180W RSC58Q07979 502 aa1.05□□□□□ -2.24
SCC2YDR180W HSP33Q08914 237 aaKnown RBP1.05□□□□□ -2.24
SCC2YDR180W HSP32Q08992 237 aa1.05□□□□□ -2.24
SCC2YDR180W HFI1Q12060 488 aa1.05□□□□□ -2.24
SCC2YDR180W ATG29Q12092 213 aa1.05□□□□□ -2.24
SCC2YDR180W YPR063CQ12160 140 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 213.8 ms