RNA–Protein interactions for RNA: YDR180W

SCC2, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC2, Length 4,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC2YDR180W FAP1P53971 965 aa2.45□□□□□ -2.02
SCC2YDR180W DRS1P32892 752 aaKnown RBP2.4□□□□□ -2.03
SCC2YDR180W PRY3P47033 881 aa2.27□□□□□ -2.05
SCC2YDR180W BFR2Q06631 534 aaKnown RBP2.16□□□□□ -2.06
SCC2YDR180W MTC1P47018 478 aaKnown RBP2.13□□□□□ -2.07
SCC2YDR180W TFA1P36100 482 aa2.1□□□□□ -2.07
SCC2YDR180W RQC2Q12532 1038 aaKnown RBP1.97□□□□□ -2.09
SCC2YDR180W DIP2Q12220 943 aaPredicted RBP1.95□□□□□ -2.1
SCC2YDR180W AVT3P36062 692 aa1.93□□□□□ -2.1
SCC2YDR180W DMA1P38823 416 aa1.88□□□□□ -2.11
SCC2YDR180W TAF7Q05021 590 aa1.86□□□□□ -2.11
SCC2YDR180W SPA2P23201 1466 aaKnown RBP1.84□□□□□ -2.12
SCC2YDR180W PTP3P40048 928 aa1.82□□□□□ -2.12
SCC2YDR180W MON2P48563 1636 aaPredicted RBP1.8□□□□□ -2.12
SCC2YDR180W NUP170P38181 1502 aa1.77□□□□□ -2.13
SCC2YDR180W RSE1Q04693 1361 aaKnown RBP1.76□□□□□ -2.13
SCC2YDR180W SKI3P17883 1432 aaKnown RBP1.75□□□□□ -2.13
SCC2YDR180W SSN2P38931 1420 aa1.75□□□□□ -2.13
SCC2YDR180W CHD1P32657 1468 aa1.74□□□□□ -2.13
SCC2YDR180W PEP1P32319 1579 aa1.73□□□□□ -2.13
SCC2YDR180W RPL17AP05740 184 aaKnown RBP1.73□□□□□ -2.13
SCC2YDR180W RPL17BP46990 184 aaKnown RBP1.73□□□□□ -2.13
SCC2YDR180W TY1B-DR4Q07793 1604 aa1.72□□□□□ -2.13
SCC2YDR180W SIS1P25294 352 aaKnown RBP1.72□□□□□ -2.13
SCC2YDR180W LEO1P38439 464 aa1.71□□□□□ -2.14
SCC2YDR180W YAH1Q12184 172 aaKnown RBP1.71□□□□□ -2.14
SCC2YDR180W MLP2P40457 1679 aa1.7□□□□□ -2.14
SCC2YDR180W TSR3Q12094 313 aaKnown RBP1.7□□□□□ -2.14
SCC2YDR180W ESC1Q03661 1658 aaKnown RBP1.7□□□□□ -2.14
SCC2YDR180W NSR1P27476 414 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
SCC2YDR180W RPG1P38249 964 aaKnown RBP1.69□□□□□ -2.14
SCC2YDR180W YCK3P39962 524 aa1.69□□□□□ -2.14
SCC2YDR180W HAA1Q12753 694 aaKnown RBP1.69□□□□□ -2.14
SCC2YDR180W UFD4P33202 1483 aa1.68□□□□□ -2.14
SCC2YDR180W SSP1P38871 571 aa1.68□□□□□ -2.14
SCC2YDR180W DMA2P53924 522 aa1.68□□□□□ -2.14
SCC2YDR180W REB1P21538 810 aa1.68□□□□□ -2.14
SCC2YDR180W ISW2Q08773 1120 aa1.68□□□□□ -2.14
SCC2YDR180W AAD16Q02895 342 aa1.67□□□□□ -2.14
SCC2YDR180W URN1Q06525 465 aaKnown RBP1.66□□□□□ -2.14
SCC2YDR180W TY1B-DR3Q99231 1755 aa1.66□□□□□ -2.14
SCC2YDR180W SGS1P35187 1447 aa1.65□□□□□ -2.14
SCC2YDR180W XRN1P22147 1528 aaKnown RBP1.65□□□□□ -2.15
SCC2YDR180W TCB3Q03640 1545 aaKnown RBP1.65□□□□□ -2.15
SCC2YDR180W MMS22Q06164 1454 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-LR1P0C2J3 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-FP0CX63 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-GR2P0CX64 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-CP25384 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-DR2Q03494 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY1B-DR1Q03855 1755 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-DR3Q07791 1770 aaKnown RBP1.63□□□□□ -2.15
SCC2YDR180W TY2B-OR1Q12113 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-DR1Q12472 1770 aa1.63□□□□□ -2.15
SCC2YDR180W TY2B-OR2Q12501 1770 aa1.63□□□□□ -2.15
SCC2YDR180W OXP1P28273 1286 aa1.63□□□□□ -2.15
SCC2YDR180W RIM101P33400 625 aa1.63□□□□□ -2.15
SCC2YDR180W SIN3P22579 1536 aa1.62□□□□□ -2.15
SCC2YDR180W YIL055CP40523 627 aaKnown RBP1.62□□□□□ -2.15
SCC2YDR180W PDR10P51533 1564 aa1.62□□□□□ -2.15
SCC2YDR180W IRC20Q06554 1556 aa1.62□□□□□ -2.15
SCC2YDR180W LEU3P08638 886 aa1.62□□□□□ -2.15
SCC2YDR180W YLR271WQ06152 274 aa1.62□□□□□ -2.15
SCC2YDR180W TY2B-BQ12491 1770 aa1.62□□□□□ -2.15
SCC2YDR180W ABP1P15891 592 aaKnown RBP1.62□□□□□ -2.15
SCC2YDR180W ARP8Q12386 881 aaKnown RBP RIP-Chip data1.62□□□□□ -2.15not detected
SCC2YDR180W TY3B-GQ99315 1547 aa1.62□□□□□ -2.15
SCC2YDR180W SPT21P35209 758 aa1.62□□□□□ -2.15
SCC2YDR180W ECM5Q03214 1411 aa1.61□□□□□ -2.15
SCC2YDR180W CST9Q06032 482 aa1.61□□□□□ -2.15
SCC2YDR180W SPB4P25808 606 aaPredicted RBP1.61□□□□□ -2.15
SCC2YDR180W SSK2P53599 1579 aa1.6□□□□□ -2.15
SCC2YDR180W INO80P53115 1489 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-HO13535 1793 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-DR5P0C2I2 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-DR6P0C2I3 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-LR2P0C2I5 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-LR3P0C2I6 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W TY1B-PR1P0C2I9 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W TY1B-PR2P0C2J0 1756 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-PR3P0C2J1 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W TY1B-JR1P47098 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-ML2Q03434 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W TY1B-ER1Q03612 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-ML1Q04711 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W TY1B-GR2Q12269 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-OLQ12273 1755 aa1.6□□□□□ -2.15
SCC2YDR180W TY1B-PLQ12414 1755 aaKnown RBP1.6□□□□□ -2.15
SCC2YDR180W YBT1P32386 1661 aa1.6□□□□□ -2.15
SCC2YDR180W SAS10Q12136 610 aaPredicted RBP1.6□□□□□ -2.15
SCC2YDR180W ULS1Q08562 1619 aa1.59□□□□□ -2.15
SCC2YDR180W TRM732Q03496 1420 aa1.59□□□□□ -2.15
SCC2YDR180W ESP1Q03018 1630 aa1.59□□□□□ -2.15
SCC2YDR180W STH1P32597 1359 aa1.59□□□□□ -2.16
SCC2YDR180W BUD31P25337 157 aaPredicted RBP1.58□□□□□ -2.16
SCC2YDR180W SNF2P22082 1703 aa1.58□□□□□ -2.16
SCC2YDR180W DCD1P06773 312 aa1.58□□□□□ -2.16
SCC2YDR180W MRPL32P25348 183 aa1.58□□□□□ -2.16
SCC2YDR180W RPN1P38764 993 aaKnown RBP1.58□□□□□ -2.16
SCC2YDR180W VPS70P47161 811 aa1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms