RNA–Protein interactions for RNA: YCR030C

SYP1, Transcript of Negative regulator of WASP-Arp23 complex, yeast

Gene SYP1, Length 2,613 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYP1	YCR030C	TAH11	P47112	604 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	TRF5	P48561	642 aa	Known RBP	4.81	□□□□□ -1.64
SYP1	YCR030C	VPS62	P53285	467 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	SLG1	P54867	378 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	YDR131C	Q03899	556 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	ICL2	Q12031	575 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	YDR524C-B	Q3E6R4	66 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	YLR149C	Q99296	730 aa		4.81	□□□□□ -1.64
SYP1	YCR030C	GID7	P25569	745 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	PRO1	P32264	428 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	HXT4	P32467	576 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YSC84	P32793	468 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YBR138C	P38277	524 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YBR225W	P38321	900 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	LIN1	P38852	340 aa	Predicted RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	SWD1	P39706	426 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	MAD2	P40958	196 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	TDA10	P42938	290 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YJL107C	P42947	387 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	RRT5	P43607	289 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YJR098C	P47139	656 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	DUS1	P53759	423 aa	Known RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	LEE1	Q02799	301 aa	Known RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	YLR345W	Q06137	509 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	TPO1	Q07824	586 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	ALG6	Q12001	544 aa	Known RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	QCR6	P00127	147 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	ILV2	P07342	687 aa	Known RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	ADE2	P21264	571 aa	Known RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	YCR051W	P25631	222 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	LOS1	P33418	1100 aa	Predicted RBP	4.8	□□□□□ -1.64
SYP1	YCR030C	MTH1	P35198	433 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	MMS21	P38632	267 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YAR028W	P39548	234 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	ECM1	P39715	212 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	DSE1	P40077	573 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	PRK1	P40494	810 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	YGR130C	P53278	816 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	SFB2	P53953	876 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	HAL9	Q12180	1030 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	HRT3	Q12347	344 aa		4.8	□□□□□ -1.64
SYP1	YCR030C	HIP1	P06775	603 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	YML002W	P0CF17	737 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	PUT4	P15380	627 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	OLE1	P21147	510 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	AFT1	P22149	690 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	YCL068C	P25593	260 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	YKR078W	P36158	585 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	ETR1	P38071	380 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	YBR053C	P38235	358 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	MSR1	P38714	643 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	SSZ1	P38788	538 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	YDR089W	P38966	869 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	SCS2	P40075	244 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	SCC4	P40090	624 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	ARG2	P40360	574 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	RLP7	P40693	322 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	YFL040W	P43562	540 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	ASN2	P49090	572 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	YGR045C	P53229	120 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	MTD1	Q02046	320 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	YPL071C	Q02864	156 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	NGL1	Q08213	363 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	DIN7	Q12086	430 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	KCS1	Q12494	1050 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	PRC1	P00729	532 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	MET16	P18408	261 aa	Predicted RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	KAR4	P25583	335 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	SSE1	P32589	693 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	SHE3	P38272	425 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	HSM3	P38348	480 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	OTU2	P38747	307 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	LYS9	P38999	446 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	PFK26	P40433	827 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	BNA2	P47125	453 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	GCV1	P48015	400 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	YMR209C	Q03648	457 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	GPM2	Q12008	311 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	NBP2	Q12163	236 aa		4.79	□□□□□ -1.64
SYP1	YCR030C	EFG1	Q3E705	233 aa	Known RBP	4.79	□□□□□ -1.64
SYP1	YCR030C	EST1	P17214	699 aa	Predicted RBP	4.78	□□□□□ -1.64
SYP1	YCR030C	VPS34	P22543	875 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	ADK2	P26364	225 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
SYP1	YCR030C	FUN30	P31380	1131 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	NGG1	P32494	702 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	BCK2	P33306	851 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	SLC1	P33333	303 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	YMC2	P38087	329 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	SPC97	P38863	823 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	VMA13	P41807	478 aa	Known RBP	4.78	□□□□□ -1.64
SYP1	YCR030C	YNL058C	P53947	316 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	MRPL13	Q02204	264 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	PNG1	Q02890	363 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	GCN5	Q03330	439 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	CSN9	Q03981	162 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	RSA3	Q05942	220 aa	Known RBP	4.78	□□□□□ -1.64
SYP1	YCR030C	APC9	Q12107	265 aa		4.78	□□□□□ -1.64
SYP1	YCR030C	CHS5	Q12114	671 aa	Known RBP	4.78	□□□□□ -1.64
SYP1	YCR030C	IZH4	Q99393	312 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28 ms