RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	SNO3	P43544	222 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	EPL1	P43572	832 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	GAT1	P43574	510 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	IMD3	P50095	523 aa	Known RBP	5.2	□□□□□ -1.58
PCL1	YNL289W	IDP3	P53982	420 aa	Known RBP	5.2	□□□□□ -1.58
PCL1	YNL289W	ERG13	P54839	491 aa	Known RBP	5.2	□□□□□ -1.58
PCL1	YNL289W	RPT6	Q01939	405 aa	Known RBP	5.2	□□□□□ -1.58
PCL1	YNL289W	YPL071C	Q02864	156 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	TPO3	Q06451	622 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	RAD34	Q06665	692 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	AIM6	Q07716	390 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	YOL114C	Q12322	202 aa		5.2	□□□□□ -1.58
PCL1	YNL289W	BI2	P03873	423 aa		5.19	□□□□□ -1.58
PCL1	YNL289W	KGD2	P19262	463 aa	Predicted RBP	5.19	□□□□□ -1.58
PCL1	YNL289W	KES1	P35844	434 aa	Known RBP	5.19	□□□□□ -1.58
PCL1	YNL289W	LNP1	P38878	278 aa		5.19	□□□□□ -1.58
PCL1	YNL289W	RAD26	P40352	1085 aa		5.19	□□□□□ -1.58
PCL1	YNL289W	SCS3	P53012	380 aa		5.19	□□□□□ -1.58
PCL1	YNL289W	YGL039W	P53183	348 aa	Known RBP	5.19	□□□□□ -1.58
PCL1	YNL289W	ESF2	P53743	316 aa	Known RBP	5.19	□□□□□ -1.58
PCL1	YNL289W	RGT2	Q12300	763 aa		5.19	□□□□□ -1.58
PCL1	YNL289W	MOT1	P32333	1867 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	YMR085W	P0CF18	432 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	SST2	P11972	698 aa	Known RBP	5.18	□□□□□ -1.58
PCL1	YNL289W	VMA2	P16140	517 aa	Known RBP	5.18	□□□□□ -1.58
PCL1	YNL289W	FTH1	P38310	465 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	VPS45	P38932	577 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	STT3	P39007	718 aa	Known RBP	5.18	□□□□□ -1.58
PCL1	YNL289W	CIR1	P42940	261 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	ICL2	Q12031	575 aa		5.18	□□□□□ -1.58
PCL1	YNL289W	SES1	P07284	462 aa	Known RBP	5.17	□□□□□ -1.58
PCL1	YNL289W	AFG3	P39925	761 aa		5.17	□□□□□ -1.58
PCL1	YNL289W	PSF2	P40359	213 aa		5.17	□□□□□ -1.58
PCL1	YNL289W	SOL4	P53315	255 aa		5.17	□□□□□ -1.58
PCL1	YNL289W	MDM1	Q01846	1127 aa		5.17	□□□□□ -1.58
PCL1	YNL289W	MET14	Q02196	202 aa		5.17	□□□□□ -1.58
PCL1	YNL289W	CET1	O13297	549 aa	Predicted RBP	5.16	□□□□□ -1.58
PCL1	YNL289W	PAH1	P32567	862 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	ERC1	P38767	581 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	ASE1	P50275	885 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	MOT3	P54785	490 aa	Known RBP	5.16	□□□□□ -1.58
PCL1	YNL289W	SLD5	Q03406	294 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	YMR321C	Q04898	105 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	SPH1	Q06160	661 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	GEP3	Q08622	556 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	DSE3	Q08729	430 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	LYS21	Q12122	440 aa	Known RBP	5.16	□□□□□ -1.58
PCL1	YNL289W	TY3A-G	Q12173	290 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	CRC1	Q12289	327 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	ERP3	Q12403	225 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	TY3A-I	Q99219	290 aa		5.16	□□□□□ -1.58
PCL1	YNL289W	TAO3	P40468	2376 aa		5.15	□□□□□ -1.58
PCL1	YNL289W	GAL1	P04385	528 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	MATALPHA2	P0CY08	210 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	HMLALPHA2	P0CY09	210 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	TPM1	P17536	199 aa	Known RBP	5.15	□□□□□ -1.59
PCL1	YNL289W	YAP1	P19880	650 aa	Known RBP	5.15	□□□□□ -1.59
PCL1	YNL289W	VPS1	P21576	704 aa	Known RBP	5.15	□□□□□ -1.59
PCL1	YNL289W	SIR1	P21691	654 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	SWI4	P25302	1093 aa	Known RBP	5.15	□□□□□ -1.59
PCL1	YNL289W	YUR1	P26725	428 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	CIN1	P40987	1014 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	QRI7	P43122	407 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	IRC7	P43623	340 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	CTF18	P49956	741 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	FMS1	P50264	508 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	TEP1	P53916	434 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	SEC5	P89102	971 aa		5.15	□□□□□ -1.59
PCL1	YNL289W	SNU56	Q03782	492 aa	Known RBP	5.15	□□□□□ -1.59
PCL1	YNL289W	MCR1	P36060	302 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	DBP7	P36120	742 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	VBA2	P38358	474 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	ERV46	P39727	415 aa		5.14	□□□□□ -1.59
PCL1	YNL289W	UBP7	P40453	1071 aa		5.14	□□□□□ -1.59
PCL1	YNL289W	SPO22	P40511	975 aa		5.14	□□□□□ -1.59
PCL1	YNL289W	ARP5	P53946	755 aa		5.14	□□□□□ -1.59
PCL1	YNL289W	EIS1	Q05050	843 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	YDR341C	Q05506	607 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	VIP1	Q06685	1146 aa	Known RBP	5.14	□□□□□ -1.59
PCL1	YNL289W	RNR2	P09938	399 aa	Known RBP	5.13	□□□□□ -1.59
PCL1	YNL289W	APM3	P38153	483 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	REG2	P38232	338 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	RXT2	P38255	430 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	PCI8	P40512	444 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	NPA3	P47122	385 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	VPS20	Q04272	221 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	AIM33	Q04516	312 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	SMD2	Q06217	110 aa	Known RBP	5.13	□□□□□ -1.59
PCL1	YNL289W	MLC2	Q06580	163 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	YBR255C-A	Q3E776	120 aa		5.13	□□□□□ -1.59
PCL1	YNL289W	MSS18	P08593	268 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	TKL1	P23254	680 aa	Known RBP	5.12	□□□□□ -1.59
PCL1	YNL289W	RGT1	P32862	1170 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	RPF2	P36160	344 aa	Known RBP	5.12	□□□□□ -1.59
PCL1	YNL289W	PES4	P39684	611 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	YIL024C	P40543	189 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	LIF1	P53150	421 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	LSB1	P53281	241 aa		5.12	□□□□□ -1.59
PCL1	YNL289W	COP1	P53622	1201 aa	Known RBP	5.12	□□□□□ -1.59
PCL1	YNL289W	YNL058C	P53947	316 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms