RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	MNN2	P38069	597 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	YIR016W	P40572	265 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	STU2	P46675	888 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	ASN1	P49089	572 aa	Known RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	YAT1	P80235	687 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	EFR3	Q03653	782 aa	Known RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	USA1	Q03714	838 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	MRPL1	Q04599	285 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	RIX7	Q07844	837 aa	Known RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	SLK19	Q08581	821 aa	Known RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	FMP40	Q08968	688 aa	Predicted RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	YPQ1	Q12010	308 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	RPI1	P23250	407 aa	Known RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	MGM1	P32266	881 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	YBL055C	P34220	418 aa	Predicted RBP	1.49	□□□□□ -2.17
YCS4	YLR272C	HEL1	P36113	551 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	YBR056W	P38081	501 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	PFF1	P38244	976 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	CTF18	P49956	741 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	COS12	P53053	380 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	YGR111W	P53265	400 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	YDL073W	Q07454	984 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	CDC45	Q08032	650 aa		1.49	□□□□□ -2.17
YCS4	YLR272C	VPS33	P20795	691 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	DMC1	P25453	334 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	RIM1	P32445	135 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	RPL32	P38061	130 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	MAD2	P40958	196 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	YJL163C	P46996	555 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	VPS25	P47142	202 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	BPL1	P48445	690 aa	Predicted RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	STB4	P50104	949 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	OCA2	P53949	197 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	PLM2	Q04383	521 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	RSF1	Q05043	376 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	DUS4	Q06063	367 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	MCP2	Q06567	569 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	MRPL35	Q06678	367 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	YDL176W	Q12027	708 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	HMI1	Q12039	706 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	HER1	Q12276	1246 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	YOL159C-A	Q3E769	90 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	EDE1	P34216	1381 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	MRP2	P10663	115 aa	Predicted RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	RAP1	P11938	827 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	PUT4	P15380	627 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	VPS1	P21576	704 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	PHO84	P25297	587 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	SLM5	P25345	492 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	OCA4	P25366	362 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	PGM1	P33401	570 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	SNG1	P46950	547 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	OCA1	P50946	238 aa	Predicted RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	RMD9	P53140	646 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	YGR126W	P53274	230 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	ATP23	P53722	227 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	ALF1	P53904	254 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	CIK1	Q01649	594 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	PRP42	Q03776	544 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	ROY1	Q04847	553 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	RLM1	Q12224	676 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	APC2	Q12440	853 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	ZPS1	Q12512	249 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	CDC21	P06785	304 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	GMH1	P36125	273 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	YMR262W	P38430	313 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	OTU2	P38747	307 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	VPS75	P53853	264 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	BNI5	P53890	448 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	RNT1	Q02555	471 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	PFA4	Q12006	378 aa		1.48	□□□□□ -2.17
YCS4	YLR272C	LEU9	Q12166	604 aa	Known RBP	1.48	□□□□□ -2.17
YCS4	YLR272C	YCR051W	P25631	222 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	FRD1	P32614	470 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	CCL1	P37366	393 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	RRP3	P38712	501 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	PCF11	P39081	626 aa	Predicted RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	HXT14	P42833	540 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	SAE2	P46946	345 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	CTK2	P46962	323 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	YGR149W	P48236	432 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	RIA1	P53893	1110 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	SNU56	Q03782	492 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	PDR8	Q06149	701 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	LUC7	Q07508	261 aa	Predicted RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	YDL218W	Q07629	317 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	CIR2	Q08822	631 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	YLR358C	O13565	187 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	MES1	P00958	751 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	TUF1	P02992	437 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	PDX1	P16451	410 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	1.47	□□□□□ -2.17	not detected
YCS4	YLR272C	BOS1	P25385	244 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	RPC53	P25441	422 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	DCG1	P32460	244 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	UGP1	P32861	499 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	TRS65	P32893	560 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	YNK1	P36010	153 aa	Known RBP	1.47	□□□□□ -2.17
YCS4	YLR272C	ROG1	P53118	685 aa		1.47	□□□□□ -2.17
YCS4	YLR272C	HST1	P53685	503 aa		1.47	□□□□□ -2.17

Retrieved 100 of 5,963 RNA–protein pairs in 87.7 ms