RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W ECM10P39987 644 aa7.99□□□□□ -1.13
ABP1YCR088W CCT7P42943 550 aaKnown RBP7.99□□□□□ -1.13
ABP1YCR088W MNN11P46985 422 aaKnown RBP7.99□□□□□ -1.13
ABP1YCR088W RRT6P53117 311 aaPredicted RBP7.99□□□□□ -1.13
ABP1YCR088W GET1P53192 235 aa7.99□□□□□ -1.13
ABP1YCR088W YNL058CP53947 316 aa7.99□□□□□ -1.13
ABP1YCR088W YNL011CP53980 444 aa7.99□□□□□ -1.13
ABP1YCR088W NHX1Q04121 633 aa7.99□□□□□ -1.13
ABP1YCR088W HDA3Q06623 655 aa7.99□□□□□ -1.13
ABP1YCR088W YPL247CQ12523 523 aa7.99□□□□□ -1.13
ABP1YCR088W HSH49Q99181 213 aaPredicted RBP7.99□□□□□ -1.13
ABP1YCR088W COR1P07256 457 aa7.98□□□□□ -1.13
ABP1YCR088W MSS51P32335 436 aa7.98□□□□□ -1.13
ABP1YCR088W YKR015CP36111 568 aa7.98□□□□□ -1.13
ABP1YCR088W TDP1P38319 544 aa7.98□□□□□ -1.13
ABP1YCR088W RIM11P38615 370 aa7.98□□□□□ -1.13
ABP1YCR088W ARN1P38731 627 aa7.98□□□□□ -1.13
ABP1YCR088W RPS10BP46784 105 aaKnown RBP7.98□□□□□ -1.13
ABP1YCR088W PEX31P53203 462 aa7.98□□□□□ -1.13
ABP1YCR088W YNL010WP53981 241 aaKnown RBP7.98□□□□□ -1.13
ABP1YCR088W CEG1Q01159 459 aaPredicted RBP7.98□□□□□ -1.13
ABP1YCR088W MSC2Q03455 724 aa7.98□□□□□ -1.13
ABP1YCR088W ECM38Q05902 660 aaPredicted RBP7.98□□□□□ -1.13
ABP1YCR088W PUS5Q06244 254 aa7.98□□□□□ -1.13
ABP1YCR088W CDA1Q06702 301 aa7.98□□□□□ -1.13
ABP1YCR088W RPS10AQ08745 105 aaPredicted RBP7.98□□□□□ -1.13
ABP1YCR088W ATP6P00854 259 aa7.97□□□□□ -1.13
ABP1YCR088W NDI1P32340 513 aa7.97□□□□□ -1.13
ABP1YCR088W NGG1P32494 702 aa7.97□□□□□ -1.13
ABP1YCR088W RGT1P32862 1170 aa7.97□□□□□ -1.13
ABP1YCR088W PEX6P33760 1030 aa7.97□□□□□ -1.13
ABP1YCR088W VRP1P37370 817 aa7.97□□□□□ -1.13
ABP1YCR088W FSH1P38777 243 aaKnown RBP7.97□□□□□ -1.13
ABP1YCR088W XDJ1P39102 459 aa7.97□□□□□ -1.13
ABP1YCR088W YEL028WP39989 153 aa7.97□□□□□ -1.13
ABP1YCR088W IAH1P41734 238 aa7.97□□□□□ -1.13
ABP1YCR088W YJL132WP47014 750 aa7.97□□□□□ -1.13
ABP1YCR088W NOP13P53883 403 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
ABP1YCR088W SFB2P53953 876 aa7.97□□□□□ -1.13
ABP1YCR088W TMA20P89886 181 aaPredicted RBP7.97□□□□□ -1.13
ABP1YCR088W MUK1Q02866 612 aa7.97□□□□□ -1.13
ABP1YCR088W JIP5Q06214 492 aaPredicted RBP7.97□□□□□ -1.13
ABP1YCR088W AAD4Q07747 329 aa7.97□□□□□ -1.13
ABP1YCR088W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
ABP1YCR088W TPK1P06244 397 aa7.97□□□□□ -1.13
ABP1YCR088W APE1P14904 514 aa7.97□□□□□ -1.13
ABP1YCR088W MET16P18408 261 aaPredicted RBP7.97□□□□□ -1.13
ABP1YCR088W TYE7P33122 291 aaPredicted RBP7.97□□□□□ -1.13
ABP1YCR088W YBL029WP38201 376 aa7.97□□□□□ -1.13
ABP1YCR088W APE4P38821 490 aa7.97□□□□□ -1.13
ABP1YCR088W YHR131CP38835 850 aa7.97□□□□□ -1.13
ABP1YCR088W LSM3P57743 89 aaKnown RBP7.97□□□□□ -1.13
ABP1YCR088W RAD30Q04049 632 aa7.97□□□□□ -1.13
ABP1YCR088W SEC10Q06245 871 aa7.97□□□□□ -1.13
ABP1YCR088W REH1Q06709 432 aa7.97□□□□□ -1.13
ABP1YCR088W SYT1Q06836 1226 aa7.97□□□□□ -1.13
ABP1YCR088W YOR238WQ08634 303 aa7.97□□□□□ -1.13
ABP1YCR088W SPE3Q12074 293 aaKnown RBP7.97□□□□□ -1.13
ABP1YCR088W PSY3Q12318 242 aa7.97□□□□□ -1.13
ABP1YCR088W CMR1Q12510 522 aaKnown RBP7.97□□□□□ -1.13
ABP1YCR088W COX5AP00424 153 aa7.96□□□□□ -1.14
ABP1YCR088W ABF1P14164 731 aa7.96□□□□□ -1.14
ABP1YCR088W BEM1P29366 551 aa7.96□□□□□ -1.14
ABP1YCR088W PTP2P29461 750 aa7.96□□□□□ -1.14
ABP1YCR088W KAR9P32526 644 aa7.96□□□□□ -1.14
ABP1YCR088W ATO2P32907 282 aa7.96□□□□□ -1.14
ABP1YCR088W GRS1P38088 690 aaKnown RBP7.96□□□□□ -1.14
ABP1YCR088W YBR259WP38338 688 aa7.96□□□□□ -1.14
ABP1YCR088W STS1P38637 319 aa7.96□□□□□ -1.14
ABP1YCR088W CDC1P40986 491 aa7.96□□□□□ -1.14
ABP1YCR088W CNN1P43618 361 aa7.96□□□□□ -1.14
ABP1YCR088W TIM13P53299 105 aa7.96□□□□□ -1.14
ABP1YCR088W ARC35P53731 342 aaKnown RBP7.96□□□□□ -1.14
ABP1YCR088W HPT1Q04178 221 aaKnown RBP7.96□□□□□ -1.14
ABP1YCR088W TRP3P00937 484 aa7.95□□□□□ -1.14
ABP1YCR088W MSS116P15424 664 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W DBP1P24784 617 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W SPB1P25582 841 aaPredicted RBP7.95□□□□□ -1.14
ABP1YCR088W RAD16P31244 790 aa7.95□□□□□ -1.14
ABP1YCR088W UBX7P38349 436 aa7.95□□□□□ -1.14
ABP1YCR088W YBR285WP38354 144 aa7.95□□□□□ -1.14
ABP1YCR088W UTP9P38882 575 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W PRM9P39551 298 aa7.95□□□□□ -1.14
ABP1YCR088W SEO1P39709 593 aa7.95□□□□□ -1.14
ABP1YCR088W YIR007WP40566 764 aa7.95□□□□□ -1.14
ABP1YCR088W YJR154WP47181 346 aa7.95□□□□□ -1.14
ABP1YCR088W ISM1P48526 1002 aa7.95□□□□□ -1.14
ABP1YCR088W RBL2P48606 106 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W GPI1P53306 609 aa7.95□□□□□ -1.14
ABP1YCR088W JIP4Q03361 876 aa7.95□□□□□ -1.14
ABP1YCR088W TIF35Q04067 274 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W HSP31Q04432 237 aa7.95□□□□□ -1.14
ABP1YCR088W CRN1Q06440 651 aa7.95□□□□□ -1.14
ABP1YCR088W SWC7Q06707 132 aa7.95□□□□□ -1.14
ABP1YCR088W YOL159CQ08300 171 aa7.95□□□□□ -1.14
ABP1YCR088W SLF1Q12034 447 aaKnown RBP7.95□□□□□ -1.14
ABP1YCR088W MSH5Q12175 901 aa7.95□□□□□ -1.14
ABP1YCR088W YOR022CQ12204 715 aa7.95□□□□□ -1.14
ABP1YCR088W UBX3Q12229 455 aa7.95□□□□□ -1.14
ABP1YCR088W NHA1Q99271 985 aa7.95□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms