RNA–Protein interactions for RNA: ENSMUST00000053729.13

Pdss1-201, Transcript of Decaprenyl-diphosphate synthase subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdss1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdss1-201ENSMUST00000053729 Gm5767A0A0J9YTU8 78 aa13,53□□□□□ -0,24
Pdss1-201ENSMUST00000053729 C130032M10RikQ8C888 123 aa13,51□□□□□ -0,25
Pdss1-201ENSMUST00000053729 Cypt15B1AXS0 87 aa13,5□□□□□ -0,25
Pdss1-201ENSMUST00000053729 Prm1P02319 51 aa13,43□□□□□ -0,26
Pdss1-201ENSMUST00000053729 Ubl5Q9EPV8 73 aa13,41□□□□□ -0,26
Pdss1-201ENSMUST00000053729 Gm11939A2A592 99 aa13,39□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Defa21Q8C1P2 93 aa13,38□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Gm26620Q9CY65 116 aa13,37□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Gm45213A0A0U1RNZ6 101 aa13,36□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Reg3aO09037 175 aa13,36□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Cdip1Q9DB75 208 aa13,34□□□□□ -0,27
Pdss1-201ENSMUST00000053729 Gm9821Q8K076 103 aa13,31□□□□□ -0,28
Pdss1-201ENSMUST00000053729 MplkipQ9D011 178 aa13,31□□□□□ -0,28
Pdss1-201ENSMUST00000053729 Lyrm7Q9DA03 104 aa13,3□□□□□ -0,28
Pdss1-201ENSMUST00000053729 Gm7735D3YX18 52 aa13,29□□□□□ -0,28
Pdss1-201ENSMUST00000053729 Gtf2h5Q8K2X8 71 aa13,28□□□□□ -0,28
Pdss1-201ENSMUST00000053729 Gm9789Q8BIG3 52 aa13,27□□□□□ -0,29
Pdss1-201ENSMUST00000053729 Pxt1Q8K459 51 aa13,26□□□□□ -0,29
Pdss1-201ENSMUST00000053729 Igkv3-3A0A140T8Q0 119 aa13,25□□□□□ -0,29
Pdss1-201ENSMUST00000053729 Ush2AQ2QI47 5193 aa13,23□□□□□ -0,29
Pdss1-201ENSMUST00000053729 BikO70337 150 aa13,22□□□□□ -0,29
Pdss1-201ENSMUST00000053729 Igkv8-19A0A0G2JFN8 121 aa13,19□□□□□ -0,3
Pdss1-201ENSMUST00000053729 Trav3-1Q5R1I8 114 aa13,18□□□□□ -0,3
Pdss1-201ENSMUST00000053729 Krtap15-1Q9QZU5 150 aa13,13□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Fam240bJ3QMB3 78 aa13,12□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Tmem254aP0DN89 123 aa13,12□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Tmem254bP0DN90 123 aa13,12□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Tmem254cP0DN91 123 aa13,12□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Scgb1b2O35176 93 aa13,1□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Defb13Q8R2I4 64 aa13,1□□□□□ -0,31
Pdss1-201ENSMUST00000053729 Sec61bQ9CQS8 96 aaKnown RBP13,03□□□□□ -0,32
Pdss1-201ENSMUST00000053729 Rpl37Q9D823 97 aa13,03□□□□□ -0,32
Pdss1-201ENSMUST00000053729 Hmcn2A2AJ76 5100 aa13,02□□□□□ -0,33
Pdss1-201ENSMUST00000053729 Gm10267M0QWD8 85 aa12,99□□□□□ -0,33
Pdss1-201ENSMUST00000053729 Prr15lQ8JZM2 100 aa12,97□□□□□ -0,33
Pdss1-201ENSMUST00000053729 Ubr4A2AN08 5180 aa12,91□□□□□ -0,34
Pdss1-201ENSMUST00000053729 Hist1h4aP62806 103 aaKnown RBP12,9□□□□□ -0,34
Pdss1-201ENSMUST00000053729 4932415D10RikA0A1W2P6U8 4986 aa12,89□□□□□ -0,35
Pdss1-201ENSMUST00000053729 A0A286YE49 62 aa12,88□□□□□ -0,35
Pdss1-201ENSMUST00000053729 Pcp4P63054 62 aa12,85□□□□□ -0,35
Pdss1-201ENSMUST00000053729 Samd13D3YUG0 102 aa12,84□□□□□ -0,35
Pdss1-201ENSMUST00000053729 7530416G11RikJ3QJX6 159 aa12,83□□□□□ -0,36
Pdss1-201ENSMUST00000053729 2310057N15RikQ9D6T8 200 aa12,82□□□□□ -0,36
Pdss1-201ENSMUST00000053729 Apoc4Q61268 124 aa12,78□□□□□ -0,36
Pdss1-201ENSMUST00000053729 Rnase13Q5GAM7 153 aa12,74□□□□□ -0,37
Pdss1-201ENSMUST00000053729 Naa38Q9D2U5 125 aa12,74□□□□□ -0,37
Pdss1-201ENSMUST00000053729 Krtap3-2Q9D638 99 aa12,73□□□□□ -0,37
Pdss1-201ENSMUST00000053729 Krtap3-3Q9D7P0 99 aa12,73□□□□□ -0,37
Pdss1-201ENSMUST00000053729 Spink8Q09TK9 105 aa12,72□□□□□ -0,37
Pdss1-201ENSMUST00000053729 2310034C09RikQ9D746 214 aa12,72□□□□□ -0,37
Pdss1-201ENSMUST00000053729 Ndufc1Q9CQY9 76 aa12,63□□□□□ -0,39
Pdss1-201ENSMUST00000053729 BatfO35284 125 aa12,61□□□□□ -0,39
Pdss1-201ENSMUST00000053729 Krtap1-3A2A588 173 aa12,6□□□□□ -0,39
Pdss1-201ENSMUST00000053729 1700074P13RikQ9D9G7 251 aa12,57□□□□□ -0,4
Pdss1-201ENSMUST00000053729 Fam229bQ8CF36 80 aa12,56□□□□□ -0,4
Pdss1-201ENSMUST00000053729 Gm4491E0CX42 125 aa12,54□□□□□ -0,4
Pdss1-201ENSMUST00000053729 Gm28539A0A087WSL9 92 aa12,53□□□□□ -0,4
Pdss1-201ENSMUST00000053729 SvipQ3UZP4 77 aa12,52□□□□□ -0,4
Pdss1-201ENSMUST00000053729 Atp5eP56382 52 aa12,49□□□□□ -0,41
Pdss1-201ENSMUST00000053729 Gm17416Q30KP4 66 aa12,48□□□□□ -0,41
Pdss1-201ENSMUST00000053729 Crct1Q6PAI5 102 aa12,44□□□□□ -0,42
Pdss1-201ENSMUST00000053729 Anapc13Q8R034 74 aa12,41□□□□□ -0,42
Pdss1-201ENSMUST00000053729 9230102O04RikA2ASX7 82 aa12,37□□□□□ -0,43
Pdss1-201ENSMUST00000053729 Fam229aB2KGE5 128 aa12,37□□□□□ -0,43
Pdss1-201ENSMUST00000053729 ZanO88799 5376 aa12,36□□□□□ -0,43
Pdss1-201ENSMUST00000053729 Krtap16-3Q8C1I6 86 aa12,35□□□□□ -0,43
Pdss1-201ENSMUST00000053729 Q8BGJ3 129 aa12,33□□□□□ -0,43
Pdss1-201ENSMUST00000053729 Gm10999F6Q4M4 69 aa12,31□□□□□ -0,44
Pdss1-201ENSMUST00000053729 Krtap19-1Q925H2 87 aa12,3□□□□□ -0,44
Pdss1-201ENSMUST00000053729 Krtap19-3Q925H6 87 aa12,28□□□□□ -0,44
Pdss1-201ENSMUST00000053729 4930518I15RikQ3V2W7 57 aa12,26□□□□□ -0,45
Pdss1-201ENSMUST00000053729 LorP18165 486 aa12,23□□□□□ -0,45
Pdss1-201ENSMUST00000053729 Atox1O08997 68 aaKnown RBP12,22□□□□□ -0,45
Pdss1-201ENSMUST00000053729 Fat4Q2PZL6 4981 aa12,22□□□□□ -0,45
Pdss1-201ENSMUST00000053729 1700042G07RikB1AUF7 90 aa12,19□□□□□ -0,46
Pdss1-201ENSMUST00000053729 Chtf8P0CG14 533 aa12,17□□□□□ -0,46
Pdss1-201ENSMUST00000053729 4930507D05RikQ8C9C9 103 aa12,17□□□□□ -0,46
Pdss1-201ENSMUST00000053729 Defb38Q7TNV7 63 aa12,16□□□□□ -0,46
Pdss1-201ENSMUST00000053729 Serp2Q6TAW2 65 aa12,15□□□□□ -0,47
Pdss1-201ENSMUST00000053729 Prr13Q9CQJ5 137 aa12,12□□□□□ -0,47
Pdss1-201ENSMUST00000053729 Rnf213E9Q555 5152 aaKnown RBP12,09□□□□□ -0,47
Pdss1-201ENSMUST00000053729 Gm19402J3QJV4 266 aa12,09□□□□□ -0,47
Pdss1-201ENSMUST00000053729 Coa6Q8BGD8 79 aa12,08□□□□□ -0,48
Pdss1-201ENSMUST00000053729 Gm10160F6Y577 67 aa12,06□□□□□ -0,48
Pdss1-201ENSMUST00000053729 Gm21798J3QNU5 87 aa12,05□□□□□ -0,48
Pdss1-201ENSMUST00000053729 B230307C23RikQ8BLB2 64 aa12,05□□□□□ -0,48
Pdss1-201ENSMUST00000053729 Gm10318A0A1W2P728 225 aa12,04□□□□□ -0,48
Pdss1-201ENSMUST00000053729 Krtap1-4Q3V2D6 188 aa12,04□□□□□ -0,48
Pdss1-201ENSMUST00000053729 Spint4Q9D263 159 aa12,04□□□□□ -0,48
Pdss1-201ENSMUST00000053729 2310079G19RikQ9D6L6 185 aa12,04□□□□□ -0,48
Pdss1-201ENSMUST00000053729 2210017I01RikA0A0A6YVV1 95 aa12□□□□□ -0,49
Pdss1-201ENSMUST00000053729 Krtap13-1Q8K198 168 aa11,97□□□□□ -0,49
Pdss1-201ENSMUST00000053729 SmcpP15265 143 aa11,96□□□□□ -0,5
Pdss1-201ENSMUST00000053729 Gm10643Q3URG9 111 aa11,95□□□□□ -0,5
Pdss1-201ENSMUST00000053729 Smim20D3Z7Q2 69 aa11,89□□□□□ -0,51
Pdss1-201ENSMUST00000053729 Krtap1-5A2A590 122 aa11,83□□□□□ -0,52
Pdss1-201ENSMUST00000053729 Gm10061D3Z714 54 aa11,78□□□□□ -0,52
Pdss1-201ENSMUST00000053729 Rps28P62858 69 aaKnown RBP11,71□□□□□ -0,54
Pdss1-201ENSMUST00000053729 Coa5Q99M07 74 aa11,68□□□□□ -0,54
Pdss1-201ENSMUST00000053729 SptssbQ925E8 76 aa11,64□□□□□ -0,55
Retrieved 100 of 22,080 RNA–protein pairs in 36,7 ms