Protein–RNA interactions for Protein: A0A0G2JFN8

Igkv8-19, Immunoglobulin kappa variable 8-19 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-19A0A0G2JFN8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Igkv8-19A0A0G2JFN8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Igkv8-19A0A0G2JFN8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Igkv8-19A0A0G2JFN8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Igkv8-19A0A0G2JFN8 Psd-208ENSMUST00000224556 2034 ntBASIC19.46■□□□□ 0.71
Igkv8-19A0A0G2JFN8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Igkv8-19A0A0G2JFN8 Gm25239-201ENSMUST00000174915 86 ntBASIC19.37■□□□□ 0.69
Igkv8-19A0A0G2JFN8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Igkv8-19A0A0G2JFN8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Igkv8-19A0A0G2JFN8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv8-19A0A0G2JFN8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv8-19A0A0G2JFN8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igkv8-19A0A0G2JFN8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv8-19A0A0G2JFN8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igkv8-19A0A0G2JFN8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Igkv8-19A0A0G2JFN8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Igkv8-19A0A0G2JFN8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Igkv8-19A0A0G2JFN8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv8-19A0A0G2JFN8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Igkv8-19A0A0G2JFN8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Igkv8-19A0A0G2JFN8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv8-19A0A0G2JFN8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv8-19A0A0G2JFN8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv8-19A0A0G2JFN8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv8-19A0A0G2JFN8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv8-19A0A0G2JFN8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv8-19A0A0G2JFN8 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.71■□□□□ 0.43
Igkv8-19A0A0G2JFN8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC17.7■□□□□ 0.42
Igkv8-19A0A0G2JFN8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv8-19A0A0G2JFN8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Igkv8-19A0A0G2JFN8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv8-19A0A0G2JFN8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv8-19A0A0G2JFN8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Igkv8-19A0A0G2JFN8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.63■□□□□ 0.41
Igkv8-19A0A0G2JFN8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.6■□□□□ 0.41
Igkv8-19A0A0G2JFN8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Igkv8-19A0A0G2JFN8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Igkv8-19A0A0G2JFN8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Igkv8-19A0A0G2JFN8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Igkv8-19A0A0G2JFN8 Gm15042-201ENSMUST00000120212 883 ntBASIC17.38■□□□□ 0.37
Igkv8-19A0A0G2JFN8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Igkv8-19A0A0G2JFN8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Igkv8-19A0A0G2JFN8 Gm10524-201ENSMUST00000181931 1893 ntBASIC17.3■□□□□ 0.36
Igkv8-19A0A0G2JFN8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Igkv8-19A0A0G2JFN8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Igkv8-19A0A0G2JFN8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Igkv8-19A0A0G2JFN8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Igkv8-19A0A0G2JFN8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Igkv8-19A0A0G2JFN8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.13■□□□□ 0.33
Igkv8-19A0A0G2JFN8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Igkv8-19A0A0G2JFN8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Igkv8-19A0A0G2JFN8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Igkv8-19A0A0G2JFN8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Igkv8-19A0A0G2JFN8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC17.03■□□□□ 0.32
Igkv8-19A0A0G2JFN8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Igkv8-19A0A0G2JFN8 Gm15045-201ENSMUST00000117359 883 ntBASIC16.94■□□□□ 0.3
Igkv8-19A0A0G2JFN8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv8-19A0A0G2JFN8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC16.86■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-19A0A0G2JFN8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv8-19A0A0G2JFN8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Igkv8-19A0A0G2JFN8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv8-19A0A0G2JFN8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Igkv8-19A0A0G2JFN8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.74■□□□□ 0.27
Igkv8-19A0A0G2JFN8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv8-19A0A0G2JFN8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.71■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.65■□□□□ 0.26
Igkv8-19A0A0G2JFN8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Igkv8-19A0A0G2JFN8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC16.59■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv8-19A0A0G2JFN8 Gm24109-201ENSMUST00000175489 103 ntBASIC16.56■□□□□ 0.24
Igkv8-19A0A0G2JFN8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv8-19A0A0G2JFN8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Igkv8-19A0A0G2JFN8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv8-19A0A0G2JFN8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv8-19A0A0G2JFN8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv8-19A0A0G2JFN8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC16.49■□□□□ 0.23
Igkv8-19A0A0G2JFN8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Igkv8-19A0A0G2JFN8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv8-19A0A0G2JFN8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Igkv8-19A0A0G2JFN8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv8-19A0A0G2JFN8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 778.9 ms