Protein–RNA interactions for Protein: A0A0A6YVV1

2210017I01Rik, RIKEN cDNA 2210017I01 gene, mousemouse

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
2210017I01RikA0A0A6YVV1 Gm25239-201ENSMUST00000174915 86 ntBASIC18.04■□□□□ 0.48
2210017I01RikA0A0A6YVV1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
2210017I01RikA0A0A6YVV1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
2210017I01RikA0A0A6YVV1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
2210017I01RikA0A0A6YVV1 Gm44487-201ENSMUST00000205145 325 ntBASIC16.55■□□□□ 0.24
2210017I01RikA0A0A6YVV1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
2210017I01RikA0A0A6YVV1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
2210017I01RikA0A0A6YVV1 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
2210017I01RikA0A0A6YVV1 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC16.28■□□□□ 0.2
2210017I01RikA0A0A6YVV1 Gm15042-201ENSMUST00000120212 883 ntBASIC16.09■□□□□ 0.17
2210017I01RikA0A0A6YVV1 Gm37444-201ENSMUST00000193605 439 ntBASIC16.06■□□□□ 0.16
2210017I01RikA0A0A6YVV1 Gm42790-201ENSMUST00000201268 969 ntBASIC15.9■□□□□ 0.14
2210017I01RikA0A0A6YVV1 Psd-208ENSMUST00000224556 2034 ntBASIC15.9■□□□□ 0.14
2210017I01RikA0A0A6YVV1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
2210017I01RikA0A0A6YVV1 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC15.79■□□□□ 0.12
2210017I01RikA0A0A6YVV1 Gm15045-201ENSMUST00000117359 883 ntBASIC15.78■□□□□ 0.12
2210017I01RikA0A0A6YVV1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
2210017I01RikA0A0A6YVV1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
2210017I01RikA0A0A6YVV1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
2210017I01RikA0A0A6YVV1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC15.58■□□□□ 0.08
2210017I01RikA0A0A6YVV1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC15.57■□□□□ 0.08
2210017I01RikA0A0A6YVV1 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC15.55■□□□□ 0.08
2210017I01RikA0A0A6YVV1 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
2210017I01RikA0A0A6YVV1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
2210017I01RikA0A0A6YVV1 Gm24109-201ENSMUST00000175489 103 ntBASIC15.48■□□□□ 0.07
2210017I01RikA0A0A6YVV1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
2210017I01RikA0A0A6YVV1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.4■□□□□ 0.06
2210017I01RikA0A0A6YVV1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
2210017I01RikA0A0A6YVV1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
2210017I01RikA0A0A6YVV1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
2210017I01RikA0A0A6YVV1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
2210017I01RikA0A0A6YVV1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
2210017I01RikA0A0A6YVV1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
2210017I01RikA0A0A6YVV1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
2210017I01RikA0A0A6YVV1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC15.18■□□□□ 0.02
2210017I01RikA0A0A6YVV1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
2210017I01RikA0A0A6YVV1 Gm23366-201ENSMUST00000175022 89 ntBASIC15.14■□□□□ 0.01
2210017I01RikA0A0A6YVV1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
2210017I01RikA0A0A6YVV1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
2210017I01RikA0A0A6YVV1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
2210017I01RikA0A0A6YVV1 Gm15823-201ENSMUST00000064305 670 ntBASIC15.08■□□□□ 0
2210017I01RikA0A0A6YVV1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC15.07■□□□□ 0
2210017I01RikA0A0A6YVV1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC15.03■□□□□ -0
2210017I01RikA0A0A6YVV1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
2210017I01RikA0A0A6YVV1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
2210017I01RikA0A0A6YVV1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
2210017I01RikA0A0A6YVV1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
2210017I01RikA0A0A6YVV1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
2210017I01RikA0A0A6YVV1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
2210017I01RikA0A0A6YVV1 Gm19891-201ENSMUST00000189771 303 ntBASIC14.86□□□□□ -0.03
2210017I01RikA0A0A6YVV1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
2210017I01RikA0A0A6YVV1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC14.8□□□□□ -0.04
2210017I01RikA0A0A6YVV1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
2210017I01RikA0A0A6YVV1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
2210017I01RikA0A0A6YVV1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC14.76□□□□□ -0.05
2210017I01RikA0A0A6YVV1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
2210017I01RikA0A0A6YVV1 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC14.67□□□□□ -0.06
2210017I01RikA0A0A6YVV1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC14.65□□□□□ -0.06
2210017I01RikA0A0A6YVV1 Gm10524-201ENSMUST00000181931 1893 ntBASIC14.65□□□□□ -0.06
2210017I01RikA0A0A6YVV1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
2210017I01RikA0A0A6YVV1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
2210017I01RikA0A0A6YVV1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC14.64□□□□□ -0.07
2210017I01RikA0A0A6YVV1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
2210017I01RikA0A0A6YVV1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
2210017I01RikA0A0A6YVV1 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
2210017I01RikA0A0A6YVV1 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.56□□□□□ -0.08
2210017I01RikA0A0A6YVV1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
2210017I01RikA0A0A6YVV1 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
2210017I01RikA0A0A6YVV1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
2210017I01RikA0A0A6YVV1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
2210017I01RikA0A0A6YVV1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
2210017I01RikA0A0A6YVV1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
2210017I01RikA0A0A6YVV1 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.39□□□□□ -0.11
2210017I01RikA0A0A6YVV1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
2210017I01RikA0A0A6YVV1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
2210017I01RikA0A0A6YVV1 Gm25007-201ENSMUST00000083808 133 ntBASIC14.33□□□□□ -0.12
2210017I01RikA0A0A6YVV1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
2210017I01RikA0A0A6YVV1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC14.31□□□□□ -0.12
2210017I01RikA0A0A6YVV1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
2210017I01RikA0A0A6YVV1 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.28□□□□□ -0.12
2210017I01RikA0A0A6YVV1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Gm43371-201ENSMUST00000202838 1031 ntBASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Trmt13-210ENSMUST00000198454 880 ntBASIC14.23□□□□□ -0.13
2210017I01RikA0A0A6YVV1 Gm42596-201ENSMUST00000196305 1958 ntBASIC14.22□□□□□ -0.13
2210017I01RikA0A0A6YVV1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
2210017I01RikA0A0A6YVV1 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.2□□□□□ -0.14
2210017I01RikA0A0A6YVV1 Gm27325-201ENSMUST00000175467 74 ntBASIC14.18□□□□□ -0.14
2210017I01RikA0A0A6YVV1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
2210017I01RikA0A0A6YVV1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC14.18□□□□□ -0.14
2210017I01RikA0A0A6YVV1 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.14□□□□□ -0.15
2210017I01RikA0A0A6YVV1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC14.13□□□□□ -0.15
2210017I01RikA0A0A6YVV1 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
2210017I01RikA0A0A6YVV1 Gm25238-201ENSMUST00000174914 89 ntBASIC14.12□□□□□ -0.15
2210017I01RikA0A0A6YVV1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms