Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Gm25239-201ENSMUST00000174915 86 ntBASIC20,57■□□□□ 0,88
Rnf213E9Q555 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC19,02■□□□□ 0,64
Rnf213E9Q555 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18,69■□□□□ 0,58
Rnf213E9Q555 Gm24109-201ENSMUST00000175489 103 ntBASIC18,06■□□□□ 0,48
Rnf213E9Q555 Gm15042-201ENSMUST00000120212 883 ntBASIC17,51■□□□□ 0,39
Rnf213E9Q555 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17,38■□□□□ 0,37
Rnf213E9Q555 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC17,36■□□□□ 0,37
Rnf213E9Q555 Gm15045-201ENSMUST00000117359 883 ntBASIC17,09■□□□□ 0,33
Rnf213E9Q555 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC17,01■□□□□ 0,31
Rnf213E9Q555 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16,98■□□□□ 0,31
Rnf213E9Q555 Gm23366-201ENSMUST00000175022 89 ntBASIC16,96■□□□□ 0,3
Rnf213E9Q555 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16,87■□□□□ 0,29
Rnf213E9Q555 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16,83■□□□□ 0,29
Rnf213E9Q555 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16,81■□□□□ 0,28
Rnf213E9Q555 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16,72■□□□□ 0,27
Rnf213E9Q555 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16,71■□□□□ 0,27
Rnf213E9Q555 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC16,43■□□□□ 0,22
Rnf213E9Q555 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16,35■□□□□ 0,21
Rnf213E9Q555 Gm25238-201ENSMUST00000174914 89 ntBASIC16,3■□□□□ 0,2
Rnf213E9Q555 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16,3■□□□□ 0,2
Rnf213E9Q555 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16,19■□□□□ 0,18
Rnf213E9Q555 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16,18■□□□□ 0,18
Rnf213E9Q555 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC16,05■□□□□ 0,16
Rnf213E9Q555 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15,93■□□□□ 0,14
Rnf213E9Q555 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15,89■□□□□ 0,13
Rnf213E9Q555 Gm25262-201ENSMUST00000174934 133 ntBASIC15,83■□□□□ 0,12
Rnf213E9Q555 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15,68■□□□□ 0,1
Rnf213E9Q555 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC15,68■□□□□ 0,1
Rnf213E9Q555 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC15,66■□□□□ 0,1
Rnf213E9Q555 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15,61■□□□□ 0,09
Rnf213E9Q555 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC15,59■□□□□ 0,09
Rnf213E9Q555 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15,55■□□□□ 0,08
Rnf213E9Q555 Gm26115-201ENSMUST00000175605 87 ntBASIC15,54■□□□□ 0,08
Rnf213E9Q555 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC15,54■□□□□ 0,08
Rnf213E9Q555 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15,47■□□□□ 0,07
Rnf213E9Q555 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC15,45■□□□□ 0,06
Rnf213E9Q555 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC15,44■□□□□ 0,06
Rnf213E9Q555 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC15,42■□□□□ 0,06
Rnf213E9Q555 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC15,35■□□□□ 0,05
Rnf213E9Q555 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC15,34■□□□□ 0,05
Rnf213E9Q555 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC15,31■□□□□ 0,04
Rnf213E9Q555 Gm8109-201ENSMUST00000194076 746 ntBASIC15,3■□□□□ 0,04
Rnf213E9Q555 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC15,28■□□□□ 0,04
Rnf213E9Q555 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC15,28■□□□□ 0,04
Rnf213E9Q555 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC15,28■□□□□ 0,04
Rnf213E9Q555 Rab21-202ENSMUST00000218831 843 ntBASIC15,27■□□□□ 0,04
Rnf213E9Q555 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC15,27■□□□□ 0,03
Rnf213E9Q555 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC15,22■□□□□ 0,03
Rnf213E9Q555 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15,2■□□□□ 0,02
Rnf213E9Q555 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15,2■□□□□ 0,02
Rnf213E9Q555 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC15,19■□□□□ 0,02
Rnf213E9Q555 Gm27325-201ENSMUST00000175467 74 ntBASIC15,18■□□□□ 0,02
Rnf213E9Q555 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC15,13■□□□□ 0,01
Rnf213E9Q555 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC15,1■□□□□ 0,01
Rnf213E9Q555 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15,08■□□□□ 0
Rnf213E9Q555 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC15,03■□□□□ -0
Rnf213E9Q555 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0,01
Rnf213E9Q555 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC14,99□□□□□ -0,01
Rnf213E9Q555 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC14,97□□□□□ -0,01
Rnf213E9Q555 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14,96□□□□□ -0,01
Rnf213E9Q555 Gm24804-201ENSMUST00000174982 85 ntBASIC14,96□□□□□ -0,02
Rnf213E9Q555 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC14,92□□□□□ -0,02
Rnf213E9Q555 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14,9□□□□□ -0,02
Rnf213E9Q555 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC14,9□□□□□ -0,02
Rnf213E9Q555 Gm17082-201ENSMUST00000166043 1091 ntBASIC14,88□□□□□ -0,03
Rnf213E9Q555 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14,87□□□□□ -0,03
Rnf213E9Q555 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC14,85□□□□□ -0,03
Rnf213E9Q555 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14,84□□□□□ -0,03
Rnf213E9Q555 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC14,83□□□□□ -0,04
Rnf213E9Q555 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC14,77□□□□□ -0,05
Rnf213E9Q555 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14,76□□□□□ -0,05
Rnf213E9Q555 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14,74□□□□□ -0,05
Rnf213E9Q555 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC14,73□□□□□ -0,05
Rnf213E9Q555 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14,73□□□□□ -0,05
Rnf213E9Q555 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14,69□□□□□ -0,06
Rnf213E9Q555 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14,66□□□□□ -0,06
Rnf213E9Q555 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14,66□□□□□ -0,06
Rnf213E9Q555 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC14,63□□□□□ -0,07
Rnf213E9Q555 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC14,62□□□□□ -0,07
Rnf213E9Q555 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC14,59□□□□□ -0,07
Rnf213E9Q555 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC14,58□□□□□ -0,08
Rnf213E9Q555 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC14,57□□□□□ -0,08
Rnf213E9Q555 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC14,57□□□□□ -0,08
Rnf213E9Q555 Zfp131-205ENSMUST00000223812 663 ntBASIC14,56□□□□□ -0,08
Rnf213E9Q555 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC14,56□□□□□ -0,08
Rnf213E9Q555 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC14,56□□□□□ -0,08
Rnf213E9Q555 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14,55□□□□□ -0,08
Rnf213E9Q555 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC14,55□□□□□ -0,08
Rnf213E9Q555 Gm27322-201ENSMUST00000184007 104 ntBASIC14,53□□□□□ -0,08
Rnf213E9Q555 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC14,53□□□□□ -0,08
Rnf213E9Q555 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC14,51□□□□□ -0,09
Rnf213E9Q555 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC14,5□□□□□ -0,09
Rnf213E9Q555 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC14,5□□□□□ -0,09
Rnf213E9Q555 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC14,49□□□□□ -0,09
Rnf213E9Q555 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC14,48□□□□□ -0,09
Rnf213E9Q555 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC14,46□□□□□ -0,09
Rnf213E9Q555 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC14,44□□□□□ -0,1
Rnf213E9Q555 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC14,44□□□□□ -0,1
Rnf213E9Q555 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC14,4□□□□□ -0,1
Rnf213E9Q555 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC14,39□□□□□ -0,11
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms