RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Gm10271F6WY25 52 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Clec4b2Q67DU8 208 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Map1lc3aQ91VR7 121 aa13.78□□□□□ -0.2
Lig3-209ENSMUST00000173009 Gm5426J3QNM7 103 aa13.77□□□□□ -0.21
Lig3-209ENSMUST00000173009 Atp5lQ9CPQ8 103 aa13.77□□□□□ -0.21
Lig3-209ENSMUST00000173009 Trav16d-dv11A0A075B617 117 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Trav6n-6A0A075B6B2 114 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Nat8f4G5E8L3 226 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Sh2d1aO88890 126 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Pmis2Q497Q9 96 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Gm9918Q8BUR5 174 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Olfr1262Q8VGN2 304 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Mrpl32Q9DCI9 187 aaKnown RBP13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Trbv13-2A0A140T8N6 113 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 9130204L05RikG3UWB8 92 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 OdaphJ3QNT8 126 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 F11rO88792 300 aa13.76□□□□□ -0.21
Lig3-209ENSMUST00000173009 Ceacam12Q3UKP4 300 aa13.75□□□□□ -0.21
Lig3-209ENSMUST00000173009 Trav14n-2A0A0G2JDF5 121 aa13.74□□□□□ -0.21
Lig3-209ENSMUST00000173009 CebpgP53568 150 aa13.74□□□□□ -0.21
Lig3-209ENSMUST00000173009 Fam19a2Q7TPG7 131 aa13.74□□□□□ -0.21
Lig3-209ENSMUST00000173009 Il1f10Q8R459 152 aa13.74□□□□□ -0.21
Lig3-209ENSMUST00000173009 Spink1P09036 80 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Cst10Q9JM84 148 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Ighv1-49A0A0A6YWX2 117 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Igkv4-53A0A0G2JFC6 119 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Hist1h2bmP10854 126 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Hist1h2bhQ64478 126 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Hist2h2bbQ64525 126 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Bles03Q8VD62 251 aa13.73□□□□□ -0.21
Lig3-209ENSMUST00000173009 Gm9513B3GLJ6 99 aa13.72□□□□□ -0.21
Lig3-209ENSMUST00000173009 Esp3J3QN49 87 aa13.72□□□□□ -0.21
Lig3-209ENSMUST00000173009 TtrP07309 147 aa13.72□□□□□ -0.21
Lig3-209ENSMUST00000173009 NpsP0C0P8 89 aa13.72□□□□□ -0.21
Lig3-209ENSMUST00000173009 Rpl32P62911 135 aaKnown RBP13.71□□□□□ -0.21
Lig3-209ENSMUST00000173009 March3Q8BRX9 218 aa13.71□□□□□ -0.21
Lig3-209ENSMUST00000173009 Sertad4A7DTG3 377 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 Gm28044L7N1X0 119 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 P01729 129 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 S100a1P56565 94 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 Megf9Q8BH27 600 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 Leprotl1Q9CQ74 131 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 Klk5Q9D140 293 aa13.71□□□□□ -0.22
Lig3-209ENSMUST00000173009 Dync2h1Q45VK7 4306 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Gm17472A0A075B683 117 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Nat8b-psE0CYC6 232 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Gm10772F7AIG4 85 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Lgals6O54891 301 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 TbpP29037 316 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 OxtP35454 125 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Lamtor2Q9JHS3 125 aa13.7□□□□□ -0.22
Lig3-209ENSMUST00000173009 Mrps10Q80ZK0 160 aaKnown RBP13.69□□□□□ -0.22
Lig3-209ENSMUST00000173009 Gm15294V9GXA7 121 aa13.69□□□□□ -0.22
Lig3-209ENSMUST00000173009 Trav14-2A0A075B694 121 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Vsig4F6TUL9 280 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Defa2P28309 93 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Cox11Q6P8I6 275 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Atp6v0e2Q91XE7 81 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Tcrg-C1A0A075B5Z0 172 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Ceacam15A0A0B4J1L0 234 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Gm43218A0A0G2JGT0 114 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Tcrg-C3L7N479 172 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 9130213A22RikQ3V3T2 120 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 Ly6g6cQ9Z1Q4 126 aa13.68□□□□□ -0.22
Lig3-209ENSMUST00000173009 RnasekQ8K3C0 98 aa13.67□□□□□ -0.22
Lig3-209ENSMUST00000173009 Tex48Q9DA81 110 aa13.67□□□□□ -0.22
Lig3-209ENSMUST00000173009 Defa6P50704 93 aa13.66□□□□□ -0.22
Lig3-209ENSMUST00000173009 Chchd1Q9CQA6 118 aa13.66□□□□□ -0.22
Lig3-209ENSMUST00000173009 Rab5bP61021 215 aa13.66□□□□□ -0.22
Lig3-209ENSMUST00000173009 Dnah1E9Q8T7 4250 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Defa30E9QPZ2 93 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Tmem136Q3TYE7 245 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Snhg11Q4G0K9 87 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Stard4Q99JV5 224 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Ramp1Q9WTJ5 148 aa13.65□□□□□ -0.22
Lig3-209ENSMUST00000173009 Igkv4-78A0A0A6YYE5 119 aa13.64□□□□□ -0.23
Lig3-209ENSMUST00000173009 Slc25a20Q9Z2Z6 301 aaKnown RBP13.64□□□□□ -0.23
Lig3-209ENSMUST00000173009 Fabp4P04117 132 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 4930596D02RikQ3V0H9 216 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Tmem88Q9D0N8 159 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Card19Q9D1I2 183 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Cryba4Q9JJV0 196 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Dnah7bL7N1Y0 4068 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Lcn2P11672 200 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Tomm7Q9D173 55 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 Atg101Q9D8Z6 218 aa13.63□□□□□ -0.23
Lig3-209ENSMUST00000173009 CrygaP04345 174 aa13.62□□□□□ -0.23
Lig3-209ENSMUST00000173009 Tnfsf18Q7TS55 173 aa13.62□□□□□ -0.23
Lig3-209ENSMUST00000173009 Pdzd11Q9CZG9 140 aa13.62□□□□□ -0.23
Lig3-209ENSMUST00000173009 Rpl39P62892 51 aa13.61□□□□□ -0.23
Lig3-209ENSMUST00000173009 EsdQ9R0P3 282 aa13.61□□□□□ -0.23
Lig3-209ENSMUST00000173009 Defa35E9QLQ1 93 aa13.6□□□□□ -0.23
Lig3-209ENSMUST00000173009 Ormdl2Q9CQZ0 153 aa13.6□□□□□ -0.23
Lig3-209ENSMUST00000173009 2310061N02RikQ9D6S9 174 aa13.6□□□□□ -0.23
Lig3-209ENSMUST00000173009 Gm42420A0A0J9YUQ2 99 aa13.59□□□□□ -0.23
Lig3-209ENSMUST00000173009 Gm13030A2APQ6 143 aa13.59□□□□□ -0.23
Lig3-209ENSMUST00000173009 Tma7Q8K003 64 aaKnown RBP13.59□□□□□ -0.23
Lig3-209ENSMUST00000173009 SmagpQ99KC7 97 aa13.59□□□□□ -0.23
Lig3-209ENSMUST00000173009 Fras1Q80T14 4010 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 95.4 ms