Protein–RNA interactions for Protein: Q9CZG9

Pdzd11, PDZ domain-containing protein 11, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzd11Q9CZG9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Pdzd11Q9CZG9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pdzd11Q9CZG9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pdzd11Q9CZG9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Pdzd11Q9CZG9 Psd-208ENSMUST00000224556 2034 ntBASIC25.1■■□□□ 1.61
Pdzd11Q9CZG9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Pdzd11Q9CZG9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pdzd11Q9CZG9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pdzd11Q9CZG9 Gm25239-201ENSMUST00000174915 86 ntBASIC24.07■■□□□ 1.44
Pdzd11Q9CZG9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Pdzd11Q9CZG9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pdzd11Q9CZG9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pdzd11Q9CZG9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pdzd11Q9CZG9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Pdzd11Q9CZG9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pdzd11Q9CZG9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Pdzd11Q9CZG9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Pdzd11Q9CZG9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pdzd11Q9CZG9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pdzd11Q9CZG9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pdzd11Q9CZG9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pdzd11Q9CZG9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Pdzd11Q9CZG9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Pdzd11Q9CZG9 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.18■■□□□ 1.3
Pdzd11Q9CZG9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pdzd11Q9CZG9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pdzd11Q9CZG9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.03■■□□□ 1.28
Pdzd11Q9CZG9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pdzd11Q9CZG9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pdzd11Q9CZG9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Pdzd11Q9CZG9 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pdzd11Q9CZG9 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
Pdzd11Q9CZG9 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Pdzd11Q9CZG9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Pdzd11Q9CZG9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Pdzd11Q9CZG9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.46■■□□□ 1.19
Pdzd11Q9CZG9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Pdzd11Q9CZG9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Pdzd11Q9CZG9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pdzd11Q9CZG9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Pdzd11Q9CZG9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdzd11Q9CZG9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdzd11Q9CZG9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdzd11Q9CZG9 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.26■■□□□ 1.15
Pdzd11Q9CZG9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.2■■□□□ 1.14
Pdzd11Q9CZG9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdzd11Q9CZG9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Pdzd11Q9CZG9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdzd11Q9CZG9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdzd11Q9CZG9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pdzd11Q9CZG9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.02■■□□□ 1.12
Pdzd11Q9CZG9 Zxda-201ENSMUST00000117281 2621 ntBASIC21.97■■□□□ 1.11
Pdzd11Q9CZG9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Pdzd11Q9CZG9 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Pdzd11Q9CZG9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pdzd11Q9CZG9 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdzd11Q9CZG9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pdzd11Q9CZG9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Pdzd11Q9CZG9 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.85■■□□□ 1.09
Pdzd11Q9CZG9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pdzd11Q9CZG9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pdzd11Q9CZG9 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdzd11Q9CZG9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pdzd11Q9CZG9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pdzd11Q9CZG9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.77■■□□□ 1.08
Pdzd11Q9CZG9 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pdzd11Q9CZG9 Gm15042-201ENSMUST00000120212 883 ntBASIC21.74■■□□□ 1.07
Pdzd11Q9CZG9 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pdzd11Q9CZG9 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pdzd11Q9CZG9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pdzd11Q9CZG9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pdzd11Q9CZG9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pdzd11Q9CZG9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pdzd11Q9CZG9 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.62■■□□□ 1.05
Pdzd11Q9CZG9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pdzd11Q9CZG9 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pdzd11Q9CZG9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pdzd11Q9CZG9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pdzd11Q9CZG9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Pdzd11Q9CZG9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdzd11Q9CZG9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pdzd11Q9CZG9 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Pdzd11Q9CZG9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Pdzd11Q9CZG9 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Pdzd11Q9CZG9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Pdzd11Q9CZG9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pdzd11Q9CZG9 Gm15045-201ENSMUST00000117359 883 ntBASIC21.33■■□□□ 1.01
Pdzd11Q9CZG9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.32■■□□□ 1
Pdzd11Q9CZG9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdzd11Q9CZG9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzd11Q9CZG9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdzd11Q9CZG9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC21.3■■□□□ 1
Pdzd11Q9CZG9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Pdzd11Q9CZG9 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pdzd11Q9CZG9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pdzd11Q9CZG9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdzd11Q9CZG9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdzd11Q9CZG9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdzd11Q9CZG9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pdzd11Q9CZG9 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms