Protein–RNA interactions for Protein: P01729

Ig lambda-2 chain V region MOPC 315, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01729 Gm25239-201ENSMUST00000174915 86 ntBASIC26.28■■□□□ 1.8
P01729 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
P01729 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
P01729 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
P01729 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
P01729 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
P01729 Gm15042-201ENSMUST00000120212 883 ntBASIC23.11■■□□□ 1.29
P01729 Gm24109-201ENSMUST00000175489 103 ntBASIC22.69■■□□□ 1.22
P01729 Gm15045-201ENSMUST00000117359 883 ntBASIC22.51■■□□□ 1.19
P01729 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
P01729 Psd-208ENSMUST00000224556 2034 ntBASIC22.4■■□□□ 1.18
P01729 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
P01729 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
P01729 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
P01729 Gm23366-201ENSMUST00000175022 89 ntBASIC22.07■■□□□ 1.12
P01729 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
P01729 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
P01729 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
P01729 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
P01729 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
P01729 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21.6■■□□□ 1.05
P01729 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
P01729 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
P01729 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
P01729 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
P01729 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
P01729 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
P01729 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
P01729 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
P01729 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.18■□□□□ 0.98
P01729 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
P01729 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
P01729 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
P01729 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
P01729 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
P01729 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01729 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20.96■□□□□ 0.95
P01729 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.95■□□□□ 0.94
P01729 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P01729 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
P01729 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
P01729 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.83■□□□□ 0.93
P01729 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P01729 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20.8■□□□□ 0.92
P01729 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
P01729 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
P01729 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P01729 Gm25238-201ENSMUST00000174914 89 ntBASIC20.66■□□□□ 0.9
P01729 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P01729 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
P01729 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P01729 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC20.52■□□□□ 0.87
P01729 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
P01729 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
P01729 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
P01729 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20.42■□□□□ 0.86
P01729 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.4■□□□□ 0.86
P01729 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
P01729 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
P01729 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.33■□□□□ 0.85
P01729 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
P01729 Gm27325-201ENSMUST00000175467 74 ntBASIC20.25■□□□□ 0.83
P01729 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.23■□□□□ 0.83
P01729 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
P01729 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
P01729 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
P01729 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
P01729 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01729 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC20.13■□□□□ 0.81
P01729 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20.13■□□□□ 0.81
P01729 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.02■□□□□ 0.79
P01729 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01729 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01729 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
P01729 CT025624.2-201ENSMUST00000223609 1909 ntBASIC19.92■□□□□ 0.78
P01729 Gm25262-201ENSMUST00000174934 133 ntBASIC19.9■□□□□ 0.78
P01729 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
P01729 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
P01729 Rab21-202ENSMUST00000218831 843 ntBASIC19.88■□□□□ 0.77
P01729 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P01729 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
P01729 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01729 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
P01729 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.82■□□□□ 0.76
P01729 Gm42596-201ENSMUST00000196305 1958 ntBASIC19.81■□□□□ 0.76
P01729 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
P01729 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P01729 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P01729 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
P01729 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
P01729 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
P01729 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
P01729 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
P01729 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
P01729 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
P01729 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
P01729 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.68■□□□□ 0.74
P01729 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
P01729 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
P01729 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms