RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Gm10271F6WY25 52 aa13.78□□□□□ -0.2
Lig3-204ENSMUST00000131537 Clec4b2Q67DU8 208 aa13.78□□□□□ -0.2
Lig3-204ENSMUST00000131537 Map1lc3aQ91VR7 121 aa13.78□□□□□ -0.2
Lig3-204ENSMUST00000131537 Gm5426J3QNM7 103 aa13.77□□□□□ -0.21
Lig3-204ENSMUST00000131537 Atp5lQ9CPQ8 103 aa13.77□□□□□ -0.21
Lig3-204ENSMUST00000131537 Trav16d-dv11A0A075B617 117 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Trav6n-6A0A075B6B2 114 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Nat8f4G5E8L3 226 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Sh2d1aO88890 126 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Pmis2Q497Q9 96 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Gm9918Q8BUR5 174 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Olfr1262Q8VGN2 304 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Mrpl32Q9DCI9 187 aaKnown RBP13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Trbv13-2A0A140T8N6 113 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 9130204L05RikG3UWB8 92 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 OdaphJ3QNT8 126 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 F11rO88792 300 aa13.76□□□□□ -0.21
Lig3-204ENSMUST00000131537 Ceacam12Q3UKP4 300 aa13.75□□□□□ -0.21
Lig3-204ENSMUST00000131537 Trav14n-2A0A0G2JDF5 121 aa13.74□□□□□ -0.21
Lig3-204ENSMUST00000131537 CebpgP53568 150 aa13.74□□□□□ -0.21
Lig3-204ENSMUST00000131537 Fam19a2Q7TPG7 131 aa13.74□□□□□ -0.21
Lig3-204ENSMUST00000131537 Il1f10Q8R459 152 aa13.74□□□□□ -0.21
Lig3-204ENSMUST00000131537 Spink1P09036 80 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Cst10Q9JM84 148 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Ighv1-49A0A0A6YWX2 117 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Igkv4-53A0A0G2JFC6 119 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Hist1h2bmP10854 126 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Hist1h2bhQ64478 126 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Hist2h2bbQ64525 126 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Bles03Q8VD62 251 aa13.73□□□□□ -0.21
Lig3-204ENSMUST00000131537 Gm9513B3GLJ6 99 aa13.72□□□□□ -0.21
Lig3-204ENSMUST00000131537 Esp3J3QN49 87 aa13.72□□□□□ -0.21
Lig3-204ENSMUST00000131537 TtrP07309 147 aa13.72□□□□□ -0.21
Lig3-204ENSMUST00000131537 NpsP0C0P8 89 aa13.72□□□□□ -0.21
Lig3-204ENSMUST00000131537 Rpl32P62911 135 aaKnown RBP13.71□□□□□ -0.21
Lig3-204ENSMUST00000131537 March3Q8BRX9 218 aa13.71□□□□□ -0.21
Lig3-204ENSMUST00000131537 Sertad4A7DTG3 377 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 Gm28044L7N1X0 119 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 P01729 129 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 S100a1P56565 94 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 Megf9Q8BH27 600 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 Leprotl1Q9CQ74 131 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 Klk5Q9D140 293 aa13.71□□□□□ -0.22
Lig3-204ENSMUST00000131537 Dync2h1Q45VK7 4306 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Gm17472A0A075B683 117 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Nat8b-psE0CYC6 232 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Gm10772F7AIG4 85 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Lgals6O54891 301 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 TbpP29037 316 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 OxtP35454 125 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Lamtor2Q9JHS3 125 aa13.7□□□□□ -0.22
Lig3-204ENSMUST00000131537 Mrps10Q80ZK0 160 aaKnown RBP13.69□□□□□ -0.22
Lig3-204ENSMUST00000131537 Gm15294V9GXA7 121 aa13.69□□□□□ -0.22
Lig3-204ENSMUST00000131537 Trav14-2A0A075B694 121 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Vsig4F6TUL9 280 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Defa2P28309 93 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Cox11Q6P8I6 275 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Atp6v0e2Q91XE7 81 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Tcrg-C1A0A075B5Z0 172 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Ceacam15A0A0B4J1L0 234 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Gm43218A0A0G2JGT0 114 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Tcrg-C3L7N479 172 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 9130213A22RikQ3V3T2 120 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 Ly6g6cQ9Z1Q4 126 aa13.68□□□□□ -0.22
Lig3-204ENSMUST00000131537 RnasekQ8K3C0 98 aa13.67□□□□□ -0.22
Lig3-204ENSMUST00000131537 Tex48Q9DA81 110 aa13.67□□□□□ -0.22
Lig3-204ENSMUST00000131537 Defa6P50704 93 aa13.66□□□□□ -0.22
Lig3-204ENSMUST00000131537 Chchd1Q9CQA6 118 aa13.66□□□□□ -0.22
Lig3-204ENSMUST00000131537 Rab5bP61021 215 aa13.66□□□□□ -0.22
Lig3-204ENSMUST00000131537 Dnah1E9Q8T7 4250 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Defa30E9QPZ2 93 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Tmem136Q3TYE7 245 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Snhg11Q4G0K9 87 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Stard4Q99JV5 224 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Ramp1Q9WTJ5 148 aa13.65□□□□□ -0.22
Lig3-204ENSMUST00000131537 Igkv4-78A0A0A6YYE5 119 aa13.64□□□□□ -0.23
Lig3-204ENSMUST00000131537 Slc25a20Q9Z2Z6 301 aaKnown RBP13.64□□□□□ -0.23
Lig3-204ENSMUST00000131537 Fabp4P04117 132 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 4930596D02RikQ3V0H9 216 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Tmem88Q9D0N8 159 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Card19Q9D1I2 183 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Cryba4Q9JJV0 196 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Dnah7bL7N1Y0 4068 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Lcn2P11672 200 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Tomm7Q9D173 55 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 Atg101Q9D8Z6 218 aa13.63□□□□□ -0.23
Lig3-204ENSMUST00000131537 CrygaP04345 174 aa13.62□□□□□ -0.23
Lig3-204ENSMUST00000131537 Tnfsf18Q7TS55 173 aa13.62□□□□□ -0.23
Lig3-204ENSMUST00000131537 Pdzd11Q9CZG9 140 aa13.62□□□□□ -0.23
Lig3-204ENSMUST00000131537 Rpl39P62892 51 aa13.61□□□□□ -0.23
Lig3-204ENSMUST00000131537 EsdQ9R0P3 282 aa13.61□□□□□ -0.23
Lig3-204ENSMUST00000131537 Defa35E9QLQ1 93 aa13.6□□□□□ -0.23
Lig3-204ENSMUST00000131537 Ormdl2Q9CQZ0 153 aa13.6□□□□□ -0.23
Lig3-204ENSMUST00000131537 2310061N02RikQ9D6S9 174 aa13.6□□□□□ -0.23
Lig3-204ENSMUST00000131537 Gm42420A0A0J9YUQ2 99 aa13.59□□□□□ -0.23
Lig3-204ENSMUST00000131537 Gm13030A2APQ6 143 aa13.59□□□□□ -0.23
Lig3-204ENSMUST00000131537 Tma7Q8K003 64 aaKnown RBP13.59□□□□□ -0.23
Lig3-204ENSMUST00000131537 SmagpQ99KC7 97 aa13.59□□□□□ -0.23
Lig3-204ENSMUST00000131537 Fras1Q80T14 4010 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 47.9 ms