RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 A0A286YCQ8 80 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 Defa34D3Z0J0 93 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 Defa37K9J724 93 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 Defa5P28312 93 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 PerpQ9JK95 193 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 Trbv13-1A0A0B4J1P8 112 aa16.81■□□□□ 0.28
Cln6-201ENSMUST00000034776 Egr2P08152 470 aa16.8■□□□□ 0.28
Cln6-201ENSMUST00000034776 Trdv2-1A0A0G2JGB9 116 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 NipblQ6KCD5 2798 aaKnown RBP16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Scgb1b11A0A087WQJ0 93 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Gm11027G8JL69 66 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Ca1P13634 261 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Ifi27l2aQ8R412 90 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Crlf1Q9JM58 425 aa16.79■□□□□ 0.28
Cln6-201ENSMUST00000034776 Setd2E9Q5F9 2537 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Dmbt1Q60997 2085 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Gm10271F6WY25 52 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Nat8f4G5E8L3 226 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Scgb1b3J3QJY4 93 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Htr1dQ61224 374 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 GalmQ8K157 342 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Cd164l2Q9D6W7 172 aa16.78■□□□□ 0.28
Cln6-201ENSMUST00000034776 Gm3250E9Q1M3 230 aa16.77■□□□□ 0.28
Cln6-201ENSMUST00000034776 Sap30O88574 220 aa16.77■□□□□ 0.28
Cln6-201ENSMUST00000034776 Chac1Q8R3J5 223 aa16.77■□□□□ 0.28
Cln6-201ENSMUST00000034776 Lypd5Q9D7Z7 256 aa16.77■□□□□ 0.28
Cln6-201ENSMUST00000034776 Lyzl4Q9D925 145 aa16.77■□□□□ 0.28
Cln6-201ENSMUST00000034776 Krtap24-1G3X9A2 248 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 P06329 120 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 Rpl36-ps4A0A140T8U4 117 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 Gm7849D3YX03 116 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 B230217C12RikE9Q3Z1 139 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 Ndufc2Q9CQ54 120 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 Josd1Q9DBJ6 202 aa16.76■□□□□ 0.27
Cln6-201ENSMUST00000034776 P01794 123 aa16.75■□□□□ 0.27
Cln6-201ENSMUST00000034776 TcraP01849 138 aa16.75■□□□□ 0.27
Cln6-201ENSMUST00000034776 Gm9922Q8C3P1 144 aa16.75■□□□□ 0.27
Cln6-201ENSMUST00000034776 AamdcQ8R0P4 122 aa16.75■□□□□ 0.27
Cln6-201ENSMUST00000034776 Ighv1-85A0A075B5Y6 117 aa16.74■□□□□ 0.27
Cln6-201ENSMUST00000034776 CrxO54751 299 aa16.74■□□□□ 0.27
Cln6-201ENSMUST00000034776 Mllt11P97783 90 aa16.74■□□□□ 0.27
Cln6-201ENSMUST00000034776 Pmis2Q497Q9 96 aa16.74■□□□□ 0.27
Cln6-201ENSMUST00000034776 Akap13E9Q394 2776 aa16.74■□□□□ 0.27
Cln6-201ENSMUST00000034776 Gm10509O88255 85 aa16.73■□□□□ 0.27
Cln6-201ENSMUST00000034776 Crip2Q9DCT8 208 aaKnown RBP16.73■□□□□ 0.27
Cln6-201ENSMUST00000034776 Gm10604Q3V0X7 143 aa16.73■□□□□ 0.27
Cln6-201ENSMUST00000034776 Gm10300Q8C8P7 189 aa16.73■□□□□ 0.27
Cln6-201ENSMUST00000034776 Tspo2Q9CRZ8 162 aa16.73■□□□□ 0.27
Cln6-201ENSMUST00000034776 Defa35E9QLQ1 93 aa16.72■□□□□ 0.27
Cln6-201ENSMUST00000034776 Trav7d-3Q5R1I1 112 aa16.72■□□□□ 0.27
Cln6-201ENSMUST00000034776 H1fxQ80ZM5 188 aa16.72■□□□□ 0.27
Cln6-201ENSMUST00000034776 CicQ924A2 2510 aa16.71■□□□□ 0.26
Cln6-201ENSMUST00000034776 PrlhG3UWC3 86 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Gpx1P11352 201 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Gm815Q3UWS2 115 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Defb42Q8BVB5 75 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Lyrm9Q3UN90 78 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Il19Q8CJ70 176 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 HampQ9EQ21 83 aa16.7■□□□□ 0.26
Cln6-201ENSMUST00000034776 Ceacam15A0A0B4J1L0 234 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 Nhlrc1Q8BR37 401 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 P01738 130 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 Smrp1Q2MH31 260 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 BC025920Q3US60 128 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 CdsnQ7TPC1 561 aa16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 Slc25a20Q9Z2Z6 301 aaKnown RBP16.69■□□□□ 0.26
Cln6-201ENSMUST00000034776 Ly6c2P0CW03 131 aa16.68■□□□□ 0.26
Cln6-201ENSMUST00000034776 P18527 97 aa16.68■□□□□ 0.26
Cln6-201ENSMUST00000034776 Cox17P56394 63 aa16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 Helz2E9QAM5 2947 aaKnown RBP16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 A530064D06RikQ8BNV8 229 aa16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 Q99M08 65 aa16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 Prss29Q99MS4 279 aa16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 Ndufs7Q9DC70 224 aa16.67■□□□□ 0.26
Cln6-201ENSMUST00000034776 Ighv6-7A0A0A6YWU3 119 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 Rpl39P62892 51 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 Isg15Q64339 161 aaKnown RBP16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 Tax1bp3Q9DBG9 124 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 Trav9n-2A0A0G2JDP3 113 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 P01741 114 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 4930596D02RikQ3V0H9 216 aa16.66■□□□□ 0.26
Cln6-201ENSMUST00000034776 Gm765B2RVL9 189 aa16.65■□□□□ 0.26
Cln6-201ENSMUST00000034776 Cox6b1P56391 86 aaKnown RBP16.65■□□□□ 0.26
Cln6-201ENSMUST00000034776 Gm16442D3YZG3 307 aa16.64■□□□□ 0.25
Cln6-201ENSMUST00000034776 Q9DAA3 117 aa16.64■□□□□ 0.25
Cln6-201ENSMUST00000034776 Tenm4Q3UHK6 2771 aa16.64■□□□□ 0.25
Cln6-201ENSMUST00000034776 Ovol2Q8CIV7 274 aa16.64■□□□□ 0.25
Cln6-201ENSMUST00000034776 Fgfbp3Q1HCM0 245 aa16.63■□□□□ 0.25
Cln6-201ENSMUST00000034776 Igfn1Q3KNY0 2849 aa16.63■□□□□ 0.25
Cln6-201ENSMUST00000034776 Gnb1lQ9EQ15 326 aa16.62■□□□□ 0.25
Cln6-201ENSMUST00000034776 Fbn1Q61554 2873 aaKnown RBP16.62■□□□□ 0.25
Cln6-201ENSMUST00000034776 Gm3233E9Q2H5 230 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Fxyd5P97808 178 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Ss18Q62280 418 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 EsdQ9R0P3 282 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Gm45521A0A1B0GRK0 198 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 TtrP07309 147 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Q9D8Q6 235 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Tmem263Q9DAM7 115 aa16.61■□□□□ 0.25
Cln6-201ENSMUST00000034776 Tmem170bP86050 132 aa16.6■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 130.8 ms