Protein–RNA interactions for Protein: Q3US60

BC025920, MCG148085, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC025920Q3US60 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,63■■□□□ 1,53
BC025920Q3US60 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,75■■□□□ 1,39
BC025920Q3US60 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
BC025920Q3US60 Gm25239-201ENSMUST00000174915 86 ntBASIC23,46■■□□□ 1,35
BC025920Q3US60 Psd-208ENSMUST00000224556 2034 ntBASIC23,16■■□□□ 1,3
BC025920Q3US60 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22,97■■□□□ 1,27
BC025920Q3US60 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC22,61■■□□□ 1,21
BC025920Q3US60 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC22,45■■□□□ 1,18
BC025920Q3US60 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,33■■□□□ 1,17
BC025920Q3US60 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,09■■□□□ 1,13
BC025920Q3US60 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
BC025920Q3US60 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC22,02■■□□□ 1,12
BC025920Q3US60 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1,11
BC025920Q3US60 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC21,76■■□□□ 1,07
BC025920Q3US60 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
BC025920Q3US60 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
BC025920Q3US60 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC21,63■■□□□ 1,05
BC025920Q3US60 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC21,47■■□□□ 1,03
BC025920Q3US60 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC21,46■■□□□ 1,03
BC025920Q3US60 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC21,46■■□□□ 1,03
BC025920Q3US60 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,41■■□□□ 1,02
BC025920Q3US60 Gm15042-201ENSMUST00000120212 883 ntBASIC21,34■■□□□ 1,01
BC025920Q3US60 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC21,27■■□□□ 1
BC025920Q3US60 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,19■□□□□ 0,98
BC025920Q3US60 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,17■□□□□ 0,98
BC025920Q3US60 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC21,08■□□□□ 0,97
BC025920Q3US60 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,07■□□□□ 0,96
BC025920Q3US60 Gm15045-201ENSMUST00000117359 883 ntBASIC21,03■□□□□ 0,96
BC025920Q3US60 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20,97■□□□□ 0,95
BC025920Q3US60 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20,94■□□□□ 0,94
BC025920Q3US60 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC20,9■□□□□ 0,94
BC025920Q3US60 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,88■□□□□ 0,93
BC025920Q3US60 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20,87■□□□□ 0,93
BC025920Q3US60 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20,83■□□□□ 0,92
BC025920Q3US60 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
BC025920Q3US60 Gm42596-201ENSMUST00000196305 1958 ntBASIC20,81■□□□□ 0,92
BC025920Q3US60 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,8■□□□□ 0,92
BC025920Q3US60 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC20,75■□□□□ 0,91
BC025920Q3US60 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
BC025920Q3US60 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20,75■□□□□ 0,91
BC025920Q3US60 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,74■□□□□ 0,91
BC025920Q3US60 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC20,73■□□□□ 0,91
BC025920Q3US60 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC20,71■□□□□ 0,91
BC025920Q3US60 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20,69■□□□□ 0,9
BC025920Q3US60 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC20,6■□□□□ 0,89
BC025920Q3US60 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC20,55■□□□□ 0,88
BC025920Q3US60 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20,52■□□□□ 0,88
BC025920Q3US60 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,5■□□□□ 0,87
BC025920Q3US60 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC20,5■□□□□ 0,87
BC025920Q3US60 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20,48■□□□□ 0,87
BC025920Q3US60 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,44■□□□□ 0,86
BC025920Q3US60 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC20,37■□□□□ 0,85
BC025920Q3US60 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC20,37■□□□□ 0,85
BC025920Q3US60 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20,32■□□□□ 0,84
BC025920Q3US60 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20,23■□□□□ 0,83
BC025920Q3US60 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20,18■□□□□ 0,82
BC025920Q3US60 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20,17■□□□□ 0,82
BC025920Q3US60 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,17■□□□□ 0,82
BC025920Q3US60 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,15■□□□□ 0,82
BC025920Q3US60 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,13■□□□□ 0,81
BC025920Q3US60 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,12■□□□□ 0,81
BC025920Q3US60 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20,08■□□□□ 0,8
BC025920Q3US60 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20,07■□□□□ 0,8
BC025920Q3US60 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20,05■□□□□ 0,8
BC025920Q3US60 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20,03■□□□□ 0,8
BC025920Q3US60 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC19,98■□□□□ 0,79
BC025920Q3US60 Gm24109-201ENSMUST00000175489 103 ntBASIC19,98■□□□□ 0,79
BC025920Q3US60 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19,93■□□□□ 0,78
BC025920Q3US60 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19,91■□□□□ 0,78
BC025920Q3US60 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC19,87■□□□□ 0,77
BC025920Q3US60 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19,86■□□□□ 0,77
BC025920Q3US60 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19,84■□□□□ 0,77
BC025920Q3US60 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19,83■□□□□ 0,76
BC025920Q3US60 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19,82■□□□□ 0,76
BC025920Q3US60 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19,82■□□□□ 0,76
BC025920Q3US60 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19,8■□□□□ 0,76
BC025920Q3US60 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC19,76■□□□□ 0,75
BC025920Q3US60 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19,76■□□□□ 0,75
BC025920Q3US60 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19,75■□□□□ 0,75
BC025920Q3US60 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19,74■□□□□ 0,75
BC025920Q3US60 Gm23366-201ENSMUST00000175022 89 ntBASIC19,71■□□□□ 0,75
BC025920Q3US60 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC19,65■□□□□ 0,74
BC025920Q3US60 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19,63■□□□□ 0,73
BC025920Q3US60 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19,63■□□□□ 0,73
BC025920Q3US60 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19,62■□□□□ 0,73
BC025920Q3US60 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,73
BC025920Q3US60 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
BC025920Q3US60 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19,57■□□□□ 0,72
BC025920Q3US60 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19,56■□□□□ 0,72
BC025920Q3US60 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19,56■□□□□ 0,72
BC025920Q3US60 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19,54■□□□□ 0,72
BC025920Q3US60 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC19,52■□□□□ 0,72
BC025920Q3US60 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,72
BC025920Q3US60 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19,51■□□□□ 0,71
BC025920Q3US60 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19,5■□□□□ 0,71
BC025920Q3US60 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
BC025920Q3US60 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
BC025920Q3US60 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
BC025920Q3US60 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19,39■□□□□ 0,69
BC025920Q3US60 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19,38■□□□□ 0,69
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms