RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 NischQ80TM9 1593 aa46.84■■■■■ 5.09
Cln6-201ENSMUST00000034776 Gm35339A0A140LHH9 1649 aa46.55■■■■■ 5.04
Cln6-201ENSMUST00000034776 Abcc9P70170 1546 aa45.5■■■■■ 4.87
Cln6-201ENSMUST00000034776 Abcc8B2RUS7 1588 aa44.73■■■■■ 4.75
Cln6-201ENSMUST00000034776 Rhox8Q6VSS7 320 aa42.39■■■■■ 4.38
Cln6-201ENSMUST00000034776 ScribQ80U72 1612 aa42.04■■■■■ 4.32
Cln6-201ENSMUST00000034776 Dcaf1Q80TR8 1506 aa41.71■■■■■ 4.27
Cln6-201ENSMUST00000034776 Rtl1Q7M732 1744 aa41.46■■■■■ 4.23
Cln6-201ENSMUST00000034776 Kdm5dQ62240 1548 aa41.07■■■■■ 4.17
Cln6-201ENSMUST00000034776 Rb1cc1Q9ESK9 1588 aa40.96■■■■■ 4.15
Cln6-201ENSMUST00000034776 NacadQ5SWP3 1504 aa40.89■■■■■ 4.14
Cln6-201ENSMUST00000034776 Ccdc180J3QNE4 1664 aa40.71■■■■■ 4.11
Cln6-201ENSMUST00000034776 Baz1aO88379 1555 aa40.52■■■■■ 4.08
Cln6-201ENSMUST00000034776 Zcchc6Q5BLK4 1491 aaKnown RBP40.17■■■■■ 4.02
Cln6-201ENSMUST00000034776 Crybg2B7ZCC2 1516 aa40.07■■■■■ 4
Cln6-201ENSMUST00000034776 Sycp2Q9CUU3 1500 aa40.03■■■■■ 4
Cln6-201ENSMUST00000034776 Smarca2Q6DIC0 1577 aa39.55■■■■□ 3.92
Cln6-201ENSMUST00000034776 Ccdc136Q3TVA9 1136 aa39.42■■■■□ 3.9
Cln6-201ENSMUST00000034776 BicraF8VPZ9 1578 aa39.22■■■■□ 3.87
Cln6-201ENSMUST00000034776 Trim41Q5NCC3 630 aa38.83■■■■□ 3.81
Cln6-201ENSMUST00000034776 HrcG5E8J6 738 aa38.73■■■■□ 3.79
Cln6-201ENSMUST00000034776 Cecr2E9Q2Z1 1453 aa38.71■■■■□ 3.79
Cln6-201ENSMUST00000034776 Brd4Q9ESU6 1400 aaKnown RBP38.52■■■■□ 3.76
Cln6-201ENSMUST00000034776 Synj1Q8CHC4 1574 aa38.26■■■■□ 3.72
Cln6-201ENSMUST00000034776 CftrP26361 1476 aa38.14■■■■□ 3.7
Cln6-201ENSMUST00000034776 Smarca4Q3TKT4 1613 aaKnown RBP38.12■■■■□ 3.69
Cln6-201ENSMUST00000034776 Cttnbp2B9EJA2 1648 aa37.98■■■■□ 3.67
Cln6-201ENSMUST00000034776 Golga3P55937 1487 aa37.89■■■■□ 3.66
Cln6-201ENSMUST00000034776 Cep164Q5DU05 1446 aa37.79■■■■□ 3.64
Cln6-201ENSMUST00000034776 Cngb1E1AZ71 1325 aa37.75■■■■□ 3.63
Cln6-201ENSMUST00000034776 Atad2bE9Q166 1460 aaKnown RBP37.68■■■■□ 3.62
Cln6-201ENSMUST00000034776 Iqgap2Q3UQ44 1575 aa37.66■■■■□ 3.62
Cln6-201ENSMUST00000034776 Pds5bQ4VA53 1446 aaKnown RBP37.62■■■■□ 3.61
Cln6-201ENSMUST00000034776 Top2bQ64511 1612 aa37.61■■■■□ 3.61
Cln6-201ENSMUST00000034776 Esf1Q3V1V3 845 aaKnown RBP37.6■■■■□ 3.61
Cln6-201ENSMUST00000034776 Rsf1E9PWW9 1441 aaKnown RBP37.58■■■■□ 3.61
Cln6-201ENSMUST00000034776 Chic1Q8CBW7 227 aa37.48■■■■□ 3.59
Cln6-201ENSMUST00000034776 Ccdc88bQ4QRL3 1481 aa37.45■■■■□ 3.59
Cln6-201ENSMUST00000034776 Cc2d2aQ8CFW7 1633 aa37.16■■■■□ 3.54
Cln6-201ENSMUST00000034776 Fmn1Q05860 1466 aa37.04■■■■□ 3.52
Cln6-201ENSMUST00000034776 Wdr62Q3U3T8 1523 aa37.04■■■■□ 3.52
Cln6-201ENSMUST00000034776 Frmpd1A2AKB4 1549 aa37.04■■■■□ 3.52
Cln6-201ENSMUST00000034776 Gab3Q8BSM5 595 aa36.87■■■■□ 3.49
Cln6-201ENSMUST00000034776 Ercc6F8VPZ5 1481 aa36.85■■■■□ 3.49
Cln6-201ENSMUST00000034776 Top2aQ01320 1528 aaKnown RBP36.76■■■■□ 3.48
Cln6-201ENSMUST00000034776 TnnQ80Z71 1560 aa36.71■■■■□ 3.47
Cln6-201ENSMUST00000034776 Ehmt2Q9Z148 1263 aaKnown RBP36.67■■■■□ 3.46
Cln6-201ENSMUST00000034776 Unc13aQ4KUS2 1712 aa36.64■■■■□ 3.46
Cln6-201ENSMUST00000034776 Thoc2B1AZI6 1594 aaKnown RBP36.6■■■■□ 3.45
Cln6-201ENSMUST00000034776 Rpgrip1Q9EPQ2 1331 aa36.56■■■■□ 3.44
Cln6-201ENSMUST00000034776 Lamc3Q9R0B6 1581 aa36.55■■■■□ 3.44
Cln6-201ENSMUST00000034776 Rapgef2Q8CHG7 1496 aa36.48■■■■□ 3.43
Cln6-201ENSMUST00000034776 Acin1Q9JIX8 1338 aaKnown RBP36.47■■■■□ 3.43
Cln6-201ENSMUST00000034776 Phldb1Q6PDH0 1371 aaKnown RBP36.34■■■■□ 3.41
Cln6-201ENSMUST00000034776 Kif15Q6P9L6 1387 aa36.33■■■■□ 3.41
Cln6-201ENSMUST00000034776 Cep162Q6ZQ06 1403 aa36.16■■■■□ 3.38
Cln6-201ENSMUST00000034776 Fam135aQ6NS59 1506 aa36.15■■■■□ 3.38
Cln6-201ENSMUST00000034776 Camsap1A2AHC3 1581 aa36.11■■■■□ 3.37
Cln6-201ENSMUST00000034776 Eif4g1Q6NZJ6 1600 aaKnown RBP36.04■■■■□ 3.36
Cln6-201ENSMUST00000034776 Ubl4bQ9CQ84 188 aa35.98■■■■□ 3.35
Cln6-201ENSMUST00000034776 Ccdc18Q640L5 1455 aa35.96■■■■□ 3.35
Cln6-201ENSMUST00000034776 Npm2Q80W85 207 aa35.93■■■■□ 3.34
Cln6-201ENSMUST00000034776 NrkQ9R0G8 1455 aa35.91■■■■□ 3.34
Cln6-201ENSMUST00000034776 PtprkP35822 1457 aa35.91■■■■□ 3.34
Cln6-201ENSMUST00000034776 Il27Q8K3I6 234 aa35.9■■■■□ 3.34
Cln6-201ENSMUST00000034776 Cux2P70298 1426 aa35.88■■■■□ 3.33
Cln6-201ENSMUST00000034776 Shroom4Q1W617 1475 aa35.82■■■■□ 3.33
Cln6-201ENSMUST00000034776 Grin2bQ01097 1482 aa35.82■■■■□ 3.32
Cln6-201ENSMUST00000034776 Arhgap35Q91YM2 1499 aa35.76■■■■□ 3.32
Cln6-201ENSMUST00000034776 Myt1lP97500 1187 aa35.74■■■■□ 3.31
Cln6-201ENSMUST00000034776 Npm1Q61937 292 aaKnown RBP35.64■■■■□ 3.3
Cln6-201ENSMUST00000034776 Baz1bQ9Z277 1479 aa35.63■■■■□ 3.29
Cln6-201ENSMUST00000034776 Map3k1P53349 1493 aa35.57■■■■□ 3.29
Cln6-201ENSMUST00000034776 LrpprcQ6PB66 1392 aaKnown RBP35.55■■■■□ 3.28
Cln6-201ENSMUST00000034776 Efcab5A0JP43 1406 aa35.49■■■■□ 3.27
Cln6-201ENSMUST00000034776 Mroh2bQ7M6Y6 1581 aa35.48■■■■□ 3.27
Cln6-201ENSMUST00000034776 PogzQ8BZH4 1409 aaKnown RBP35.47■■■■□ 3.27
Cln6-201ENSMUST00000034776 Dnajc5bQ9CQ94 199 aa35.44■■■■□ 3.26
Cln6-201ENSMUST00000034776 Clip1Q922J3 1391 aa35.43■■■■□ 3.26
Cln6-201ENSMUST00000034776 Duox2A2AQ99 1517 aa35.38■■■■□ 3.25
Cln6-201ENSMUST00000034776 Mrc2Q64449 1479 aa35.33■■■■□ 3.25
Cln6-201ENSMUST00000034776 AqrQ8CFQ3 1481 aaKnown RBP35.28■■■■□ 3.24
Cln6-201ENSMUST00000034776 Eea1Q8BL66 1411 aa35.28■■■■□ 3.24
Cln6-201ENSMUST00000034776 Mier1Q5UAK0 511 aa35.26■■■■□ 3.24
Cln6-201ENSMUST00000034776 Dhx29Q6PGC1 1365 aaKnown RBP35.26■■■■□ 3.23
Cln6-201ENSMUST00000034776 Zeb1Q64318 1117 aa35.23■■■■□ 3.23
Cln6-201ENSMUST00000034776 Arap1Q4LDD4 1452 aa35.17■■■■□ 3.22
Cln6-201ENSMUST00000034776 Kif21aQ9QXL2 1672 aa35.17■■■■□ 3.22
Cln6-201ENSMUST00000034776 Setd5Q5XJV7 1441 aa35.14■■■■□ 3.22
Cln6-201ENSMUST00000034776 UbtfP25976 765 aaKnown RBP35.14■■■■□ 3.22
Cln6-201ENSMUST00000034776 Samd9lQ69Z37 1561 aa35.12■■■■□ 3.21
Cln6-201ENSMUST00000034776 Carmil1Q6EDY6 1374 aa35.1■■■■□ 3.21
Cln6-201ENSMUST00000034776 Crocc2F6XLV1 1638 aa35.08■■■■□ 3.21
Cln6-201ENSMUST00000034776 Arhgef5E9Q7D5 1581 aa35.08■■■■□ 3.21
Cln6-201ENSMUST00000034776 Erich3F6QRE9 1637 aa35.06■■■■□ 3.2
Cln6-201ENSMUST00000034776 SynmQ70IV5 1561 aa35.05■■■■□ 3.2
Cln6-201ENSMUST00000034776 Ankrd26Q811D2 1581 aa35.05■■■■□ 3.2
Cln6-201ENSMUST00000034776 Plekhg3Q4VAC9 1341 aa35.02■■■■□ 3.2
Cln6-201ENSMUST00000034776 NefmP08553 848 aa34.95■■■■□ 3.19
Cln6-201ENSMUST00000034776 Cux1P53564 1515 aa34.9■■■■□ 3.18
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms