RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 NischQ80TM9 1593 aa46,84■■■■■ 5,09
Cln6-201ENSMUST00000034776 Gm35339A0A140LHH9 1649 aa46,55■■■■■ 5,04
Cln6-201ENSMUST00000034776 Abcc9P70170 1546 aa45,5■■■■■ 4,87
Cln6-201ENSMUST00000034776 Abcc8B2RUS7 1588 aa44,73■■■■■ 4,75
Cln6-201ENSMUST00000034776 Rhox8Q6VSS7 320 aa42,39■■■■■ 4,38
Cln6-201ENSMUST00000034776 ScribQ80U72 1612 aa42,04■■■■■ 4,32
Cln6-201ENSMUST00000034776 Dcaf1Q80TR8 1506 aa41,71■■■■■ 4,27
Cln6-201ENSMUST00000034776 Rtl1Q7M732 1744 aa41,46■■■■■ 4,23
Cln6-201ENSMUST00000034776 Kdm5dQ62240 1548 aa41,07■■■■■ 4,17
Cln6-201ENSMUST00000034776 Rb1cc1Q9ESK9 1588 aa40,96■■■■■ 4,15
Cln6-201ENSMUST00000034776 NacadQ5SWP3 1504 aa40,89■■■■■ 4,14
Cln6-201ENSMUST00000034776 Ccdc180J3QNE4 1664 aa40,71■■■■■ 4,11
Cln6-201ENSMUST00000034776 Baz1aO88379 1555 aa40,52■■■■■ 4,08
Cln6-201ENSMUST00000034776 Zcchc6Q5BLK4 1491 aaKnown RBP40,17■■■■■ 4,02
Cln6-201ENSMUST00000034776 Crybg2B7ZCC2 1516 aa40,07■■■■■ 4
Cln6-201ENSMUST00000034776 Sycp2Q9CUU3 1500 aa40,03■■■■■ 4
Cln6-201ENSMUST00000034776 Smarca2Q6DIC0 1577 aa39,55■■■■□ 3,92
Cln6-201ENSMUST00000034776 Ccdc136Q3TVA9 1136 aa39,42■■■■□ 3,9
Cln6-201ENSMUST00000034776 BicraF8VPZ9 1578 aa39,22■■■■□ 3,87
Cln6-201ENSMUST00000034776 Trim41Q5NCC3 630 aa38,83■■■■□ 3,81
Cln6-201ENSMUST00000034776 HrcG5E8J6 738 aa38,73■■■■□ 3,79
Cln6-201ENSMUST00000034776 Cecr2E9Q2Z1 1453 aa38,71■■■■□ 3,79
Cln6-201ENSMUST00000034776 Brd4Q9ESU6 1400 aaKnown RBP38,52■■■■□ 3,76
Cln6-201ENSMUST00000034776 Synj1Q8CHC4 1574 aa38,26■■■■□ 3,72
Cln6-201ENSMUST00000034776 CftrP26361 1476 aa38,14■■■■□ 3,7
Cln6-201ENSMUST00000034776 Smarca4Q3TKT4 1613 aaKnown RBP38,12■■■■□ 3,69
Cln6-201ENSMUST00000034776 Cttnbp2B9EJA2 1648 aa37,98■■■■□ 3,67
Cln6-201ENSMUST00000034776 Golga3P55937 1487 aa37,89■■■■□ 3,66
Cln6-201ENSMUST00000034776 Cep164Q5DU05 1446 aa37,79■■■■□ 3,64
Cln6-201ENSMUST00000034776 Cngb1E1AZ71 1325 aa37,75■■■■□ 3,63
Cln6-201ENSMUST00000034776 Atad2bE9Q166 1460 aaKnown RBP37,68■■■■□ 3,62
Cln6-201ENSMUST00000034776 Iqgap2Q3UQ44 1575 aa37,66■■■■□ 3,62
Cln6-201ENSMUST00000034776 Pds5bQ4VA53 1446 aaKnown RBP37,62■■■■□ 3,61
Cln6-201ENSMUST00000034776 Top2bQ64511 1612 aa37,61■■■■□ 3,61
Cln6-201ENSMUST00000034776 Esf1Q3V1V3 845 aaKnown RBP37,6■■■■□ 3,61
Cln6-201ENSMUST00000034776 Rsf1E9PWW9 1441 aaKnown RBP37,58■■■■□ 3,61
Cln6-201ENSMUST00000034776 Chic1Q8CBW7 227 aa37,48■■■■□ 3,59
Cln6-201ENSMUST00000034776 Ccdc88bQ4QRL3 1481 aa37,45■■■■□ 3,59
Cln6-201ENSMUST00000034776 Cc2d2aQ8CFW7 1633 aa37,16■■■■□ 3,54
Cln6-201ENSMUST00000034776 Fmn1Q05860 1466 aa37,04■■■■□ 3,52
Cln6-201ENSMUST00000034776 Wdr62Q3U3T8 1523 aa37,04■■■■□ 3,52
Cln6-201ENSMUST00000034776 Frmpd1A2AKB4 1549 aa37,04■■■■□ 3,52
Cln6-201ENSMUST00000034776 Gab3Q8BSM5 595 aa36,87■■■■□ 3,49
Cln6-201ENSMUST00000034776 Ercc6F8VPZ5 1481 aa36,85■■■■□ 3,49
Cln6-201ENSMUST00000034776 Top2aQ01320 1528 aaKnown RBP36,76■■■■□ 3,48
Cln6-201ENSMUST00000034776 TnnQ80Z71 1560 aa36,71■■■■□ 3,47
Cln6-201ENSMUST00000034776 Ehmt2Q9Z148 1263 aaKnown RBP36,67■■■■□ 3,46
Cln6-201ENSMUST00000034776 Unc13aQ4KUS2 1712 aa36,64■■■■□ 3,46
Cln6-201ENSMUST00000034776 Thoc2B1AZI6 1594 aaKnown RBP36,6■■■■□ 3,45
Cln6-201ENSMUST00000034776 Rpgrip1Q9EPQ2 1331 aa36,56■■■■□ 3,44
Cln6-201ENSMUST00000034776 Lamc3Q9R0B6 1581 aa36,55■■■■□ 3,44
Cln6-201ENSMUST00000034776 Rapgef2Q8CHG7 1496 aa36,48■■■■□ 3,43
Cln6-201ENSMUST00000034776 Acin1Q9JIX8 1338 aaKnown RBP36,47■■■■□ 3,43
Cln6-201ENSMUST00000034776 Phldb1Q6PDH0 1371 aaKnown RBP36,34■■■■□ 3,41
Cln6-201ENSMUST00000034776 Kif15Q6P9L6 1387 aa36,33■■■■□ 3,41
Cln6-201ENSMUST00000034776 Cep162Q6ZQ06 1403 aa36,16■■■■□ 3,38
Cln6-201ENSMUST00000034776 Fam135aQ6NS59 1506 aa36,15■■■■□ 3,38
Cln6-201ENSMUST00000034776 Camsap1A2AHC3 1581 aa36,11■■■■□ 3,37
Cln6-201ENSMUST00000034776 Eif4g1Q6NZJ6 1600 aaKnown RBP36,04■■■■□ 3,36
Cln6-201ENSMUST00000034776 Ubl4bQ9CQ84 188 aa35,98■■■■□ 3,35
Cln6-201ENSMUST00000034776 Ccdc18Q640L5 1455 aa35,96■■■■□ 3,35
Cln6-201ENSMUST00000034776 Npm2Q80W85 207 aa35,93■■■■□ 3,34
Cln6-201ENSMUST00000034776 NrkQ9R0G8 1455 aa35,91■■■■□ 3,34
Cln6-201ENSMUST00000034776 PtprkP35822 1457 aa35,91■■■■□ 3,34
Cln6-201ENSMUST00000034776 Il27Q8K3I6 234 aa35,9■■■■□ 3,34
Cln6-201ENSMUST00000034776 Cux2P70298 1426 aa35,88■■■■□ 3,33
Cln6-201ENSMUST00000034776 Shroom4Q1W617 1475 aa35,82■■■■□ 3,33
Cln6-201ENSMUST00000034776 Grin2bQ01097 1482 aa35,82■■■■□ 3,32
Cln6-201ENSMUST00000034776 Arhgap35Q91YM2 1499 aa35,76■■■■□ 3,32
Cln6-201ENSMUST00000034776 Myt1lP97500 1187 aa35,74■■■■□ 3,31
Cln6-201ENSMUST00000034776 Npm1Q61937 292 aaKnown RBP35,64■■■■□ 3,3
Cln6-201ENSMUST00000034776 Baz1bQ9Z277 1479 aa35,63■■■■□ 3,29
Cln6-201ENSMUST00000034776 Map3k1P53349 1493 aa35,57■■■■□ 3,29
Cln6-201ENSMUST00000034776 LrpprcQ6PB66 1392 aaKnown RBP35,55■■■■□ 3,28
Cln6-201ENSMUST00000034776 Efcab5A0JP43 1406 aa35,49■■■■□ 3,27
Cln6-201ENSMUST00000034776 Mroh2bQ7M6Y6 1581 aa35,48■■■■□ 3,27
Cln6-201ENSMUST00000034776 PogzQ8BZH4 1409 aaKnown RBP35,47■■■■□ 3,27
Cln6-201ENSMUST00000034776 Dnajc5bQ9CQ94 199 aa35,44■■■■□ 3,26
Cln6-201ENSMUST00000034776 Clip1Q922J3 1391 aa35,43■■■■□ 3,26
Cln6-201ENSMUST00000034776 Duox2A2AQ99 1517 aa35,38■■■■□ 3,25
Cln6-201ENSMUST00000034776 Mrc2Q64449 1479 aa35,33■■■■□ 3,25
Cln6-201ENSMUST00000034776 AqrQ8CFQ3 1481 aaKnown RBP35,28■■■■□ 3,24
Cln6-201ENSMUST00000034776 Eea1Q8BL66 1411 aa35,28■■■■□ 3,24
Cln6-201ENSMUST00000034776 Mier1Q5UAK0 511 aa35,26■■■■□ 3,24
Cln6-201ENSMUST00000034776 Dhx29Q6PGC1 1365 aaKnown RBP35,26■■■■□ 3,23
Cln6-201ENSMUST00000034776 Zeb1Q64318 1117 aa35,23■■■■□ 3,23
Cln6-201ENSMUST00000034776 Arap1Q4LDD4 1452 aa35,17■■■■□ 3,22
Cln6-201ENSMUST00000034776 Kif21aQ9QXL2 1672 aa35,17■■■■□ 3,22
Cln6-201ENSMUST00000034776 Setd5Q5XJV7 1441 aa35,14■■■■□ 3,22
Cln6-201ENSMUST00000034776 UbtfP25976 765 aaKnown RBP35,14■■■■□ 3,22
Cln6-201ENSMUST00000034776 Samd9lQ69Z37 1561 aa35,12■■■■□ 3,21
Cln6-201ENSMUST00000034776 Carmil1Q6EDY6 1374 aa35,1■■■■□ 3,21
Cln6-201ENSMUST00000034776 Crocc2F6XLV1 1638 aa35,08■■■■□ 3,21
Cln6-201ENSMUST00000034776 Arhgef5E9Q7D5 1581 aa35,08■■■■□ 3,21
Cln6-201ENSMUST00000034776 Erich3F6QRE9 1637 aa35,06■■■■□ 3,2
Cln6-201ENSMUST00000034776 SynmQ70IV5 1561 aa35,05■■■■□ 3,2
Cln6-201ENSMUST00000034776 Ankrd26Q811D2 1581 aa35,05■■■■□ 3,2
Cln6-201ENSMUST00000034776 Plekhg3Q4VAC9 1341 aa35,02■■■■□ 3,2
Cln6-201ENSMUST00000034776 NefmP08553 848 aa34,95■■■■□ 3,19
Cln6-201ENSMUST00000034776 Cux1P53564 1515 aa34,9■■■■□ 3,18
Retrieved 100 of 22,080 RNA–protein pairs in 37,1 ms