Protein–RNA interactions for Protein: A0A087WQJ0

Scgb1b11, ABPA11_a18, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb1b11A0A087WQJ0 Gm25239-201ENSMUST00000174915 86 ntBASIC25■■□□□ 1,59
Scgb1b11A0A087WQJ0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24,84■■□□□ 1,57
Scgb1b11A0A087WQJ0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
Scgb1b11A0A087WQJ0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24,22■■□□□ 1,47
Scgb1b11A0A087WQJ0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23,75■■□□□ 1,39
Scgb1b11A0A087WQJ0 Psd-208ENSMUST00000224556 2034 ntBASIC23,6■■□□□ 1,37
Scgb1b11A0A087WQJ0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23,3■■□□□ 1,32
Scgb1b11A0A087WQJ0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23,01■■□□□ 1,27
Scgb1b11A0A087WQJ0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22,88■■□□□ 1,25
Scgb1b11A0A087WQJ0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22,72■■□□□ 1,23
Scgb1b11A0A087WQJ0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22,66■■□□□ 1,22
Scgb1b11A0A087WQJ0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22,54■■□□□ 1,2
Scgb1b11A0A087WQJ0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22,52■■□□□ 1,2
Scgb1b11A0A087WQJ0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22,51■■□□□ 1,19
Scgb1b11A0A087WQJ0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22,47■■□□□ 1,19
Scgb1b11A0A087WQJ0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Scgb1b11A0A087WQJ0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22,36■■□□□ 1,17
Scgb1b11A0A087WQJ0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22,22■■□□□ 1,15
Scgb1b11A0A087WQJ0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,15■■□□□ 1,14
Scgb1b11A0A087WQJ0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22,14■■□□□ 1,14
Scgb1b11A0A087WQJ0 Gm15042-201ENSMUST00000120212 883 ntBASIC22,1■■□□□ 1,13
Scgb1b11A0A087WQJ0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,07■■□□□ 1,12
Scgb1b11A0A087WQJ0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22,07■■□□□ 1,12
Scgb1b11A0A087WQJ0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22,03■■□□□ 1,12
Scgb1b11A0A087WQJ0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
Scgb1b11A0A087WQJ0 Gm42596-201ENSMUST00000196305 1958 ntBASIC21,97■■□□□ 1,11
Scgb1b11A0A087WQJ0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21,84■■□□□ 1,09
Scgb1b11A0A087WQJ0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,66■■□□□ 1,06
Scgb1b11A0A087WQJ0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
Scgb1b11A0A087WQJ0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21,63■■□□□ 1,05
Scgb1b11A0A087WQJ0 Gm24109-201ENSMUST00000175489 103 ntBASIC21,54■■□□□ 1,04
Scgb1b11A0A087WQJ0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21,52■■□□□ 1,03
Scgb1b11A0A087WQJ0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21,51■■□□□ 1,03
Scgb1b11A0A087WQJ0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21,5■■□□□ 1,03
Scgb1b11A0A087WQJ0 Gm15045-201ENSMUST00000117359 883 ntBASIC21,5■■□□□ 1,03
Scgb1b11A0A087WQJ0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21,48■■□□□ 1,03
Scgb1b11A0A087WQJ0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21,4■■□□□ 1,02
Scgb1b11A0A087WQJ0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21,32■■□□□ 1
Scgb1b11A0A087WQJ0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21,29■■□□□ 1
Scgb1b11A0A087WQJ0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21,27■□□□□ 0,99
Scgb1b11A0A087WQJ0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21,26■□□□□ 0,99
Scgb1b11A0A087WQJ0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,15■□□□□ 0,98
Scgb1b11A0A087WQJ0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21,11■□□□□ 0,97
Scgb1b11A0A087WQJ0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21,11■□□□□ 0,97
Scgb1b11A0A087WQJ0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21,1■□□□□ 0,97
Scgb1b11A0A087WQJ0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21,1■□□□□ 0,97
Scgb1b11A0A087WQJ0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21,08■□□□□ 0,96
Scgb1b11A0A087WQJ0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,06■□□□□ 0,96
Scgb1b11A0A087WQJ0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21,05■□□□□ 0,96
Scgb1b11A0A087WQJ0 Gm23366-201ENSMUST00000175022 89 ntBASIC21,04■□□□□ 0,96
Scgb1b11A0A087WQJ0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Scgb1b11A0A087WQJ0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20,97■□□□□ 0,95
Scgb1b11A0A087WQJ0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,96■□□□□ 0,95
Scgb1b11A0A087WQJ0 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20,94■□□□□ 0,94
Scgb1b11A0A087WQJ0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Scgb1b11A0A087WQJ0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Scgb1b11A0A087WQJ0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,9■□□□□ 0,94
Scgb1b11A0A087WQJ0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20,89■□□□□ 0,94
Scgb1b11A0A087WQJ0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20,86■□□□□ 0,93
Scgb1b11A0A087WQJ0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,93
Scgb1b11A0A087WQJ0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,75■□□□□ 0,91
Scgb1b11A0A087WQJ0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20,71■□□□□ 0,91
Scgb1b11A0A087WQJ0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20,68■□□□□ 0,9
Scgb1b11A0A087WQJ0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20,68■□□□□ 0,9
Scgb1b11A0A087WQJ0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,65■□□□□ 0,9
Scgb1b11A0A087WQJ0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20,64■□□□□ 0,89
Scgb1b11A0A087WQJ0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20,64■□□□□ 0,89
Scgb1b11A0A087WQJ0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20,58■□□□□ 0,89
Scgb1b11A0A087WQJ0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20,56■□□□□ 0,88
Scgb1b11A0A087WQJ0 Zxda-201ENSMUST00000117281 2621 ntBASIC20,54■□□□□ 0,88
Scgb1b11A0A087WQJ0 Gm10524-201ENSMUST00000181931 1893 ntBASIC20,53■□□□□ 0,88
Scgb1b11A0A087WQJ0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,53■□□□□ 0,88
Scgb1b11A0A087WQJ0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Scgb1b11A0A087WQJ0 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20,48■□□□□ 0,87
Scgb1b11A0A087WQJ0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC20,47■□□□□ 0,87
Scgb1b11A0A087WQJ0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20,46■□□□□ 0,87
Scgb1b11A0A087WQJ0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20,45■□□□□ 0,86
Scgb1b11A0A087WQJ0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20,43■□□□□ 0,86
Scgb1b11A0A087WQJ0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20,42■□□□□ 0,86
Scgb1b11A0A087WQJ0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20,37■□□□□ 0,85
Scgb1b11A0A087WQJ0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20,35■□□□□ 0,85
Scgb1b11A0A087WQJ0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20,34■□□□□ 0,85
Scgb1b11A0A087WQJ0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20,33■□□□□ 0,85
Scgb1b11A0A087WQJ0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20,33■□□□□ 0,85
Scgb1b11A0A087WQJ0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20,32■□□□□ 0,84
Scgb1b11A0A087WQJ0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20,32■□□□□ 0,84
Scgb1b11A0A087WQJ0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20,31■□□□□ 0,84
Scgb1b11A0A087WQJ0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20,27■□□□□ 0,84
Scgb1b11A0A087WQJ0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20,25■□□□□ 0,83
Scgb1b11A0A087WQJ0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20,23■□□□□ 0,83
Scgb1b11A0A087WQJ0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20,23■□□□□ 0,83
Scgb1b11A0A087WQJ0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20,22■□□□□ 0,83
Scgb1b11A0A087WQJ0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC20,21■□□□□ 0,83
Scgb1b11A0A087WQJ0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20,21■□□□□ 0,83
Scgb1b11A0A087WQJ0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20,19■□□□□ 0,82
Scgb1b11A0A087WQJ0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20,19■□□□□ 0,82
Scgb1b11A0A087WQJ0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20,18■□□□□ 0,82
Scgb1b11A0A087WQJ0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20,18■□□□□ 0,82
Scgb1b11A0A087WQJ0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20,12■□□□□ 0,81
Scgb1b11A0A087WQJ0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20,11■□□□□ 0,81
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms