Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 Gm25239-201ENSMUST00000174915 86 ntBASIC29,56■■■□□ 2,32
Nhlrc1Q8BR37 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27,33■■□□□ 1,97
Nhlrc1Q8BR37 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC27,06■■□□□ 1,92
Nhlrc1Q8BR37 Gm15042-201ENSMUST00000120212 883 ntBASIC25,82■■□□□ 1,72
Nhlrc1Q8BR37 Gm24109-201ENSMUST00000175489 103 ntBASIC25,59■■□□□ 1,69
Nhlrc1Q8BR37 Gm15045-201ENSMUST00000117359 883 ntBASIC25,18■■□□□ 1,62
Nhlrc1Q8BR37 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Nhlrc1Q8BR37 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Nhlrc1Q8BR37 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Nhlrc1Q8BR37 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24,8■■□□□ 1,56
Nhlrc1Q8BR37 Gm23366-201ENSMUST00000175022 89 ntBASIC24,76■■□□□ 1,55
Nhlrc1Q8BR37 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Nhlrc1Q8BR37 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Nhlrc1Q8BR37 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24,14■■□□□ 1,45
Nhlrc1Q8BR37 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24,13■■□□□ 1,45
Nhlrc1Q8BR37 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC23,92■■□□□ 1,42
Nhlrc1Q8BR37 AC153911.1-202ENSMUST00000218534 1034 ntBASIC23,88■■□□□ 1,41
Nhlrc1Q8BR37 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,7■■□□□ 1,38
Nhlrc1Q8BR37 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23,69■■□□□ 1,38
Nhlrc1Q8BR37 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23,67■■□□□ 1,38
Nhlrc1Q8BR37 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23,67■■□□□ 1,38
Nhlrc1Q8BR37 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23,64■■□□□ 1,38
Nhlrc1Q8BR37 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
Nhlrc1Q8BR37 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,55■■□□□ 1,36
Nhlrc1Q8BR37 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Nhlrc1Q8BR37 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23,48■■□□□ 1,35
Nhlrc1Q8BR37 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23,46■■□□□ 1,35
Nhlrc1Q8BR37 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23,45■■□□□ 1,34
Nhlrc1Q8BR37 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC23,35■■□□□ 1,33
Nhlrc1Q8BR37 Gm25238-201ENSMUST00000174914 89 ntBASIC23,32■■□□□ 1,32
Nhlrc1Q8BR37 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,29■■□□□ 1,32
Nhlrc1Q8BR37 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23,28■■□□□ 1,32
Nhlrc1Q8BR37 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23,25■■□□□ 1,31
Nhlrc1Q8BR37 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,23■■□□□ 1,31
Nhlrc1Q8BR37 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23,04■■□□□ 1,28
Nhlrc1Q8BR37 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23,01■■□□□ 1,27
Nhlrc1Q8BR37 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22,93■■□□□ 1,26
Nhlrc1Q8BR37 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22,85■■□□□ 1,25
Nhlrc1Q8BR37 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22,8■■□□□ 1,24
Nhlrc1Q8BR37 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22,79■■□□□ 1,24
Nhlrc1Q8BR37 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,78■■□□□ 1,24
Nhlrc1Q8BR37 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,76■■□□□ 1,23
Nhlrc1Q8BR37 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,75■■□□□ 1,23
Nhlrc1Q8BR37 Psd-208ENSMUST00000224556 2034 ntBASIC22,73■■□□□ 1,23
Nhlrc1Q8BR37 Gm27325-201ENSMUST00000175467 74 ntBASIC22,63■■□□□ 1,21
Nhlrc1Q8BR37 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,57■■□□□ 1,2
Nhlrc1Q8BR37 Gm25262-201ENSMUST00000174934 133 ntBASIC22,48■■□□□ 1,19
Nhlrc1Q8BR37 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22,46■■□□□ 1,19
Nhlrc1Q8BR37 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22,43■■□□□ 1,18
Nhlrc1Q8BR37 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Nhlrc1Q8BR37 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22,43■■□□□ 1,18
Nhlrc1Q8BR37 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22,43■■□□□ 1,18
Nhlrc1Q8BR37 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Nhlrc1Q8BR37 Rab21-202ENSMUST00000218831 843 ntBASIC22,28■■□□□ 1,16
Nhlrc1Q8BR37 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Nhlrc1Q8BR37 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,25■■□□□ 1,15
Nhlrc1Q8BR37 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22,25■■□□□ 1,15
Nhlrc1Q8BR37 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22,23■■□□□ 1,15
Nhlrc1Q8BR37 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22,18■■□□□ 1,14
Nhlrc1Q8BR37 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,1■■□□□ 1,13
Nhlrc1Q8BR37 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22,08■■□□□ 1,12
Nhlrc1Q8BR37 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22,07■■□□□ 1,12
Nhlrc1Q8BR37 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22■■□□□ 1,11
Nhlrc1Q8BR37 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21,99■■□□□ 1,11
Nhlrc1Q8BR37 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21,97■■□□□ 1,11
Nhlrc1Q8BR37 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21,96■■□□□ 1,11
Nhlrc1Q8BR37 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21,96■■□□□ 1,11
Nhlrc1Q8BR37 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC21,94■■□□□ 1,1
Nhlrc1Q8BR37 Gm26115-201ENSMUST00000175605 87 ntBASIC21,93■■□□□ 1,1
Nhlrc1Q8BR37 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC21,91■■□□□ 1,1
Nhlrc1Q8BR37 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC21,89■■□□□ 1,1
Nhlrc1Q8BR37 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21,88■■□□□ 1,09
Nhlrc1Q8BR37 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21,87■■□□□ 1,09
Nhlrc1Q8BR37 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21,87■■□□□ 1,09
Nhlrc1Q8BR37 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21,85■■□□□ 1,09
Nhlrc1Q8BR37 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21,85■■□□□ 1,09
Nhlrc1Q8BR37 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21,82■■□□□ 1,08
Nhlrc1Q8BR37 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21,82■■□□□ 1,08
Nhlrc1Q8BR37 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21,81■■□□□ 1,08
Nhlrc1Q8BR37 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21,8■■□□□ 1,08
Nhlrc1Q8BR37 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21,78■■□□□ 1,08
Nhlrc1Q8BR37 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21,75■■□□□ 1,07
Nhlrc1Q8BR37 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21,73■■□□□ 1,07
Nhlrc1Q8BR37 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC21,72■■□□□ 1,07
Nhlrc1Q8BR37 Gm8109-201ENSMUST00000194076 746 ntBASIC21,71■■□□□ 1,07
Nhlrc1Q8BR37 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21,69■■□□□ 1,06
Nhlrc1Q8BR37 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC21,68■■□□□ 1,06
Nhlrc1Q8BR37 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Nhlrc1Q8BR37 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21,66■■□□□ 1,06
Nhlrc1Q8BR37 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21,65■■□□□ 1,06
Nhlrc1Q8BR37 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21,64■■□□□ 1,05
Nhlrc1Q8BR37 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,63■■□□□ 1,05
Nhlrc1Q8BR37 Gm10524-201ENSMUST00000181931 1893 ntBASIC21,62■■□□□ 1,05
Nhlrc1Q8BR37 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21,59■■□□□ 1,05
Nhlrc1Q8BR37 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Nhlrc1Q8BR37 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Nhlrc1Q8BR37 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Nhlrc1Q8BR37 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC21,5■■□□□ 1,03
Nhlrc1Q8BR37 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21,49■■□□□ 1,03
Nhlrc1Q8BR37 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,46■■□□□ 1,03
Retrieved 100 of 76,532 protein–RNA pairs in 11,8 ms