RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	KHA1	P40309	873 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	RIC1	P40395	1056 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	YJL163C	P46996	555 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	STP3	Q05937	343 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	IZH3	Q07959	543 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	ERP4	Q12450	207 aa		4.17	□□□□□ -1.74
CAF20	YOR276W	YLR302C	O13544	120 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	MET8	P15807	274 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	PRP45	P28004	379 aa	Predicted RBP	4.16	□□□□□ -1.74
CAF20	YOR276W	MRPL7	P36519	292 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	CTP1	P38152	299 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
CAF20	YOR276W	BSC5	P53755	489 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	TIM10	P87108	93 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	YPL108W	Q02872	168 aa	Predicted RBP	4.16	□□□□□ -1.74
CAF20	YOR276W	IMH1	Q06704	911 aa	Known RBP	4.16	□□□□□ -1.74
CAF20	YOR276W	MLH3	Q12083	715 aa		4.16	□□□□□ -1.74
CAF20	YOR276W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
CAF20	YOR276W	ATP2	P00830	511 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-LR1	P0C2J4	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-F	P0CX61	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-GR2	P0CX62	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	MRP7	P12687	371 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	THR1	P17423	357 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-C	P25383	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	FUB1	P25659	250 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	GCD7	P32502	381 aa	Predicted RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	NFU1	P32860	256 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	DHR2	P36009	735 aa	Predicted RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	YHR097C	P38809	366 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	YJR061W	P40355	935 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	IST3	P40565	148 aa	Predicted RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	FHN1	P53279	174 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	YAP1802	P53309	568 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	MDG1	P53885	366 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	REG1	Q00816	1014 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	LGE1	Q02796	332 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-DR2	Q03483	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	EFR3	Q03653	782 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	TDA9	Q04545	1251 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	CRF1	Q04930	467 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	VAM6	Q07468	1049 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	USV1	Q12132	391 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-B	Q12260	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-OR2	Q12293	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-DR1	Q12392	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-OR1	Q12439	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	PNO1	Q99216	274 aa	Known RBP	4.15	□□□□□ -1.75
CAF20	YOR276W	TY2A-DR3	Q99303	438 aa		4.15	□□□□□ -1.75
CAF20	YOR276W	SEM1	O94742	89 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	SIR3	P06701	978 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	VPS34	P22543	875 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	MRP20	P32387	263 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	NUP120	P35729	1037 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	PSD1	P39006	500 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	FMP52	P40008	231 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	SKP2	P42843	763 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	MRH1	Q12117	320 aa	Predicted RBP	4.14	□□□□□ -1.75
CAF20	YOR276W	SKM1	Q12469	655 aa		4.14	□□□□□ -1.75
CAF20	YOR276W	YCR061W	P25639	631 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	CMK1	P27466	446 aa	Known RBP	4.13	□□□□□ -1.75
CAF20	YOR276W	SWC3	P31376	625 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	ESL2	P36168	1195 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	FMP10	P40098	244 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	VTC2	P43585	828 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	NMA2	P53204	395 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	YGR151C	P53287	111 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	DIP5	P53388	608 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	CSL4	P53859	292 aa	Predicted RBP	4.13	□□□□□ -1.75
CAF20	YOR276W	MFM1	Q02783	413 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	SPC19	Q03954	165 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	YSH1	Q06224	779 aa	Predicted RBP	4.13	□□□□□ -1.75
CAF20	YOR276W	VIP1	Q06685	1146 aa	Known RBP	4.13	□□□□□ -1.75
CAF20	YOR276W	TMA16	Q08687	178 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	NBP2	Q12163	236 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	TAH18	Q12181	623 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	NDJ1	Q12366	352 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	YOR111W	Q99210	232 aa		4.13	□□□□□ -1.75
CAF20	YOR276W	CAP1	P28495	268 aa	Known RBP	4.12	□□□□□ -1.75
CAF20	YOR276W	DUO1	P53168	247 aa	Known RBP	4.12	□□□□□ -1.75
CAF20	YOR276W	MRPL19	P53875	158 aa		4.12	□□□□□ -1.75
CAF20	YOR276W	YKU80	Q04437	629 aa		4.12	□□□□□ -1.75
CAF20	YOR276W	ENT4	Q07872	247 aa		4.12	□□□□□ -1.75
CAF20	YOR276W	RVB2	Q12464	471 aa	Known RBP	4.12	□□□□□ -1.75
CAF20	YOR276W	RPB2	P08518	1224 aa	Known RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	SUI3	P09064	285 aa	Known RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	CDC24	P11433	854 aa	Predicted RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	ABF1	P14164	731 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	ERG8	P24521	451 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	SGF29	P25554	259 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	PGS1	P25578	521 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	KTR3	P38130	404 aa	Predicted RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	KSP1	P38691	1029 aa	Known RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	ARO9	P38840	513 aa	Predicted RBP	4.11	□□□□□ -1.75
CAF20	YOR276W	LNP1	P38878	278 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	SIP4	P46954	829 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	SNF12	P53628	566 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	RIA1	P53893	1110 aa		4.11	□□□□□ -1.75
CAF20	YOR276W	YSA1	Q01976	231 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms