RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C APC5Q08683 685 aa3.92□□□□□ -1.78
SGN1YIR001C RTK1Q12100 620 aaPredicted RBP3.92□□□□□ -1.78
SGN1YIR001C MCD1Q12158 566 aa3.92□□□□□ -1.78
SGN1YIR001C CDC42P19073 191 aa3.91□□□□□ -1.78
SGN1YIR001C ARF2P19146 181 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C NFS1P25374 497 aa3.91□□□□□ -1.78
SGN1YIR001C SAC6P32599 642 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C PDR3P33200 976 aa3.91□□□□□ -1.78
SGN1YIR001C YBR053CP38235 358 aa3.91□□□□□ -1.78
SGN1YIR001C LEU5P38702 357 aa3.91□□□□□ -1.78
SGN1YIR001C OCA5P38738 679 aa3.91□□□□□ -1.78
SGN1YIR001C CTM1P38818 585 aa3.91□□□□□ -1.78
SGN1YIR001C DUN1P39009 513 aa3.91□□□□□ -1.78
SGN1YIR001C YAR028WP39548 234 aa3.91□□□□□ -1.78
SGN1YIR001C YPS6P40583 537 aa3.91□□□□□ -1.78
SGN1YIR001C COS5P47187 383 aa3.91□□□□□ -1.78
SGN1YIR001C PYK2P52489 506 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C NUP84P52891 726 aa3.91□□□□□ -1.78
SGN1YIR001C MND1P53102 219 aa3.91□□□□□ -1.78
SGN1YIR001C FLC3P53121 802 aa3.91□□□□□ -1.78
SGN1YIR001C DRN1P53255 507 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C TDA7P53882 636 aaPredicted RBP3.91□□□□□ -1.78
SGN1YIR001C UTP5Q04177 643 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C RTN1Q04947 295 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C HRK1Q08732 759 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C TRE1Q08919 783 aa3.91□□□□□ -1.78
SGN1YIR001C ALG6Q12001 544 aaKnown RBP3.91□□□□□ -1.78
SGN1YIR001C SVS1Q12254 260 aa3.91□□□□□ -1.78
SGN1YIR001C JIP3O13555 125 aa3.9□□□□□ -1.79
SGN1YIR001C SEC23P15303 768 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C SNF5P18480 905 aa3.9□□□□□ -1.79
SGN1YIR001C CAP1P28495 268 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C PMI40P29952 429 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C RML2P32611 393 aa3.9□□□□□ -1.79
SGN1YIR001C ECM13P38195 257 aa3.9□□□□□ -1.79
SGN1YIR001C YBR238CP38330 731 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C SLS1P42900 643 aa3.9□□□□□ -1.79
SGN1YIR001C YJR079WP47126 109 aa3.9□□□□□ -1.79
SGN1YIR001C VEL1P53058 206 aa3.9□□□□□ -1.79
SGN1YIR001C COP1P53622 1201 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C ELA1P53861 379 aaPredicted RBP3.9□□□□□ -1.79
SGN1YIR001C YMR206WQ03695 313 aa3.9□□□□□ -1.79
SGN1YIR001C SPG3Q04398 127 aaPredicted RBP3.9□□□□□ -1.79
SGN1YIR001C HRD3Q05787 833 aa3.9□□□□□ -1.79
SGN1YIR001C ECM38Q05902 660 aaPredicted RBP3.9□□□□□ -1.79
SGN1YIR001C YSH1Q06224 779 aaPredicted RBP3.9□□□□□ -1.79
SGN1YIR001C CLP1Q08685 445 aaPredicted RBP3.9□□□□□ -1.79
SGN1YIR001C RPN8Q08723 338 aaKnown RBP3.9□□□□□ -1.79
SGN1YIR001C ARP7Q12406 477 aa3.9□□□□□ -1.79
SGN1YIR001C IRA1P18963 3092 aa3.89□□□□□ -1.79
SGN1YIR001C BIK1P11709 440 aa3.89□□□□□ -1.79
SGN1YIR001C AEP2P22136 580 aa3.89□□□□□ -1.79
SGN1YIR001C SAT4P25333 603 aaKnown RBP3.89□□□□□ -1.79
SGN1YIR001C PUF4P25339 888 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
SGN1YIR001C SFP1P32432 683 aa3.89□□□□□ -1.79
SGN1YIR001C MRPS18P42847 217 aa3.89□□□□□ -1.79
SGN1YIR001C BST1P43571 1029 aa3.89□□□□□ -1.79
SGN1YIR001C IML2P47031 731 aa3.89□□□□□ -1.79
SGN1YIR001C HFM1P51979 1187 aa3.89□□□□□ -1.79
SGN1YIR001C NPY1P53164 384 aa3.89□□□□□ -1.79
SGN1YIR001C TAF9Q05027 157 aa3.89□□□□□ -1.79
SGN1YIR001C SPP382Q06411 708 aaPredicted RBP3.89□□□□□ -1.79
SGN1YIR001C MDM38Q08179 573 aa3.89□□□□□ -1.79
SGN1YIR001C FAL1Q12099 399 aaKnown RBP3.89□□□□□ -1.79
SGN1YIR001C ECM3Q99252 613 aa3.89□□□□□ -1.79
SGN1YIR001C COX3P00420 269 aa3.88□□□□□ -1.79
SGN1YIR001C DAL2P25335 343 aa3.88□□□□□ -1.79
SGN1YIR001C SEC6P32844 805 aa3.88□□□□□ -1.79
SGN1YIR001C CSG2P35206 410 aa3.88□□□□□ -1.79
SGN1YIR001C ADD66P36040 267 aa3.88□□□□□ -1.79
SGN1YIR001C YMC2P38087 329 aa3.88□□□□□ -1.79
SGN1YIR001C RFT1P38206 574 aaPredicted RBP3.88□□□□□ -1.79
SGN1YIR001C YHR078WP38799 552 aa3.88□□□□□ -1.79
SGN1YIR001C CRP1P38845 465 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C SAK1P38990 1142 aa3.88□□□□□ -1.79
SGN1YIR001C EXO1P39875 702 aa3.88□□□□□ -1.79
SGN1YIR001C TIF34P40217 347 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C RPT2P40327 437 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C DUG1P43616 481 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C COQ5P49017 307 aa3.88□□□□□ -1.79
SGN1YIR001C PRP24P49960 444 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C MNN10P50108 393 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C YGL140CP53120 1219 aa3.88□□□□□ -1.79
SGN1YIR001C RSC1P53236 928 aa3.88□□□□□ -1.79
SGN1YIR001C AQR1P53943 586 aa3.88□□□□□ -1.79
SGN1YIR001C ORC3P54790 616 aa3.88□□□□□ -1.79
SGN1YIR001C DOS2P54858 310 aa3.88□□□□□ -1.79
SGN1YIR001C GPD1Q00055 391 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SGN1YIR001C PIR3Q03180 325 aa3.88□□□□□ -1.79
SGN1YIR001C ARO80Q04052 950 aa3.88□□□□□ -1.79
SGN1YIR001C PPM1Q04081 328 aa3.88□□□□□ -1.79
SGN1YIR001C CSR1Q06705 408 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C SIL1Q08199 421 aa3.88□□□□□ -1.79
SGN1YIR001C OPI10Q08202 246 aa3.88□□□□□ -1.79
SGN1YIR001C RSB1Q08417 382 aa3.88□□□□□ -1.79
SGN1YIR001C PUS7Q08647 676 aaKnown RBP3.88□□□□□ -1.79
SGN1YIR001C NDD1Q08887 554 aa3.88□□□□□ -1.79
SGN1YIR001C HMI1Q12039 706 aa3.88□□□□□ -1.79
SGN1YIR001C VPS54Q12071 889 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 90 ms