RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeastyeast

Gene RPB5, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB5YBR154C MNT2P53059 558 aa3.37□□□□□ -1.87
RPB5YBR154C UBP16Q02863 499 aa3.37□□□□□ -1.87
RPB5YBR154C PLM2Q04383 521 aa3.37□□□□□ -1.87
RPB5YBR154C YOR378WQ08902 515 aa3.37□□□□□ -1.87
RPB5YBR154C GET3Q12154 354 aaKnown RBP3.37□□□□□ -1.87
RPB5YBR154C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
RPB5YBR154C UBX3Q12229 455 aa3.37□□□□□ -1.87
RPB5YBR154C ARG1P22768 420 aa3.36□□□□□ -1.87
RPB5YBR154C GPP2P40106 250 aaKnown RBP3.36□□□□□ -1.87
RPB5YBR154C GRS2Q06817 618 aa3.36□□□□□ -1.87
RPB5YBR154C LYS21Q12122 440 aaKnown RBP3.36□□□□□ -1.87
RPB5YBR154C LCB4Q12246 624 aa3.36□□□□□ -1.87
RPB5YBR154C AMD2P22580 549 aa3.35□□□□□ -1.87
RPB5YBR154C RRP43P25359 394 aaPredicted RBP3.35□□□□□ -1.87
RPB5YBR154C PET309P32522 965 aaPredicted RBP3.35□□□□□ -1.87
RPB5YBR154C SSP120P39931 234 aaKnown RBP3.35□□□□□ -1.87
RPB5YBR154C IDS2P46958 469 aa3.35□□□□□ -1.87
RPB5YBR154C SPC105P53148 917 aa3.35□□□□□ -1.87
RPB5YBR154C YML119WQ03208 357 aa3.35□□□□□ -1.87
RPB5YBR154C DSE3Q08729 430 aa3.35□□□□□ -1.87
RPB5YBR154C CWC2Q12046 339 aaPredicted RBP3.35□□□□□ -1.87
RPB5YBR154C RTC1Q08281 1341 aa3.35□□□□□ -1.87
RPB5YBR154C YPT1P01123 206 aaKnown RBP3.34□□□□□ -1.87
RPB5YBR154C KGD2P19262 463 aaPredicted RBP3.34□□□□□ -1.87
RPB5YBR154C DAL3P32459 195 aa3.34□□□□□ -1.87
RPB5YBR154C SAP1P39955 897 aaKnown RBP3.34□□□□□ -1.87
RPB5YBR154C SLD3P53135 668 aa3.34□□□□□ -1.87
RPB5YBR154C HOL1P53389 586 aa3.34□□□□□ -1.87
RPB5YBR154C YDL242WQ07746 117 aa3.34□□□□□ -1.87
RPB5YBR154C YER175W-AQ8TGU4 54 aa3.34□□□□□ -1.87
RPB5YBR154C URA3P03962 267 aa3.33□□□□□ -1.88
RPB5YBR154C STB5P38699 743 aa3.33□□□□□ -1.88
RPB5YBR154C GND1P38720 489 aaKnown RBP3.33□□□□□ -1.88
RPB5YBR154C EMP65P40085 556 aa3.33□□□□□ -1.88
RPB5YBR154C YAT1P80235 687 aa3.33□□□□□ -1.88
RPB5YBR154C RAD34Q06665 692 aa3.33□□□□□ -1.88
RPB5YBR154C COX11P19516 300 aaKnown RBP3.32□□□□□ -1.88
RPB5YBR154C PRP45P28004 379 aaPredicted RBP3.32□□□□□ -1.88
RPB5YBR154C STL1P39932 569 aa3.32□□□□□ -1.88
RPB5YBR154C YIL152WP40455 235 aa3.32□□□□□ -1.88
RPB5YBR154C GSM1P42950 618 aa3.32□□□□□ -1.88
RPB5YBR154C ORC5P50874 479 aa3.32□□□□□ -1.88
RPB5YBR154C YNL144CP53907 740 aa3.32□□□□□ -1.88
RPB5YBR154C YML053CQ04978 212 aa3.32□□□□□ -1.88
RPB5YBR154C NDD1Q08887 554 aa3.32□□□□□ -1.88
RPB5YBR154C YPL191CQ08930 360 aa3.32□□□□□ -1.88
RPB5YBR154C RRI1Q12468 440 aa3.32□□□□□ -1.88
RPB5YBR154C GAL4P04386 881 aa3.31□□□□□ -1.88
RPB5YBR154C CNA1P23287 553 aa3.31□□□□□ -1.88
RPB5YBR154C SWC3P31376 625 aa3.31□□□□□ -1.88
RPB5YBR154C RTT107P38850 1070 aa3.31□□□□□ -1.88
RPB5YBR154C EAF5P39995 279 aa3.31□□□□□ -1.88
RPB5YBR154C NIT2P47016 307 aa3.31□□□□□ -1.88
RPB5YBR154C YPT11P48559 417 aa3.31□□□□□ -1.88
RPB5YBR154C YNR071CP53757 342 aa3.31□□□□□ -1.88
RPB5YBR154C ECM22Q05958 814 aaPredicted RBP3.31□□□□□ -1.88
RPB5YBR154C PFA4Q12006 378 aa3.31□□□□□ -1.88
RPB5YBR154C CTT1P06115 562 aa3.3□□□□□ -1.88
RPB5YBR154C SES1P07284 462 aaKnown RBP3.3□□□□□ -1.88
RPB5YBR154C ILV2P07342 687 aaKnown RBP3.3□□□□□ -1.88
RPB5YBR154C SEC18P18759 758 aaKnown RBP3.3□□□□□ -1.88
RPB5YBR154C YCR061WP25639 631 aa3.3□□□□□ -1.88
RPB5YBR154C MSS51P32335 436 aa3.3□□□□□ -1.88
RPB5YBR154C ARC40P38328 384 aaKnown RBP3.3□□□□□ -1.88
RPB5YBR154C VBA2P38358 474 aaKnown RBP3.3□□□□□ -1.88
RPB5YBR154C VPS8P39702 1274 aa3.3□□□□□ -1.88
RPB5YBR154C VFA1P40080 203 aa3.3□□□□□ -1.88
RPB5YBR154C MAD2P40958 196 aa3.3□□□□□ -1.88
RPB5YBR154C YJL107CP42947 387 aa3.3□□□□□ -1.88
RPB5YBR154C GIS2P53849 153 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPB5YBR154C ARA2Q04212 335 aa3.3□□□□□ -1.88
RPB5YBR154C MLH2Q07980 695 aa3.3□□□□□ -1.88
RPB5YBR154C TRE2Q08693 809 aa3.3□□□□□ -1.88
RPB5YBR154C Q0010Q9ZZX9 128 aa3.3□□□□□ -1.88
RPB5YBR154C YCR043CP25361 127 aa3.29□□□□□ -1.88
RPB5YBR154C RPF2P36160 344 aaKnown RBP3.29□□□□□ -1.88
RPB5YBR154C ARO9P38840 513 aaPredicted RBP3.29□□□□□ -1.88
RPB5YBR154C TES1P41903 349 aaKnown RBP3.29□□□□□ -1.88
RPB5YBR154C YGL081WP53156 320 aa3.29□□□□□ -1.88
RPB5YBR154C TRI1Q05024 226 aa3.29□□□□□ -1.88
RPB5YBR154C YLR281CQ05863 155 aa3.29□□□□□ -1.88
RPB5YBR154C PEX15Q08215 383 aa3.29□□□□□ -1.88
RPB5YBR154C RTK1Q12100 620 aaPredicted RBP3.29□□□□□ -1.88
RPB5YBR154C SIP1P32578 815 aa3.28□□□□□ -1.88
RPB5YBR154C TAF5P38129 798 aa3.28□□□□□ -1.88
RPB5YBR154C ARN1P38731 627 aa3.28□□□□□ -1.88
RPB5YBR154C MET30P39014 640 aa3.28□□□□□ -1.88
RPB5YBR154C ERV46P39727 415 aa3.28□□□□□ -1.88
RPB5YBR154C YIL169CP40442 995 aa3.28□□□□□ -1.88
RPB5YBR154C SAD1P43589 448 aa3.28□□□□□ -1.88
RPB5YBR154C YMR034CQ05131 434 aaPredicted RBP3.28□□□□□ -1.88
RPB5YBR154C GSH2Q08220 491 aa3.28□□□□□ -1.88
RPB5YBR154C DIN7Q12086 430 aa3.28□□□□□ -1.88
RPB5YBR154C PSF3Q12146 194 aa3.28□□□□□ -1.88
RPB5YBR154C PHO2P07269 559 aa3.27□□□□□ -1.89
RPB5YBR154C PTC6P25646 442 aa3.27□□□□□ -1.89
RPB5YBR154C NIC96P34077 839 aa3.27□□□□□ -1.89
RPB5YBR154C RKM3P38222 552 aa3.27□□□□□ -1.89
RPB5YBR154C YGL260WP53056 76 aa3.27□□□□□ -1.89
RPB5YBR154C CRF1Q04930 467 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms